Conserved Protein Domain Family
APC_u5
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pfam16630: APC_u5 (this model, PSSM-Id:318771 is obsolete and has been replaced by 406923)
Unstructured region on APC between 1st and 2nd catenin-bdg motifs
APC_u5 is a short region of natively unstructured sequence lying between the first and the second 15-residue beta-catenin binding motifs, APC_15aa, pfam05972, on APC or adenomatous polyposis coli proteins in higher eukaryotes. The function is not known.
Links
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Statistics
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PSSM-Id: 318771
Aligned: 8 rows
Threshold Bit Score: 153.15
Created: 30-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
XP_015193222 1018 LNSGRQSPSQNERWARPKHLVEDEMKRNDQKSVRSQNQAYQMYTES---TsdsEEKHMKYQSRFVQPECPGGF-R-RSSn 1092 spotted gar
BAH11802     1018 LNSGRQSPSQNERWARPKHIIEDEIKQSEQRQSRNQSTTYPVYTES---T---DDKHLKFQPHFGQQECVSPY-RsRGAn 1090 human
XP_016279217 1001 LNSGRQSPSQNDRWARPKHVIEDEIKQNEQRQARGQNTPFSAYSES---T---DDKHMKFQSRFGQQECVSPY-RsRGAs 1073 gray short-ta...
XP_005155580 1004 LNSGRQSPSQNERWARPK-LLDDEMKRPDQKPPRSQSPGYPMYTEGsseG---EDKPKKYQPRFVQQDL-PAF-RsRGSn 1077 zebrafish
XP_015461559  983 LNSGRQSPSQNERWARPK-TLEEEIKRSEQKPPRSQSPGYPMYPEGnteS---EDKRKKFQPRFVQQDMSGGF-RqRGPn 1057 Mexican tetra
XP_002936457 1036 LNSGRQSPSQNERWARPKHIIDSEMKQSEQRQPRTTKTTYSSYTEN---K---EEKHKKFPPHFNQPENAPAYaRsRGTn 1109 western clawe...
XP_008112221 1035 LNSGRQSPSQNERWARPKHIIEEEIKQSEQRQSRSQSGAYPVYTEG---G---DNKHLSYPSAFGQPECVSPF-RsRDSs 1107 green anole
XP_004949342 1024 LNSGRQSPSQNERWARPKHIIDDEMKQNDQRQSRSQSATYPVYTES---G---DDKHMKYQSPFGQQDCVPSF-RsRGSn 1096 chicken

XP_015193222 1093 -sSEQSRGSSSHGMNKKISQPMCPVDDY 1119 spotted gar
BAH11802     1091 -gSETNRVGSNHGINQNVSQSLCQEDDY 1117 human
XP_016279217 1074 -gSEQNRVSSGHGINQKVNQSLCHEDDY 1100 gray short-tailed opossum
XP_005155580 1078 ---EQISSGSSHGLNKKISQTICSVDDY 1102 zebrafish
XP_015461559 1058 ---EQSSSGSSHGMTKKISQTICTVDDF 1082 Mexican tetra
XP_002936457 1110 nqADQSRVGSNLSNNSKASKPHCQVDDY 1137 western clawed frog
XP_008112221 1108 -tSEQNRTGCSHGINQKVNQSLRQVDDY 1134 green anole
XP_004949342 1097 -gSDQNRVGSTLGINQKVNQSLCQVDDY 1123 chicken
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