3JBR


Conserved Protein Domain Family
VWA_N
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pfam08399: VWA_N (this model, PSSM-Id:312040 is obsolete and has been replaced by 462464)
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VWA N-terminal
This domain is found at the N-terminus of proteins containing von Willebrand factor type A (VWA, pfam00092) and Cache (pfam02743) domains. It has been found in vertebrates, Drosophila and C. elegans but has not yet been identified in other eukaryotes. It is probably involved in the function of some voltage-dependent calcium channel subunits.
Links
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Statistics
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PSSM-Id: 312040
Aligned: 50 rows
Threshold Bit Score: 57.365
Created: 22-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
3JBR_F        112 AHQW--REDFASNEVVYYNAKDDldpekndsepgsQRIKPVFIDDANFR-RQVSYQHAAVHIPTDIYEGSTIVLNELNWT 188  rabbit
XP_005451718  129 DHEY--NETLE---FDYYNSMLIntvded-gnpvpLGGEFPLEENEHFNkLPVNIQQSNIQVPTNVYNRDPDILNGVFMS 202  Nile tilapia
XP_011605448   98 YHEF--NASLK---FDYYNSMMIntvdedg-nsmelggEFPLEENQHFNnIPVNTQQSNIQVPTNVYNKDPIILNAIYNT 171  torafugu
XP_011612209  119 qHEE--NPELQ---YEYFNAVLInevdemg-nnvelggEFLLEPNDHFNnLSVNVSLSVVQVPTNMYNKDPDIVNGVYWS 192  torafugu
XP_012627090  119 KHEF--DADLQ---YEYFNAVLInerdkdg-nflelgKEFILAPNDHFNnLPVNISLSDVQVPTNMYNKDPAIVNGVYWS 192  gray mouse lemur
XP_011474060  112 YHEY--NATME---FDYYNSMLIntvdedg-nnvelggEFPLEENEHFNnLPVNTLQSDIQVPTNVYNKDPNILNSIYNT 185  Japanese medaka
XP_009296274  112 YHEF--NSSLQ---FDYFNALLVntmdeeg-nfielggEFPLEENNHFSkLAVNTLMSDIQVPTNVYNKDPDILNGVYMS 185  zebrafish
XP_002112661  102 DYKY--NDSLKPGDVQWYNAKKIq----------lNSTDPVFICNDRFQ-RSVNANISAIQVPTNVYDGGVNVLNAIEWS 168  Trichoplax ad...
XP_002123859  121 KYDWdkEPSDEYNNIQYINApepsnie--eddyasLRKQMQFKSDARFE-RDVNKNTSIVQVPFNVYSKGTKLLKSVGWS 197  vase tunicate
CDQ85383      125 ksrdvfqdphlhvesksgpegfpscsrsrslslsslslsppsppllslslslslslslslspxxdlgvlilptvykltsl 204  rainbow trout

3JBR_F        189 SaLDDVFKKNREEDPSLLWQVFGSATGLARYYPASPW 225  rabbit
XP_005451718  203 EaLNDVFADNFQEDPTLTWQYFGSSTGFFRLYPGIQW 239  Nile tilapia
XP_011605448  172 EaLNDVFISNFLKDPTLTWQYFGSSTGFFRIYPGIKW 208  torafugu
XP_011612209  193 EaLNKVFVDNFERDPTLTWQYFGSAKGFFRQYPGVKW 229  torafugu
XP_012627090  193 EsLNKVFVDNFDRDPSLIWQYFGSAKGFFRQYPGIKW 229  gray mouse lemur
XP_011474060  186 EaLNDVFISNFQKDPTLTWQYFGSSYGFFRIYPGIKW 222  Japanese medaka
XP_009296274  186 EaLNDIFINNFQKDPTLTWQYFCSQTGFFRLYPGIRW 222  zebrafish
XP_002112661  169 NaVDAQFNKNYYSDKTIKWQYFGSATGFFRLHPGAIW 205  Trichoplax adhaerens
XP_002123859  198 KaLNQQFKRNLELEPSLKWQYFGSTEGYIRVYPGFQW 234  vase tunicate
CDQ85383      205 slssvVLADNLKSNPGIKWQYFSSEEGIFTVFPAHKF 241  rainbow trout
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