Conserved Protein Domain Family
Ndc80_HEC

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pfam03801: Ndc80_HEC (this model, PSSM-Id:309070 is obsolete and has been replaced by 461058)
HEC/Ndc80p family
Members of this family are components of the mitotic spindle. It has been shown that Ndc80/HEC from yeast is part of a complex called the Ndc80p complex. This complex is thought to bind to the microtubules of the spindle.
Statistics
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PSSM-Id: 309070
Aligned: 50 rows
Threshold Bit Score: 136.588
Created: 17-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q6CNF3        71 SMRQSLRN--SlprssigpqQQQQMNSTQNSTYHNTARDP--RPLRDKNF-----------------QNLLQQEIFSYLT 129 Kluyveromyces l...
OAJ42306      67 gRQSMGFG--G---------RPSLSSVSLSGQASSITKDP--RPLKEKQW-----------------QTKAIKQLVSFLA 116 Batrachochytriu...
EJW04267      10 QSRHSVNP--N---------TSRASFIEEPRR-----RDL--KHLRDKST-----------------INCSIQHLETFLK 54  Edhazardia aedi...
CCD80418      25 ERKSRMTG-------------IPSNIKARTSSVGPQEQKPvnREVKSKAN-----------------ITKMIGSLIQFLE 74  Schistosoma man...
KMZ92161      36 KSRTSLNA---------------LSFYKSSASVYVKK--------VDKTD-----------------KKENVKTLIRYLG 75  Plasmodium viva...
NP_001003863  49 eRRTSFFGk-Gigag--gqrNSMFGSYGGSEKM----KDP--RALHDKAF-----------------VQQCIKQLYEFLV 102 zebrafish
XP_003974826  53 ERRTSFFGprTsgas--mprNSTMSGFGGTEKI----KDS--RPLHDKSF-----------------VQQCIRQLHEFLT 107 torafugu
XP_002877991  28 QQRHLFNS-----------------------------RDS------DASFassrpssiglggrasddRSSMIRFINAFLS 72  Arabidopsis lyr...
XP_009518977  49 vstaaghtarrppagprasmnarhSRASVSGRGGARVLDP--RPVSDRSY-----------------LNSCVQALVEFLS 109 Phytophthora sojae
XP_002177760  85 SRRSSFAGp-----------DRRRSLLPPSSSSASAKVDP--RPINDKSF-----------------QHNCSKALLTFLQ 134 Phaeodactylum t...
Q6CNF3       130 DQKFDve-----------tnHPISLKS--LKQ----PTQKDFIYMFKWLYLRLDPGYVF---T-K-SLEHEVYSILRTIH 187 Kluyveromyces l...
OAJ42306     117 QTGCP---------------VPISAKK--LTA----PSSKDFADVFKFLYRKLEPNHEF---K-S-KIEEELLSLLRTLR 170 Batrachochytriu...
EJW04267      55 AHSFTanptnyrqtinatynSQVTQNSkpLFNnpmcPSAKEVSSIFLFLFRFFDANFAF---N---KYEDDVINFMKILR 128 Edhazardia aedi...
CCD80418      75 TTDYS---------------NSLSPKI--LHS----PNSKEIFSIFEHLVRQVEPSFRIendG-M-KAEEVCLNYLKILG 131 Schistosoma man...
KMZ92161      76 WKNYS---------------GSISPNL--FKN----PSMTDLINIWNFIFKHVDPQIEV---N-KdNYGEVVLSFYKDIG 130 Plasmodium viva...
NP_001003863 103 DRGFP---------------GSITVKA--LQS----PSTKEFLKIYEFIYNFLEPSFQM---PtA-KVEEEIPRMLKDLG 157 zebrafish
XP_003974826 108 EQGYT---------------GTLSSKT--LQS----PSTKEFVKVFEFIYRQLDPTFEM---PtS-KVEEEVPAILKSLR 162 torafugu
XP_002877991  73 SHN-----------------SLISIRA--NPV----PSVKDISETLKFILSKLD--YPC---DsI-KWDEDLVFFLKSQK 123 Arabidopsis lyr...
XP_009518977 110 DRMYD---------------QTLSPAL--LKRg---PSKKDFCNMILFLFKQVDPTFEF---G-V-KFEEDVVLQFRNLR 164 Phytophthora sojae
XP_002177760 135 ESGYD---------------YPISTKT--LAR----PSGKDFANIVSFLLGQVDPEFSK---GnV-KFEDEVAMNFKAMG 189 Phaeodactylum t...
Q6CNF3       188 YPYLATINKSQISAVGGSN-WPKFVGMLHWLViinkK-LDECLEHLDVSINNQV 239 Kluyveromyces lactis NRRL Y-1140
OAJ42306     171 YPFAEQINKSQLFSIGSPHaWPTFLGILHWLMe---E-IMCCIEFDEQSQIDDN 220 Batrachochytrium dendrobatidis JEL423
EJW04267     129 YPFISELNKSQFIAV-TPHtWPILLAALVWII----G-LIEFYDTLIDKISKDS 176 Edhazardia aedis USNM 41457
CCD80418     132 YPNI--LSKHHLLAPGAPQaWNSVLAAFDWFRe---E-TENANDAINFSVFRYD 179 Schistosoma mansoni
KMZ92161     131 YPY--TISKSTLVAPTTGLqYNTHLSALAWLC----QlLIFEAECFNDINEEKD 178 Plasmodium vivax Mauritania I
NP_001003863 158 YPFA--LSKSSMYSIGAPHtWPLALGALIWLM----D-AVKLFGGQREQDLLFS 204 zebrafish
XP_003974826 163 YPFV--LSKSSMYSVGAPHtWPQALGALMWLI----D-NVKIKWSLSKQELLFS 209 torafugu
XP_002877991 124 CPFK--ITKSSLKAPNTPHnWPTVLAVVHWLV----E-LARFHQHLSSNSTSEP 170 Arabidopsis lyrata subsp. lyrata
XP_009518977 165 YPIP--ISKTSLAAVGTPHtWPTLLLSISWLI----E-LLSYDEAIQQANETEQ 211 Phytophthora sojae
XP_002177760 190 YPYP--ISKTALVAAGSPHtWPSLLAALHWLM----EhLVIAKEARSEEMDETK 237 Phaeodactylum tricornutum CCAP 1055/1
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