4L18


Conserved Protein Domain Family
Runt

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pfam00853: Runt (this model, PSSM-Id:307137 is obsolete and has been replaced by 459963)
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Runt domain
Statistics
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PSSM-Id: 307137
Aligned: 23 rows
Threshold Bit Score: 235.325
Created: 13-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4L18_A        11 H-PGELVRTDSPNFLCSVLPT-----HWRCNKTLPIAFKVVALG--DVPDGTLVTVMAGNDENYSAELRNATAAMKNQVA 82  house mouse
Q26628        65 Y-PGELVKTESPNFACSVLPN-----HWRCNKSLPVAFKVVSLG--ETKDGTMVTIAAGNDENYCAELKNNTAVMKNQVA 136 purple sea urchin
XP_009009581  88 hqhhRLMRTGSPNVICSELPE-----HWRSNKQLRFKFKVVILG--KVKDGTMVTLSAANENNEKAELRNYAAYVTNQVA 160 Helobdella robusta
XP_002122046 351 H-QGELIKTDSPNFLCTPLPQ-----HWRVNKSLQTPFKVVALS--DIPDGTTVTVMAGNDENYSAELRNASATMKGCVA 422 vase tunicate
XP_013768444  46 P-PRGLVPTDSPNFLCSSLPQ-----HWRCNKTLPRAFTVVALGn-DVPDGVAVTVMAGNDENVSAELRNATATMKQGCA 118 Pundamilia nyer...
ACF96957       9 Y-PGELVTTDSPNFVCTILPS-----HWRCNKTLPVPFKVLSLS--DITDGTKVILTAGNDENSAAELRNAIATFKNQVA 80  Amphimedon quee...
Q9Z2J9        75 kkggtmasnslfSAVTPCQQSffwnkTLPVA---F---KVVALG--EVPDGTVVTVMAGNDENYSAELRNASAVMKNQVA 146 Norway rat
XP_015370253  22 H-GKEMVATGSPSVFCSVLPG-----HWRSNKSLPIPFKVVVLD--EVPDGAVVVVQAGNDENPSADMRNYRALSATGIA 93  Russian wheat a...
EUB64088      19 H-AGDLVVTGSPHLLCSSLPK-----HWRSNKSLPTPFRVVSLV--PVPDGTRVVLSAGNEERPFAELKNAVAVMQNQEA 90  Echinococcus gr...
AAS21356      51 HgHTEMTKTDSPNFTCTQLPV-----HWRKNKSLPAPFKIVAMDpiTVPDGTQVTIYAGNDEEHSAELRNNTTTFKNNVA 125 Oikopleura dioica
4L18_A        83 RFNDLRFVGRSGRGKSFTLTITVFTNPPQ---VATYHRAIKITVDGPREPRRH 132 house mouse
Q26628       137 RFNDLRFVGRSGRGKSFTLSIFIYTNPPQ---IATYNRAIKVTVDGPREPRRP 186 purple sea urchin
XP_009009581 161 VFNDLRFIGRSGRGKHLHITITIHSAPVQ---VAMYLNAIKVTIDGPRMPRSE 210 Helobdella robusta
XP_002122046 423 RFNDLRFLGRSGRGKSFNLTITIFSSPPQ---VATYQRAIKITVDGPREPRRH 472 vase tunicate
XP_013768444 119 HFNDLRFIGRSGRGKSFTLTINVLTSPPQ---IATLHRAIKITVDGPRLPRRQ 168 Pundamilia nyererei
ACF96957      81 RFNDLRFVGRSGRGKMLTVTITIVTEPVQ---YATYSHAIKVTVDGPREPR-- 128 Amphimedon queenslandica
Q9Z2J9       147 RFNDLRFVGRSGRGKSFTLTITVFTNPPQ---VATYHRAIKVTVDGPREPRRH 196 Norway rat
XP_015370253  94 VFNDLRFVGRSGRGKLLTLTITVQCKD-QavlVANYVKAIKITVDGPRLPRSN 145 Russian wheat aphid
EUB64088      91 RFNDLRFLGRSGRGKSFNVTITVETNPPQ---VGTYSHAIKVTVDGPRVPRNK 140 Echinococcus granulosus
AAS21356     126 RFNDLRFIGRSGRGKTFNLTLMVATNPPQ---IAVYHRAIKITVDGPREPRSE 175 Oikopleura dioica
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