1IKN,1AP7,1AWC,1DCQ,1G3N,1K1B,1SW6


Conserved Protein Domain Family
ANK
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cd00204: ANK (this model, PSSM-Id:29261 is obsolete)
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ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Links
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Statistics
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PSSM-Id: 29261
Aligned: 342 rows
Threshold Bit Score: -1
Created: 24-May-2001
Updated: 10-Jan-2006
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
1IKN_D   39 NFQN----NLQQTPLHLAVITNQp---eIAEALLGAGCdp---------------eLRDFRGNTPLHLACEQGCl----- 91  human
123522   96 GYSN----INDFNIFTYMKSKNVdi--dLIKVLVEHGFdf---------------sVKCEKHHSVIENYVMTDDpv---- 150 Cowpox virus
137486   58 NLFHi--lEYGENILHIYSMDDA-----NTNIIIFFLDr----------------vLNINKNGSFIHNLRLSSSini--- 111 Vaccinia virus (stra...
137543  407 NKID----KHGCSILYHCIKSHSv---sLVEWLIDNGAdi---------------nIITKYGFTCITICVILADkyipei 464 Vaccinia virus (stra...
137552  204 CMYNs---DMCKNSLHYYISSHRes-qsLSKDVIKCLInnnv-----------sihGRDEGGSLPIQYYWSFSTid---- 264 Vaccinia virus (stra...
321379  143 DVKD----VYGHNLLHLYLKSPYpk-lsIIKLLLDHGVdi--------------naKTRMHRHTPLHIYLMNSHmd---- 199 Rabbit fibroma virus
465059   47 YDLNrrqpVTGYTALHCYLYNNYft-ndVLKVLLNHGVdv---------------tIKPSSGHMPIYILLTRCCn----- 105 Variola virus
1808606 216 RYENs---DKYSSNIFSVYFKAHnt--iGIDIKLVKWMitkg----------vdinYKNEYGSGILHTYLGNMYvd---- 276 Cowpox virus
3097049 371 ATMDk--tTDNNYPLHDYFVNNNlvdvnVVRFIVENNGhmavnhvsnngrlcmyglILSRFNNCGYHCYETILId----- 443 Cowpox virus
9802990 204 KGIEai-rILLKSALHFALLSGNh---dLVKFMIANGSnv--------------nmDEKYEKPSPIDIAVLKDDp----- 260 Caenorhabditis elegans

1IKN_D   92 -----aSVGVLTQscttph------------lhsilKATN--YNGH---TCLHLASIHGy-----------LGIVELLVs 138 human
123522  151 ----peIIDLFIEngcsviyededdeygyayeeyhsQNDD--YQPRncgTVLHLYIISHlysesdsrscvnPEVVKCLIn 224 Cowpox virus
137486  112 ----keYVYQLVNndhp---------------dnriRLML--ENGRr--TRHFLSYISDt----------vNIYICILIn 158 Vaccinia virus (stra...
137543  465 aelyikILEIILSklpti--------------ecikKTVD--YLDDh-rYLFIGGNNKSl----------lKICIKYFIl 517 Vaccinia virus (stra...
137552  265 ----ieIVKLLLIkdv-----------------dtcRVYD--VSPIleaYYLNKRFRVTpyn-------vdMEIVNLLIe 314 Vaccinia virus (stra...
321379  200 ----kkVVEFLLRng--------------------aDINY--GNYE---TPLGTLFSHCs----------sFKLIKSITt 240 Rabbit fibroma virus
465059  106 -----iSHNVVIDminkdk-----------thlshkDYSNllLEYI---KSRYMLLKEEdi---------dENIVSTLLd 157 Variola virus
1808606 277 ----tdVLELLCRsg--------------------kNINE--QNNHl-iTPLHSYLRRDe-----------SISASVLKk 318 Cowpox virus
3097049 444 ------VFDILSKymd------------------diDMID--NENK---TLLYYAVDVNn-----------IQFAKRLLe 483 Cowpox virus
9802990 261 -----hLLKIVLDaga------------------npNAVH--TYIG---SCLHLASCSSl-----------LNQYQIVEl 301 Caenorhabditis elegans

1IKN_D  139 lg-------------------------------advNAQEpCNGR-TALHLAVdl-------------qnPDLVSLLL 171 human
123522  225 hg-------------------------------inpSSID-KNYC-TALQYYIkss-----------hidIDIVKLLM 258 Cowpox virus
137486  159 hg-------------------------------fyiDAED-SYGC-TLLHRCIyhykks------esesyNELIKILL 197 Vaccinia virus (strain...
137543  518 vdykyt------------------------csmypsYIEF-ITDCeKEIADMRqikin--------gtdmLTVMYMLN 562 Vaccinia virus (strain...
137552  315 rrhtlvdvmrsitsydsreynhyiidnilkrfrqqdESIVqAMLI-NYLHYGDmvvrcm------ldngqQLSSARLL 385 Vaccinia virus (strain...
321379  241 kl--------------------------------leYGADiNFPA-ASGHSAMmsy-----------linNPDATVHP 274 Rabbit fibroma virus
465059  158 kg--------------------------------idPNFK-QDGY-TALHYYYlclahvykpgecrkpitIKKAKRII 201 Variola virus
1808606 319 vie-----------------------------lgadRNLRcCMKL-TPIMTYIiy-------------naMNIDEEII 353 Cowpox virus
3097049 484 yg-------------------------------anvNATSlSIIN-TAIQKSSyrr------------enKTKLVDLL 517 Cowpox virus
9802990 302 llehga------------------------dmnlqhQFPDgSRLK-SPFVEYFrsn-----------dsiDAKVVKLF 343 Caenorhabditis elegans
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