Conserved Protein Domain Family
SYCE1
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pfam15233: SYCE1 (this model, PSSM-Id:291886 is obsolete and has been replaced by 464575)
Synaptonemal complex central element protein 1
This family of proteins includes synaptonemal complex central element protein 1, a component of the synaptonemal complex involved in meiosis, and synaptonemal complex central element protein 1-like, which may be involved in meiosis.
Links
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Statistics
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PSSM-Id: 291886
Aligned: 15 rows
Threshold Bit Score: 115.722
Created: 1-Jul-2015
Updated: 5-Aug-2015
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
Q5D525        50 QIEDLIHRINELQQgpAKKRSSEELGEAQALQEAMHRELDSLNEERVHLEEVLRKKQEAVSILKKHPQERDSDTPHLD-- 127 house mouse
Q9D495        54 RIEVLINRINEVQQ--AKKKASEELGEAQTVWDNLQKELDLLREEKVRLKDILNRKEETLRIMQLHCQEKESEAQRKH-- 129 house mouse
XP_005320911  51 QIEVLINRINEVQQ--AKKKASEELGEARTVWDALQKELDSLHEEKVHLKEILSKKQESLRILRLHCQEKESEAQRKHtl 128 thirteen-lined ...
AAH34821      16 RVEVLINRINEVQQ--AKKKANKDLGEARTICEALQKELDSLHGEKVHLKEILSKKQETLRILRLHCQEKESEAHRKHtm 93  human
XP_009292714 488 KPEELITQLRKLQQ--VKKILEEEVTEVMLLKCARKQEEDALAAEALKLEGTLNAKEELNRSLQLKCEDLQLEAQRQLeq 565 zebrafish
XP_007663249  47 RIEDLIIKIKDLQR--VRKNANEELLKTRAHSEALQRELDELNAEKAHLEEILNQKQETLMMLRLQCEEKQAEAQRQQev 124 platypus
XP_010812678  49 QIEDLINRIHELQQ--AKEKSSEELGEAQALWEALRRDLDSLNGEKVHLEEVLSRKQEALRTLQLYCQRKAEEVQRNYml 126 cattle
XP_511117     47 QIEDLISRINELQQ--AKKKSNEELRETHSLWEALHRELDSLNGEKVHLEEVLGKKQEALRILQMHCQEKESEAQR---- 120 chimpanzee
XP_006001503  46 RIEELVKKLKQLQQ--GKNAVDEELCEARKCREALQKELDKLSAESFHLEEIYNKKKETLQLLQFQYKERENEIKRQLnh 123 coelacanth
XP_008255860  46 QIEDLINRINELQQ--AKK-SSEEVGEAQALWEALRRELDSLNAEKAHLEEVLNKKQEALWMLQLHCQEKESEAQR---- 118 rabbit

Q5D525       128 -------------------------A---------------------------QQLEERLADLARQHKDLWEFHVlQQRL 155 house mouse
Q9D495       130 -------------------------SmlqeckerisflnsqidkekaklrklrLDFEEHLETLMSQHKDTLEFHK-PEHL 183 house mouse
XP_005320911 129 lqeckerifalnsqieeeknkqrqlR---------------------------LDFEEQLEALMGQHKDLWEFHR-PEQL 180 thirteen-lined ...
AAH34821      94 lqdckerisalnlqieeeknkqrqlR---------------------------LAFEEQLEDLMGQHKDLWDFHM-PERL 145 human
XP_009292714 566 nhqkeelvkqysfqiqetklkhrkiR---------------------------MKFENQLQQLTEQHKNLSAVFA-PQRL 617 zebrafish
XP_007663249 125 sqgckqrieeltskiqeeklkqrkqR---------------------------MEFDQQLEEMMEKHKSLWEFHT-SESL 176 platypus
XP_010812678 127 aehteqisiqk--sqitetqgqrklG---------------------------LPMEEQLEDLIGPHKDLWEFQMlKRRL 177 cattle
XP_511117    121 -----------------------------------------------------LDVRGQLEDLMGQHKDLWEFHMlEQRL 147 chimpanzee
XP_006001503 124 segckqrveqitsqiqeeklkrrkqR---------------------------MEFEMQLEELMEKHKSTWEFHN-TESL 175 coelacanth
XP_008255860 119 -----------------------------------------------------LDVQGQLDDGMGQHKDLWEFHMlEERL 145 rabbit

Q5D525       156 AQEISTMEHRKDQLLAE 172 house mouse
Q9D495       184 TKEMCVLDSSKEQLLKE 200 house mouse
XP_005320911 181 AREICTLDSSKEQLLKE 197 thirteen-lined ground squirrel
AAH34821     146 AREICALDSSKEQLLKE 162 human
XP_009292714 618 PAEIQSAEYSTEQLLKa 634 zebrafish
XP_007663249 177 AREISNIEDSKKHLLNE 193 platypus
XP_010812678 178 AWEIRALQSSQEQLLTE 194 cattle
XP_511117    148 AREIRALERSKEQLLSE 164 chimpanzee
XP_006001503 176 KKEICNIENAKQQFLSE 192 coelacanth
XP_008255860 146 AREIGALRssqeqlqse 162 rabbit
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