Conserved Protein Domain Family
Tim54

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pfam11711: Tim54 (this model, PSSM-Id:288548 is obsolete and has been replaced by 463328)
Inner membrane protein import complex subunit Tim54
Mitochondrial function depends on the import of hundreds of different proteins synthesized in the cytosol. Protein import is a multi-step pathway which includes the binding of precursor proteins to surface receptors, translocation of the precursor across one or both mitochondrial membranes, and folding and assembly of the imported protein inside the mitochondrion. Most precursor proteins carry amino-terminal targeting signals, called pre-sequences, and are imported into mitochondria via import complexes located in both the outer and the inner membrane (IM). The IM complex, TIM, is made up of at least two proteins which mediate translocation of proteins into the matrix by removing their signal peptide and another pair of proteins, Tim54 and Tim22, that insert the polytopic proteins, that carry internal targetting information, into the inner membrane.
Statistics
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PSSM-Id: 288548
Aligned: 87 rows
Threshold Bit Score: 403.449
Created: 22-Jul-2015
Updated: 5-Aug-2015
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q0CR10        22 NPVWRMMGMPnfRLRLPSRNWMIFLTITGSFTAALIYDRREKRHAQQKWCDLVAHLSRDTLPVEQTRRKVTVYLAAPPGD 101 Aspergillus ter...
Q6BTN1        32 NPALRMMGIP--KISLPSRNWMIFWTLLASVGGGVAYDRYQQKQIRKKWMEKFEPLGEEAYRTDRIPRKLSVFIAPPPND 109 Debaryomyces ha...
EDK39798      27 sPALRMMGIP--RFSLPSRNWLIFWTVLAGIGGGIAYDKYEQKQIRAKWMKHVEHLSQEAYPNDRIPRKMSIFIAPPPDN 104 Meyerozyma guil...
XP_007377626  31 NPALRMMGIP--RLSLPSRNWMIFWTVLASIGGGIAYDKYQQKQIRAKWMEKVEPLSHVTYTTEKLPRKLTIYIAPPPND 108 Spathaspora pas...
CCE45404      33 NPALRMMGIP--RISLPSRNWLIFWSVLVGVGSSIAYDKYEQKQVRKKWMASVSHLSEEVYTNDRIPRKLTIYIAPPPND 110 Candida parapsi...
XP_002615422  36 NPALRAMGIP--RISLPSRNWMIFWSVLASIGGGIYYDKQQQKKIREKYMAQVEALSKEVYPTERLPRKVSVFIAPPPND 113 Clavispora lusi...
XP_001523795  38 NPALRMMGIk--RISLPSRNWMIFWSVVIGIGSLIAYDKYEQKQIRKKWMESVKHFGDEIYTNERIPRKLTIYIAPPPND 115 Lodderomyces el...
XP_002550915  15 NPALRMMGIP--RISLPSRNWMIFWTVVSTFGGAYAYDRYEQKQIRKKWMEAVQHYGEITYGVDKLPRKLTVYIAPAPND 92  Candida tropica...
XP_004197444  32 NPALRMLGLP--KVSLPSRNWMIFWTVLASFGGAIAYDRHEQKKIREEYMEKLSYLSKVPYSSDKIPRKISIFVAPPPND 109 Pichia farinosa...
XP_001383954   1 -----MMGIP--RFSLPSRNWMIFWTVLASIGGGIAYDKYEQKQVRKKWMAEVEHLSKQVYPQDRTPRKLTIYIAPPPDD 73  Scheffersomyces...
Q0CR10       102 GLRVARDHFKEYVKPILVAAALDYQVIEGRRQGEIRAALAERTRKLR-RKA-----------------GEPSSVVD---- 159 Aspergillus ter...
Q6BTN1       110 YLDSSMVYFRKYVKPLLNASAIDFDVFTENRQGDIRAAVAERIRELR-IETnenakk-----aqeeakQEQYDASW---- 179 Debaryomyces ha...
EDK39798     105 FLDVSMQYFRKYVKPVLNAAAVDYEVYSENRQGDIRASVAEKIRELR-RER-----------------SGVENTQS---- 162 Meyerozyma guil...
XP_007377626 109 FLDESLKLFKKFIKPVLNASALDFEIFSETRQGDIRSAVAQRIRNLR--QA-----------------QSEQPTEP---- 165 Spathaspora pas...
CCE45404     111 FLDSSLRIFRKFIKPVLNAGSVDFEIFSEGRQGDIRSSVAQRIRDLR-IKE-----------------LEKGKVVK---- 168 Candida parapsi...
XP_002615422 114 FLDQSMSHFRKYIKPLLNAAAIDFEVYTENRQGDIRSQVAERIRDLR-KQTv----------------EKQRQREE---- 172 Clavispora lusi...
XP_001523795 116 FLDESMKLFRKYIKPVFNAGCVDFEIFSENRQGDIRASVAQRIRDLR-IKA-----------------AGGQSNEEkdal 177 Lodderomyces el...
XP_002550915  93 FLDDSLKLFRKCIKPVLNAGVLDFEIFSESRQGDIRSTVAEKIRELR-RNNip--------------vAESKSEEK---- 153 Candida tropica...
XP_004197444 110 FLDESLKYFRKYVKPLLNASAIDFEVYTESKQGELRNAIADRIRELRsKRL-----------------QEKEKEVE---- 168 Pichia farinosa...
XP_001383954  74 FLDESLRLFRKFIKPVLNSASLDYEIFSESRQGDIRQSVAQKIRQMR-LDRldsgvdgvngagansvtEETNSKTW---- 148 Scheffersomyces...
Q0CR10       160 ----------------------Est---------------------------sTEDV-IADARSRIGVTEEPG------- 182 Aspergillus ter...
Q6BTN1       180 ----------------------Tkffkkdvpnf----------ftlkfqsnskEDEA-LVSSNDLYSPKDVLG------- 219 Debaryomyces ha...
EDK39798     163 ----------------------Dqnsrnnspkdmlas---fkkltggapksedDEEV-LVKRSDLYKVRDVLG------- 209 Meyerozyma guil...
XP_007377626 166 ----------------------Dvkpvvp-------------------vssgdAEEV-LVSRSDLYKAKDVLG------- 196 Spathaspora pas...
CCE45404     169 ----------------------Eskss-----------------------eiiEEPE-YVKRSDLYKPSDVLG------- 195 Candida parapsi...
XP_002615422 173 ----------------------Dakkeaynrswtkffk-edvrnlfkkapkkeEQEV-YVSRHDMYTPVDLLG------- 221 Clavispora lusi...
XP_001523795 178 atsqstttpvtpvtpftlaknnTpa---------------------------tDSEE-TVSRSTLYKPADVLG------- 222 Lodderomyces el...
XP_002550915 154 ----------------------Nsq---------------------------tNEEPeYKSRADLYKAKDVLGlykvfpg 184 Candida tropica...
XP_004197444 169 ----------------------NksavlggslwgsigdavtnfssffgskekpEIET-LTPVQDLYSPKDVIG------- 218 Pichia farinosa...
XP_001383954 149 ----------------------Tsfaggaklf-------------qksqsgeiEDEQ-LVKRSELYKPRDVMG------- 185 Scheffersomyces...
Q0CR10       183 --------------P---------------------------KGDLVIGRHTWKEYIRGLHEGWLGPLDPPLPPVPVEAT 221 Aspergillus ter...
Q6BTN1       220 --------------Lyylkepidak-------rddelnpmeaGGVICIGRGAYKEYMTGVHEGLLGPLEAPEEVRTITEV 278 Debaryomyces ha...
EDK39798     210 --------------Fyyfndtiyph-------rddeldpekaGGVICIGRGAFKEYMAGVHEGLLGPLEAPEPTVEKVSE 268 Meyerozyma guil...
XP_007377626 197 --------------Lykifpsevel-------hpedsdsdiaGGVVCIGRGAFKEYITGLHEGLLGPLTKPQFVIDEELK 255 Spathaspora pas...
CCE45404     196 --------------Lykifpqnidt-------vsddantdvaGGVVCIGRGAFKEYISGVHEGLLGPLQKPQAIADEEAR 254 Candida parapsi...
XP_002615422 222 --------------Lyrvaepvkpv-------rddendilhaGGVICVGRGTYKEYMNGVQEGLLGPLEKPAEPVPEPAA 280 Clavispora lusi...
XP_001523795 223 --------------LyrifpqkvdivsddstkegmdndnavaGGVVCIGRGAYKEYISGLHEGLLGPLVKPEAIAEEEAK 288 Lodderomyces el...
XP_002550915 185 tieiesedsvedvsP---------------------------GGIICIGRGAYKEYMTGVHEGLLGPLEKPENVKEEEEK 237 Candida tropica...
XP_004197444 219 --------------Fyldkeplavk-------redeidqkhaGGVICIGRGAFKEYMNGVHEGLLGPLTPPEPTSLIEDK 277 Pichia farinosa...
XP_001383954 186 --------------Lyrvfkpmeevk------sedeinpeeaGGVICIGRGAYKEYLAGVHEGLLGPLVKPQVLIEEEEQ 245 Scheffersomyces...
Q0CR10       222 PAPETDSSTTGSTDD------------------------APAPEHT---------------PEKTDTPEE---------- 252 Aspergillus ter...
Q6BTN1       279 DPQVTENEPETAHNDneskavvelpvlptddlpadsvdkQDAVPET---------------PSETAENTP---------- 333 Debaryomyces ha...
EDK39798     269 FKNEDGNSDATVSTEtka-------------------evAETTIDE---------------ETGETKEET---------- 304 Meyerozyma guil...
XP_007377626 256 AEQEL---------------------------------------------------------KEKAEQED---------- 268 Spathaspora pas...
CCE45404     255 RAEQKAKDKEENPSKysd-------------------ddDDEDNDN---------------------------------- 281 Candida parapsi...
XP_002615422 281 ELPEGENES-----------------------------------KA---------------EEVEDFGQK---------- 300 Clavispora lusi...
XP_001523795 289 RAEEHANDTSSNNG-------------------------------------------------------D---------- 303 Lodderomyces el...
XP_002550915 238 IELERKKKKEENPDDded-------------------dpNA--------------------------------------- 259 Candida tropica...
XP_004197444 278 SSTQDTKTDSVIPDGnpv-------------------kdSSNISEEikseestsstdsstvPSDVNKDQEtidektseea 338 Pichia farinosa...
XP_001383954 246 ARIAKEKEKEERIKE-----------------------------GK---------------PAEDLDDDD---------- 271 Scheffersomyces...
Q0CR10       253 -KKDEKPAKPTGPTPaYLAPAEYASRELPPS------------LPPSL-DGSVPVPFPHILGFLNTPIRLYRYLNQRALA 318 Aspergillus ter...
Q6BTN1       334 -NAEEGDNEKPVPKP-FITPDEYPNATYAPEfqnvslimnkknVPVIFeQPVYVFPLPIVSGFLNTHRKLYRFFTKRNVA 411 Debaryomyces ha...
EDK39798     305 ---------NPVPKP-FIRPEQYADAELAPEldtsrqvlndkkVPVLFeQPVYVFALPTIVGFTNTPRKIYRFFNQRYEA 374 Meyerozyma guil...
XP_007377626 269 -SDDEEPNLKPVPKP-WIKPEQYAEASFAPEldisrvvktsegIPEFFeQPIYVFKVPNLIGFTTIPLKIYRYFTKRWLA 346 Spathaspora pas...
CCE45404     282 --------LKPVPMR-FIKSSEYANAPLAPEfnldtilkddkgIPYFFeQPVYVFSVPTIQGFKNVPRKVYRFFTKRFFA 352 Candida parapsi...
XP_002615422 301 -EGAEQKKQEPVPKP-YIQPADYASGTLAPEldftevirndknVPVLFeQPLSVFAIPKLSGFMNIPRKIYRYFNTRKMA 378 Clavispora lusi...
XP_001523795 304 -DDDEEKNLKPVAMK-YISGKEYPDSPLAPEfdmsrivrneqgVPEFFeQPVYVFPVPKVQGFVNIPTKIYRWFTKRFLA 381 Lodderomyces el...
XP_002550915 260 -------NLKPVPLQ-YIKPKDYAISQLAPEldmttvikdkngVPVFFeQPVYVYPLPNVVGFTNIPRKLYNWFTQRFLV 331 Candida tropica...
XP_004197444 339 kKEEEDDEENKVPKP-YILPSEYAKAEFAPEfnretticndrgIPVIFeQPVYTFALPKVSGFVNFPKKIYNFFTRRYVA 417 Pichia farinosa...
XP_001383954 272 -DEAGTKKLPPVTKS-FIQPSEYAAAQLAPElnmaniilndknVPVVFeQPVYVYPIPKLTGFSKIPQKIYKYFTTRRLA 349 Scheffersomyces...
Q0CR10       319 ERVGREVAGIVLAAqARPYTDGsstagseltfgdggldatpaavsadglssgnfeqQSVLEEEEREwhksvleeeereWH 398 Aspergillus ter...
Q6BTN1       412 DDYGCRTSVVVQNV-SRPFVYKd---------------------------------QFMAKEEELE------------WP 445 Debaryomyces ha...
EDK39798     375 DDFCRRTAQLVDNK-SRPFEYKd---------------------------------QFMAKEEESE------------WP 408 Meyerozyma guil...
XP_007377626 347 DDYGAKATGVVMNK-TRPFTKDd---------------------------------LDFAADEEKE------------WP 380 Spathaspora pas...
CCE45404     353 DDYGERTTHIVNKD-TRPFKEKd---------------------------------ILMAKEEEVD------------WP 386 Candida parapsi...
XP_002615422 379 EEVSEKTLPIIYGR-SRPFEFKd---------------------------------RFLGKEEELD------------WP 412 Clavispora lusi...
XP_001523795 382 DDFGDRAAHIVNME-TRPFVYKd---------------------------------ILMAGEEEID------------WP 415 Lodderomyces el...
XP_002550915 332 EDFGQRTATIVDNK-TRPFVYKd---------------------------------VLMAKEEEFN------------WP 365 Candida tropica...
XP_004197444 418 QEAAEHTLAVIYNQ-IRPFEYKd---------------------------------KYMAGEEEQF------------WP 451 Pichia farinosa...
XP_001383954 350 DDFGRRTTSIVYNL-SRPYEFKd---------------------------------TLSAKEEEAE------------WP 383 Scheffersomyces...
Q0CR10       399 KSVHKKDEANPDKereWVDEVVMDPRIASRMQRY 432 Aspergillus terreus NIH2624
Q6BTN1       446 KKWVATGKEKNSE---WVQELVTDDRVTTRMKVF 476 Debaryomyces hansenii CBS767
EDK39798     409 KKWVQKGKDKGSE---WVQELVVDDRIAQRFRVF 439 Meyerozyma guilliermondii ATCC 6260
XP_007377626 381 KKWVKTGKERNSE---WVQDLQADDRIISRLKVF 411 Spathaspora passalidarum NRRL Y-27907
CCE45404     387 PNWVKRGTERGSE---WVQELAYDDRVISRMRVF 417 Candida parapsilosis
XP_002615422 413 KKWVERGRAKNSE---WVQELEVDERIANRMRVY 443 Clavispora lusitaniae ATCC 42720
XP_001523795 416 KNWVKKGLEKKSE---WVQELEYDERVTSRLRVF 446 Lodderomyces elongisporus NRRL YB-4239
XP_002550915 366 KKWVATGKERGSE---WVQELECDERVTSRMKVF 396 Candida tropicalis MYA-3404
XP_004197444 452 KRWVQTGKEKNSE---WVQELVVDEKVTSRMRVY 482 Pichia farinosa CBS 7064
XP_001383954 384 KKWVAKGIEKNSE---WVQELEVDERITDRMRVY 414 Scheffersomyces stipitis CBS 6054
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