Conserved Protein Domain Family
TNFRSF1A_teleost

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cd15834: TNFRSF1A_teleost 
Tumor necrosis factor receptor superfamily member 1A (TNFRSF1A) in teleosts; also known as TNFR1
This subfamily of TNFRSF1 ((also known as type I TNFR, TNFR1, DR1, TNFRSF1A, CD120a, p55) is found in teleosts. It binds TNF-alpha, through the death domain (DD), and activates NF-kappaB, mediates apoptosis and activates signaling pathways controlling inflammatory, immune, and stress responses. It mediates signal transduction by interacting with antiapoptotic protein BCL2-associated athanogene 4 (BAG4/SODD) and adaptor proteins TRAF2 and TRADD that play regulatory roles. The human genetic disorder called tumor necrosis factor associated periodic syndrome (TRAPS), or periodic fever syndrome, is associated with germline mutations of the extracellular domains of this receptor, possibly due to impaired receptor clearance. Serum levels of TNFRSF1A are elevated in schizophrenia and bipolar disorder, and high levels are also associated with cognitive impairment and dementia. Knockout studies in zebrafish embryos have shown that a signaling balance between TNFRSF1A and TNFRSF1B is required for endothelial cell integrity. TNFRSF1A signals apoptosis through caspase-8, whereas TNFRSF1B signals survival via NF-kappaB in endothelial cells. Thus, this apoptotic pathway seems to be evolutionarily conserved, as TNFalpha promotes apoptosis of human endothelial cells and triggers caspase-2 and P53 activation in these cells via TNFRSF1A.
Statistics
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PSSM-Id: 276930
Aligned: 9 rows
Threshold Bit Score: 218.898
Created: 27-Aug-2014
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Feature 1:CRD1 [structural motif]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1         #    ######################## #######                                           
XP_003450686   43 Ckl-dEFLTTEGICCNKCSPGFKLQEKCHgPKERSTCTPCPEG-EYLEFMNYypNCRRCIPCKarNNEIEVSPCSRNQNT 120  Nile tilapia
NP_998355      34 Cle-nEYWNKEGFCCDKCHQGYKLKQECSaENMRSKCEKCDEG-TYLEQANYspNCFRCQQCTk-PHSRESSPCTPYSNR 110  zebrafish
CAF97843       39 Ctd-aEYRSENGICCNKCVPGYRLVQECTaSGQRSTCMPCPSR-QFQETINYstTCRTCSICK--KNDDVVLPCNKTKDT 114  spotted green...
XP_003966353   31 Cld-vEYQSESGICCNKCPPGYRLKEECSaPRERSNCTACPYG-QYMDTMNYadKCRTCRKCN--NHKVVFRPCKGNQNT 106  torafugu
ACI33820       40 CpdgsHYHNANGTCCRKCHEGFKLKEHCTkDGENSQCVPCEEGrTYREKSNYvkTCLRCTLCV--DNEEEESPCKKSSNT 117  Atlantic salmon
NP_001135245   40 CpdgsHYHNANGTCCRKCHEGFKLKEHCTkDGENSQCVPCEEGrTYREKSNYvkTCLRCTLCV--DNEEEESPCKKSSNT 117  Atlantic salmon
XP_007550188   31 Ckp-wEYEVEDGNCCNKCHPGFKLVEKCT-SNTISVCEPCGDG-EFSDQINFslTCRRCKTCKvsKLEYQVSACRNDSNT 107  Amazon molly
XP_004078251   38 Cpt-gDYLSKNNICCNKCNPGYKLVKECLvAGHRSNCTSCPED-QYMDQINYnpNCFRCKVCKrrKHEVEESSCKRDKNT 115  Japanese medaka
CDQ91216       43 ClegsHYRTANGTCCRKCHEGFKLKEDCT-KEGESQCEPCKEGrTYLERSNYakNCLRCTRCDv-DNEEEVSPCKKSRNT 120  rainbow trout
Feature 1                                                                                       
XP_003450686  121 KCRCKDGYYKYTVDSEtsVCLKCKNCKDDEVELQICTpenNTVCGCKDNYyk---dNKKCKLCESCSa--qCQHLCLT 193  Nile tilapia
NP_998355     111 VCECDTDYYKKKLGDLgwECSRCKKCGDGQIEIQNCTkeeNRQCKCQENHyp--fnKNSCKLCDKCQp--gCDHLCKT 184  zebrafish
CAF97843      115 VCRCRDGFYKSVIDSTkyQCLRCKSCELNEEEIQKCTpekNTVCACKQDYyr---nNKKCEICTNCTd--eCESYCTA 187  spotted green p...
XP_003966353  107 VCQCDKGYYRSNIDSEnfECLKCRQCDHPEKESQKCTpenNTVCQCEDNYyr---lNNKCELCSKCVd--lLTRDPWL 179  torafugu
ACI33820      118 LCRCKKGFYKNRINSEtrECLSCKTCGPGERETQPCTqesDTVCECKDFYfrdkknNKTCLPCQICEltadCQQECSS 195  Atlantic salmon
NP_001135245  118 LCRCKKGFYKNRINSEtrECLSCKTCGPGERETQPCTqesDTVCECKDFYfrdkknNKTCLPCQICEltadCQQECSS 195  Atlantic salmon
XP_007550188  108 KCQCNKGYYKNNIDSEtyDCLKCKTCGLNEIEIQPCTpetNTVCDCQENFfr---eKGKCEPCSRCSl--kCAQHCTT 180  Amazon molly
XP_004078251  116 VCVCEAGYYKSEIDPTafECLKCSKCRPDEKVKQQCTrdtNTVCVCKDGHyr---eKNTCKPCEGCSv--eCSHLCEA 188  Japanese medaka
CDQ91216      121 VCRCIEGFYKKRIDSVtrECLRCKTCGPGERETQPCTpesDTVCECKGFRnk--knNRNCLPCQNCRsa-dCQQECAS 195  rainbow trout

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