2C30,2F57,2Q0N,2CDZ


Conserved Protein Domain Family
STKc_PAK_II

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cd06648: STKc_PAK_II 
Click on image for an interactive view with Cn3D
Catalytic domain of the Serine/Threonine Kinase, Group II p21-activated kinase
STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.
Statistics
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PSSM-Id: 270815
Aligned: 10 rows
Threshold Bit Score: 494.269
Created: 3-Sep-2008
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 22 residues -Click on image for an interactive view with Cn3D
Feature 1:ATP binding site [chemical binding site]
Evidence:
  • Structure:2CDZ; Human PAK4 binds the purine-based inhibitor Cgp74514a; defined at 4A contacts.
    View structure with Cn3D
  • Structure:2F57; Human PAK5 binds the purine-based inhibitor Lopac-C-3353; defined at 4A contacts.
    View structure with Cn3D
  • Comment:Also based on the binding of other related proteins with structure to ATP or inhibitors.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                      #####   #            # #                            #             
2C30_A        39 DQGDPRLLLDSYVKIGEGSTGIVCLAREkhsGRQVAVKMMDLRKqqRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELW 118 human
2F57_B        39 SPGDPREYLANFIKIGEGSTGIVCIATEkhtGKQVAVKKMDLRKqqRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELW 118 human
2Q0N_A        23 DPGDPRSYLDNFIKIGEGSTGIVCIATVrssGKLVAVKKMDLRKqqRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELW 102 human
2CDZ_A        25 DPGDPRSYLDNFIKIGEGSTGIVCIATVrssGKLVAVKKMDLRKqqRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELW 104 human
Q9VXE5       360 SAGDPRENLDHFNKIGEGSTGTVCIATDkstGRQVAVKKMDLRKqqRRELLFNEVVIMRDYHHPNIVETYSSFLVNDELW 439 fruit fly
ABF71876     223 DGTDPRSDLTDYKQIGEGSTGVVEAAYKistKQIVAVKRMNLRKqqRRELLFNEVSILRQYQHPNIVRFFSSHLVDDELW 302 nematode
XP_001637909  21 QSTRQPENLGNFMKIGEGSTGIVCLATDkrtGRQVAVKKMDLKKqqRRELLFNEVVIMRDYPHPNIVEMYGSHLVGDELW 100 starlet sea ane...
EDP36599     272 LPGDPRADLTNYTQIGEGSTGTVVTAHQistGRKIAIKKMNILKqqRRELLFNEVLIMRDYEHPNVVEMYGSYLVGDELW 351 agent of lympha...
XP_002108660 161 SKDDPRSRFDRFVKIAEGSTSIVTIAHDykyDRKVAVKKMDLTKqqRRELLFNELAIMKDFHYANIVELYDSYLVGDELW 240 Trichoplax adha...
XP_792633    491 SPGDPRYKLENFVKIGEGSTGIVCIATEassGRQVAVKKMDLRKqqRRELLFNEVVIMRDYKHPNIVEMYDSFLVGDELW 570 purple sea urchin
Feature 1          ##### ##  #                                       ## #         ##             
2C30_A       119 VLMEFLQGGALTDIVSq-vRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTlDGRVKLSDFGFCAQISKDVPK 197 human
2F57_B       119 VVMEFLEGGALTDIVTh-tRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTsDGRIKLSDFGFCAQVSKEVPK 197 human
2Q0N_A       103 VVMEFLEGGALTDIVTh-tRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLThDGRVKLSDFGFCAQVSKEVPR 181 human
2CDZ_A       105 VVMEFLEGGALTDIVTh-tRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLThDGRVKLSDFGFCAQVSKEVPR 183 human
Q9VXE5       440 VVMEYLEGGALTDIVTh-sRMDEEQIATVCKQCLKALAYLHSQGVIHRDIKSDSILLAaDGRVKLSDFGFCAQVSQELPK 518 fruit fly
ABF71876     303 VVMEFMEGGSLTDIVTa-tRMTEPQIATISRQVLGALDFLHARKVIHRDIKSDSILLKrDGTVKLTDFGFCGQLSEEVPR 381 nematode
XP_001637909 101 VVMEFLEGGTLTDIVTh-tNLSEEQVACVCRAVLKALTFLHSQGVIHRDIKSDSILLTsNGTVKLSDFGFCAQVTEDMPR 179 starlet sea ane...
EDP36599     352 VLMEYMEGGALTDIITq-mRIDEPAIATICVQCLKALEYLHSKGVVHRDIKSDSILLTkDGVAKISDFGFCGQLSVDIPQ 430 agent of lympha...
XP_002108660 241 LVLEYVAGGSLTDIITq-tRIHEDQIATVCKYCLRALSFLHTHKIIHRDIKSDSVLLTsSGQVKLSDFGFCSQTSDEVPR 319 Trichoplax adha...
XP_792633    571 VVMEFLEGGALTDIVThtgRMQEEQVAYVCQAILKALAFLHSQGVIHRDIKSDSILLThDGNVKLSDFGFCAQISSDTPK 650 purple sea urchin
Feature 1                                                                                        
2C30_A       198 RKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDS-PPPKLKNShkVSPVLRDFLE 276 human
2F57_B       198 RKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDS-LPPRVKDLhkVSSVLRGFLD 276 human
2Q0N_A       182 RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN-LPPRLKNLhkVSPSLKGFLD 260 human
2CDZ_A       184 RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN-LPPRLKNLhkVSPSLKGFLD 262 human
Q9VXE5       519 RKSLVGTPYWMSPEVISRLPYGPEVDIWSLGIMVIEMVDGEPPFFNEPPLQAMRRIRDM-QPPNLKNAhkVSPRLQSFLD 597 fruit fly
ABF71876     382 RRSLVGTPYWTAAEVIAREPYDTRADIWSFGIMLIEMVEGEPPFFNDQPFQAMKRIRDEhEARFSRHAk-VSVELSELLS 460 nematode
XP_001637909 180 RKSLVGTPYWMAPEVISRKPYGTEVDIWSLGIMVLEMVDGEPPYFNEPPLQAMRKLRDL-EPPTSRNPiqISPRLQSFLD 258 starlet sea ane...
EDP36599     431 RRSLVGTPYWMSPEVISRLPYGTEADIWSLGIMVIEMVQGEPPLFNVQPLQAMKMIRDN-GPPKINEPvnVSPELASFIS 509 agent of lympha...
XP_002108660 320 RRSLVGTPYWMAPELIAREPYGSEVDIWSLGIMIIEMVDGEPPHFDKSPLEAMTNIRTD-KPPHFRHH--VSAILRSFAR 396 Trichoplax adha...
XP_792633    651 RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVMEMVDGEPPFFNEPPLQAMRRIRDM-PPPKLKNThkASPRLLGFIE 729 purple sea urchin
Feature 1                               
2C30_A       277 RMLVRDPQERATAQELLDHPFLL 299 human
2F57_B       277 LMLVREPSQRATAQELLGHPFLK 299 human
2Q0N_A       261 RLLVRDPAQRATAAELLKHPFLA 283 human
2CDZ_A       263 RLLVRDPAQRATAAELLKHPFLA 285 human
Q9VXE5       598 RMLVRDPAQRATAAELLAHPFLR 620 fruit fly
ABF71876     461 HCIVKDVNKRWPAKDLLRHPFFA 483 nematode
XP_001637909 259 NALIRDPLYRATAFELLNHPFIR 281 starlet sea anemone
EDP36599     510 QMLVRDVKQRATASQLLNHEFLK 532 agent of lymphatic filariasis
XP_002108660 397 LMLVKQPESRATAYELLQHQFIL 419 Trichoplax adhaerens
XP_792633    730 RLLVRDPSQRASAFELLEHPFLR 752 purple sea urchin

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