Conserved Protein Domain Family
BBS2_Mid

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pfam14783: BBS2_Mid (this model, PSSM-Id:258920 is obsolete and has been replaced by 405473)
Ciliary BBSome complex subunit 2, middle region
The BBSome (so-named after the association with Bardet-Biedl syndrome) is a complex of 8 subunits that lies at the base of the flagellar microtubule structure. The precise function of the all the individual components in cilia formation is unclear, however they function to promote loading of cargo to the ciliary axoneme. The primary cilium, a slim microtubule-based organelle that projects from the surface of vertebrate cells has crucial roles in vertebrate development and human genetic diseases. Cilia are required for the response to developmental signals, and evidence is accumulating that the primary cilium is specialized for Hedgehog (Hh) signal transduction. Formation of cilia, in turn, is regulated by other signalling pathways, possibly including the planar cell polarity pathway. The connections between cilia and developmental signalling have begun to clarify the basis of human diseases associated with ciliary dysfunction. BBS2 is one of the three Bardet-Biedl syndrome subunits that is required for leptin receptor signalling in the hypothalamus, and BBS2 and 4 are also required for the localisation of somatostatin receptor 3 and melanin-concentrating hormone receptor 1 into neuronal cilia.
Statistics
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PSSM-Id: 258920
Aligned: 24 rows
Threshold Bit Score: 117.334
Created: 30-Mar-2013
Updated: 4-Apr-2013
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q23PP7       154 VVTSIGFSDv---------------DGDg--kLELIVGSADNQIRVFKGE-EILFEFQEAAKPIIISRMN-KtrFAFGLE 214 Tetrahymena the...
XP_002422674 152 DVRSLALIDv---------------DNDg--eNELVVGSDDYDIRIFKNE-DLVHEITETQIVTFLVNVG-NdlFAYTLA 212 human body louse
EFX81473     120 QVSALALIDf---------------DGDg--hNHLLAGTDDGNLRLFRNG-RMTTEMKETDAVTFLIALT-DhcFGYALA 180 common water flea
CCA20224     154 NVGALALCDi---------------SGQg--qLELVVGTDDFEISAYQND-QIVHECTETSRIVALTSIE-HhlFGYALQ 214 Albugo laibachi...
XP_002906657 165 HVRALTV-Nv---------------TGHg--rDELIAGSDDFEIRAFQNE-EVVFECTETSRVLALTAIK-KqmFGYALQ 224 Phytophthora in...
ADI46967     155 NVSAMAFCDv---------------DQDg--rHELLVGSDDFDVRIFCGE-DVIAEVPEADQFVALAAVL-GpqFGYALV 215 Volvox carteri ...
BAJ93985     157 NVSAMCFCDi---------------DGDs--fDELLVGSEDFAIRAFKQE-EIFVEITESGKVIDLVNLK-TgsFAYALD 217 domesticated ba...
EGD73023     164 DVTAMAVGPf---------------TTg---dAELVVGSEDFDIRSFNADaELLVEISERDAITQLIRLS-GqrFAFSLA 224 Salpingoeca sp....
EKG05804     324 QVSALALMPwgasnnrgessiisptINPsdapLSLVAASEDFELRVFDGE-ETIASIVEVEKVNQLVYSGiPgrFAYLSA 402 Trypanosoma cruzi
CBY35333     160 aVNAICFVDl---------------IGKn--yDQIVVGTTDQEITIYDHE-ELIDTRTEVSQIALLTRVG-AdqMAYALQ 220 Oikopleura dioica
Q23PP7       215 NGMVGIYAK---KTRKWRAKSSLKPIAVQLSDFGnlkegyrPLVVGRSNGQIEIR 266 Tetrahymena thermophila SB210
XP_002422674 213 NGTVGVYEK---LNRLWRVKSKNRPTCLLKYDIDgdg--cdELITGWQGGKVDGR 262 human body louse
EFX81473     181 NGTVGVYHK---RNRLWRVKSKNQIVALASYDVDndg--hpELICGWSHGRFDAR 230 common water flea
CCA20224     215 NGTVGVYRG---KNRAWRVKSNKVPTSLHSFDVNgdg--epELIIGWGNGKIEAR 264 Albugo laibachii Nc14
XP_002906657 225 NGTVGVYKG---KHRAWRVKSKNVPTAIHSFDIDgdg--ekEIVMGWSNGKFEAR 274 Phytophthora infestans T30-4
ADI46967     216 NGTIGLYNRwawLDRVWRVKSKHSVCAIASYDLDgdg--vpELISGWGNGRMEVR 268 Volvox carteri f. nagariensis
BAJ93985     218 NGTVGIYRG---DKRQWRSKTKMKFNSMVGYNSEgga--nsCLIVAWSNGRIEVR 267 domesticated barley
EGD73023     225 NGTVGVFQS---STLLWSHKTKHQATALAAYDINfdg--vpELAVGWADGRVDVf 274 Salpingoeca sp. ATCC50818
EKG05804     403 NGTVGVYDR---TERVWRAKGKHRPVSAAFCDVDfdg--vpELIVGWSNGRLEVR 452 Trypanosoma cruzi
CBY35333     221 NGTIGVYQR---LNRLWRVKSKSTATCQCFYKPNk------SLLTGWESGRWEMR 266 Oikopleura dioica
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