3OAA


Conserved Protein Domain Family
HAS-barrel
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pfam09378: HAS-barrel (this model, PSSM-Id:255328 is obsolete and has been replaced by 401360)
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HAS barrel domain
The HAS barrel is named after HerA-ATP Synthase. In ATP synthases, this domain is implicated in the assembly of the catalytic toroid and docking of accessory subunits, such as the subunit of the ATP synthase complex. Similar roles in docking of the functional partner, the NurA nuclease, and assembly of the HerA toroid complex appear likely for the HAS-barrel of the HerA family.
Links
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Statistics
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PSSM-Id: 255328
Aligned: 60 rows
Threshold Bit Score: 28.6739
Created: 29-Mar-2013
Updated: 4-Apr-2013
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
3OAA_I        24 EAHNEGTIVSvSDGVIRIHGLA------------DCMQGEMISL--P---------GNRYAIALNLER------------ 68  Escherichia col...
Q831Z4        10 VALVVEVNGI-RCKAITFDDMNqatyinngevikNLSVNSFVVI--Rqn------fIKIIGRINSESIwdtqnnkqny-- 78  Enterococcus fa...
P72733        18 IAEVIETSTT-GFLAQCLEPEElnf-------ptMPAFGSWVKA--Tded----sgNTIFAVVSYATTmpidsihraral 83  Synechocystis s...
Q8DL60        11 FAEIIQTATD-HCIAQCHEPPGldf-------pvVPALGSWVRI--Peg------dRVIYGVVAYVVTapidtihratal 74  Synechococcus e...
Q7P847         6 IGRVISVDSF-KIMIELDENIKgthksgyydiyeVAKVNSYVIV--Pig------sDKIVALITRVKTfedsei------ 70  Fusobacterium n...
Q7LYV9         3 IGYIIGSATI-NEATAILEQ--------------KIRAGYYVIL--Eyd------gDKILGLITNVYTgspllddnlndv 59  Sulfolobus acid...
Q58824         3 VMKVVGKTTTtHFTFESLE---------------KIRFGEYVIA--Knv-----dgRDVLGVIKNVVA------------ 48  Methanocaldococ...
Q60270         9 VGTVVASKNV-NEFEFVIENQVi----------dKIKKGEFVIT--Knt-----hgDYLLSKITKIVSvnaligdkseda 70  Methanocaldococ...
YP_001634073  10 IGEVIESSTI-HFVAATYELLA------------SPPFGSLVRAttTdq------gLHVYGLIYDIHTgsrepggraivr 70  Chloroflexus au...
YP_001037563   5 IGKLIGNTGNpNDLKIALENSF------------SAKRGEFVKI--KhreseedgdTYVLGRIVSISRsnilynsnmgeg 70  Clostridium the...

3OAA_I        69 -------------------DSVGAVVMGPYaDLAEGMKVKC 90  Escherichia coli DH1
Q831Z4        79 ----------qldnrfsknTIKRILDIQ------IIGYISE 103 Enterococcus faecalis
P72733        84 -------glslgelreqqpQIFAMLTTEFQ--AAIVGFQSR 115 Synechocystis sp. PCC 6803
Q8DL60        75 -------glsleqlreeqpHIFAMLKTEVT--IAIAGFQER 106 Synechococcus elongatus
Q7P847        71 --------------ekstgGIRFSKSKRHL-IATMLGTITE 96  Fusobacterium nucleatum subsp. vincentii ATCC 49256
Q7LYV9        60 k-----fvqrikqleankiP-FFIKARI-----KLLCKLDG 89  Sulfolobus acidocaldarius
Q58824        49 -------------------DVEKFVGEV-----KVIGVLDG 65  Methanocaldococcus jannaschii DSM 2661
Q60270        71 sel--akirgviyseemlnNSSKFLASA-----KILGVINN 104 Methanocaldococcus jannaschii DSM 2661
YP_001634073  71 grtytgrylyddeiyrahpDLSVVLQTEFT--ALIVGYtlh 109 Chloroflexus aurantiacus J-10-fl
YP_001037563  71 -------lssleilpgaqvTGETLFGTI-----ELVGYRDN 99  Clostridium thermocellum ATCC 27405
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