3NIS,3NY1,3NY2


Conserved Protein Domain Family
zf-UBR

?
pfam02207: zf-UBR (this model, PSSM-Id:251157 is obsolete and has been replaced by 460491)
Click on image for an interactive view with Cn3D
Putative zinc finger in N-recognin (UBR box)
This region is found in E3 ubiquitin ligases that recognize N-recognins.
Statistics
?
PSSM-Id: 251157
Aligned: 101 rows
Threshold Bit Score: 40.0459
Created: 28-Mar-2013
Updated: 4-Apr-2013
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
3NIS_F         9 RNCGRKFK--IG-----EPLYRCHECGC------DDTCVLCIHCfNPKDHVNHHVCTDICTeftSGICDCGDEEAWN-SP 74  baker's yeast
Q5Z6C2        49 KECTY-----GGgylkrQAVFSCLTCVP------AGVAGVCTAC-SLACHDGHEVVELWTKr--KFRCDCGNSKF-GsHV 113 Oryza sativa Ja...
Q9T0A1        40 DECTF-----PKgymkrQAIFSCITCTP------EGNAGICTAC-CLSCHDGHELLELWTKr--NFRCDCGNSKF-GtLA 104 thale cress
Q4RM14        32 ENCSY-----SRgyvkrQAVFACNTCTPs----aAEPAGICLAC-ANECHDGHDIFELYTKr--NFRCDCGNKKF-GdFK 98  spotted green p...
Q4TC52        33 DHCSY-----PQgyvkrQALYACNTCTPk----gGEPTGVCLAC-SYKCHEGHDLFELYTKr--SFRCDCGNEKF-AeLK 99  spotted green p...
Q6INJ1        52 EKCSY-----PEgyvrrQALYACNTCTPn----kEDPAGICLAC-SYKCHEGHDLFELYTKr--NFQCDCGNAKF-KqLE 118 African clawed ...
Q52KC0        44 EKCSY-----SQgsvgrQALYACSTCTPe----gEEPAGICLAC-SYECHGSHKLFELYTKr--NFRCDCGNSKF-KnLE 110 house mouse
Q171B0        45 KNCTY-----SRgyigrQALYACMTCMPesrvneEKRTGVCLAC-SYQCHEGHDLIELYTKr--NFRCDCGGKRM-PdVR 115 yellow fever mo...
Q7QG54        40 KNCTY-----TKgyvgrQALYACLTCVPeargieSKRSGICLAC-SLQCHDNHELLELYTKr--HFRCDCGGPRM-PeVK 110 Anopheles gambi...
XP_001630221  37 QQCTYEKGyvGR-----QALYACSTCSCp----sSEPAGLCLAC-SLTCHDGHELYELYTKr--NFRCDCGNSKFEG-F- 102 starlet sea ane...
3NIS_F        75 lHCKAEE 81  baker's yeast
Q5Z6C2       114 --CKLCP 118 Oryza sativa Japonica Group
Q9T0A1       105 --CKLLP 109 thale cress
Q4RM14        99 --CQLSP 103 spotted green pufferfish
Q4TC52       100 --CKLFP 104 spotted green pufferfish
Q6INJ1       119 --CKLFP 123 African clawed frog
Q52KC0       111 --CKLFP 115 house mouse
Q171B0       116 --CKLDP 120 yellow fever mosquito
Q7QG54       111 --CKLEP 115 Anopheles gambiae str. PEST
XP_001630221 103 -NCKLFP 108 starlet sea anemone
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap