1OMW,1BAK


Conserved Protein Domain Family
PH_GRK2_subgroup

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cd01240: PH_GRK2_subgroup (this model, PSSM-Id:241273 is obsolete and has been replaced by 269946)
Click on image for an interactive view with Cn3D
G Protein-Coupled Receptor Kinase 2 subgroup pleckstrin homology (PH) domain
GRKs are a family of serine-threonine kinases which phosphorylates activated G-protein coupled receptors leading to the release of the previously bound heterotrimeric G protein agonist and thus signal termination. There are seven mammalian GRKs (GRK1-7) grouped into three subfamilies: GRK1 (GRK1 and 7), GRK2 (GRK2 and 3), and GRK4 (GRK4-6). GRKs have three functional components: an N-terminal Regulators of G-protein signaling (RGS) which interacts with the seven-trans-membrane helical receptor protein and/or other membrane targets, a central catalytic protein kinase C (PKc) domain, and a C-terminal section containing a autophosphorylation region and a variable region that mediates membrane association. In both GRK2 (also known as beta-adrenergic receptor kinase-1) and GRK3 (beta-adrenergic receptor kinase-2), the C-terminal variable region contains a PH domain which gives binding specificity to Gbetagamma proteins. The GRK2 PH domain has an extended C-terminal helix, which mediates interactions with G beta gamma subunits. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Statistics
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PSSM-Id: 241273
Aligned: 17 rows
Threshold Bit Score: 168.641
Created: 4-Feb-2003
Updated: 1-Feb-2013
Structure
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Program:
Drawing:
Aligned Rows:
 
G-beta gamma
Conserved site includes 20 residues -Click on image for an interactive view with Cn3D
Feature 1:G-beta gamma binding site [polypeptide binding site]
Evidence:
  • Structure:1OMW; Bos taurus GRK PH domain binds Gbetagamma, contacts at 4A
  • Comment:This interaction enhances the phosphorylation of activated GPCRs and facilitates its recruitment to the plasma membrane

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1        #  ###                           ###               # # #                        
1OMW_A       553 YALGKDCIMHGYMSKMGNPF-LTQWQRRYFYLFPNRLEWRGEGea---pqSLLTMEEIQSVEETQi------KERKCLLL 622 Bos taurus
AAF08967     550 EPCEKDVIVEGEILKLGGPF-LNSWQKRHLRLYPNRLEFYQKNrdggiqkNKVELITMYDLKEVChefqklnKADNCIVM 628 longfin inshore...
Q09639       553 EEKDSDVIVHGYIKKLGGPF-TSAWQTKYGKLYPSRLELYPESl-----tAKPELVFMDQIEDVCaem-qtiKGETAIIV 625 Caenorhabditis ...
XP_002119279 274 DNLEGDCFLHGILYKLGGPLaLTTWQKKYFYLYPNRLEWKDYDgs----kNLVVFESVTMIKEGQa-----kGMKFCLFI 344 Ciona intestinalis
XP_002154756 281 SVQNGDCLLHGYLYKLGGPF-LSVWTKKYFFLYPNRLEYRGEQwhs--qkLLLPLENIQFVDEIVy------KTFKCIKI 351 green hydra
P32865       552 DEKESDCILHGYIKKLGGSF-ASLWQTKYAKLYPNRLELHSESg-----nNKPELIFMDQVEDISsdf-ilhKNENCIQI 624 fruit fly
XP_002405936 526 AVSESDCIIHGYVKKLGGPF-ASAFQTRYGKLYPNRLELHTESg-----sAKPELIFMDQMEDVCpdy-vqvKGEQCIVV 598 black-legged tick
CBY24764     454 HAYGKDVIIWGPCQRLGGPF-QSQWQRKHLFLFPNRLELGIDGd-----lHVWPLEELIAITDHTh------RGNRTIQL 521 Oikopleura dioica
XP_002739097 467 YALGKDCIMHGQMLKLGGPF-LTAWQKRYFYLFPNRLEWQGEGek----gNILTMEQVMSVDETTi------KSFKCIQL 535 Saccoglossus ko...
CCD75803     516 VSNTSDCIVEGDVLKLGGPF-LQTWQRKHLRLFPNRIELYNKSrdglilkKGVDLISMLDIKEISpefsrvcKMDNCISI 594 Schistosoma man...
Feature 1                                           #  ##  ##### ##  
1OMW_A       623 KIR----GGKQFVLQCDsDPELVQWKKELRDAYREAQQLVQRVPKMKNKPRA 670 Bos taurus
AAF08967     629 ILKn---ETKLVITSQD-KVLINQWKEEILGGFRASTKMQSKMNKKASKLYG 676 longfin inshore squid
Q09639       626 KLRdgfkEPKICLTNSD-EISLKEWHTSLRTAHKVSQELLQRMGRKAIKIYG 676 Caenorhabditis elegans
XP_002119279 345 STRe---SSKDIILRCEsQPEFTQWSKDLIKTWCQAKRVMKSGPKLISMQRS 393 Ciona intestinalis
XP_002154756 352 HLKd---NREQLVLRADsDTEYNEWFKEICKSYEEAQVQIRTGAKILTSSCG 400 green hydra
P32865       625 RINdgtrDGRIILTNSD-EIGLKEWSSSLRSAHKISQDLLGSMAKKAGKIYG 675 fruit fly
XP_002405936 599 KMKg---DTKVVITNSD-EIGLKEWLLSLRSTLKDSQELLSSMAKKAGKIYG 646 black-legged tick
CBY24764     522 RLK----SQKEFLIKFDsECERHQWLTDLTRTWQEAQRLLKRGPKQISTQRS 569 Oikopleura dioica
XP_002739097 536 KVK----GGKQFVLRTEsDPEFVQWFKEIKEAFLEAQRMLRRGPKMLATQGS 583 Saccoglossus kowalevskii
CCD75803     595 KLKn---DTRLYITSND-KIMITQWKEEILEGYRISCELMAHMNKKAHKMYG 642 Schistosoma mansoni

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