Conserved Protein Domain Family
CBS_pair_24

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cd04637: CBS_pair_24 (this model, PSSM-Id:240008 is obsolete)
The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members), Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase), retinitis pigmentosa (IMP dehydrogenase-1), and homocystinuria (cystathionine beta-synthase).
Statistics
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PSSM-Id: 240008
Aligned: 10 rows
Threshold Bit Score: 160.593
Created: 28-Nov-2006
Updated: 17-Jan-2013
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
YP_662091     9 VEVVSINMdDTLAHVRVLFEhhrfhHLLVVDk-gQLVGIISdRDLLKAISp-aVGTASETSKDLAYLKkpaHQIMTRDPV 86  Pseudoalteromona...
YP_356761     9 KRVVTVQMdDTLRSINAIFCsakfnHLLVLEd-gELVGIISdRDLLKATSp-fLGTAAERPQDASRWErkaHQIMTRDLI 86  Pelobacter carbi...
ZP_01113509   9 RKVQTLTPeNSFETVREIFRkvsfhHLVVVNdhnELKGILSdRDMMAQIAlwlDRNNGESFTDFLPRLt-vGDVMTRDVI 87  Reinekea sp. MED297
ZP_01076196   3 KSPVCVEMdTRLEEVRRLLEehgfhHLPVLDg-dELVGIISdRDILRLVSp-fLDTAGEMERDLEVLNkaaHQVMTRQPI 80  Marinomonas sp. ...
YP_444692    81 RDVVTVAPdAALIDIRKRLQeggfnHMLVVEd-gALCGVISdRDVLKAISp-fLDTYSEKHRDVKTLSrpaSEIMQGDPI 158 Salinibacter rub...
YP_527172     9 TRLITAAPtDTVGRLSKIFAtlpihHVLVVEa-dKLIGVVSdRDVLRNISp-fVNTKAEEAKDTFTLSrqaKQIMSKKPV 86  Saccharophagus d...
NP_716860    11 TRVVTVEMdDRLTVAKDIFEqanfhHLLVLDe-yKLEGVLSeRDLLRAISp-nLGNGAETSKDLETLQkriHQVMTRNPV 88  Shewanella oneid...
ZP_00838349   3 TRVVTIEMdDRLTIVKEIFDsapfhHLLVIEn-dSLQGVLSeRDYLRTLSp-hIGSIGETERDSDTLQrraHQVMSRDPI 80  Shewanella sp. PV-4
AAZ27768      9 EEVTCIDLdDRLSVVRELFIkhkfhHLMVTDsknQLVAVISeRDYLKATNs-nIELPTANEKDLAMLNkrvHQIVSKKLV 87  Colwellia psychr...
ZP_01307420   9 DRVVTVDHeASLWEVKMVFDntrfhHLLVTEn-nILVGVLSdRDYLKAVSp-nLGSATQSKADTDSLNtrvKTIMSTKLH 86  Oceanobacter sp....
YP_662091    87 CLspKSGLLEAIKAFnrysISCLPIVNinnKPIGILSWRDIFKF 130 Pseudoalteromonas atlantica T6c
YP_356761    87 TThpHASIKDAVELLlrnsISCLPVLTeegHVEGIVTWKDLIRT 130 Pelobacter carbinolicus DSM 2380
ZP_01113509  88 TVdaETPIDTASVLLlenrISSLPVIDvdqKVIGIVTWKDLLKY 131 Reinekea sp. MED297
ZP_01076196  81 CVslDDSLNTVIDWMtkvsISCIPVLDn-gQLVGIITWRDLVSL 123 Marinomonas sp. MED121
YP_444692   159 TVapGTPVEEASQTLldnrVSSLPVVEg-gDLIGIVTGKDMLEY 201 Salinibacter ruber DSM 13855
YP_527172    87 TIrvDRPVREAGKLMlekkVSLLPVVDeneQLIGVLSWKDVMRF 130 Saccharophagus degradans 2-40
NP_716860    89 TVapYVSLDVASRTLlehnIGCLPVLEn-gDLVGIVTWKDLLRA 131 Shewanella oneidensis MR-1
ZP_00838349  81 TIapEADIKTAGQLMlahdIGCLPVMAf-sKIVGIITWKDLLRA 123 Shewanella sp. PV-4
AAZ27768     88 AIkqFSPFSEAIKTFhdtgMSCLPVINsnnQPVGVITSRDIIKW 131 Colwellia psychrerythraea 34H
ZP_01307420  87 TLspDNTVLDAVKLFnqrsISCIPIVNedmTIAGIISWRDIMKT 130 Oceanobacter sp. RED65
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