1IOO,1DIX,1JY5,1IQQ,1BOL,1UCA


Conserved Protein Domain Family
RNase_T2_euk

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cd01061: RNase_T2_euk 
Click on image for an interactive view with Cn3D
Ribonuclease T2 (RNase T2) is a widespread family of secreted RNases found in every organism examined thus far. This family includes RNase Rh, RNase MC1, RNase LE, and self-incompatibility RNases (S-RNases). Plant T2 RNases are expressed during leaf senescence in order to scavenge phosphate from ribonucleotides. They are also expressed in response to wounding or pathogen invasion. S-RNases are thought to prevent self-fertilization by acting as selective cytotoxins of "self" pollen. Generally, RNases have two distinct binding sites: the primary site (B1 site) and the subsite (B2 site), for nucleotides located at the 5'- and 3'- terminal ends of the sessil bond, respectively. This CD includes the eukaryotic RNase T2 family members.
Statistics
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PSSM-Id: 238512
Aligned: 74 rows
Threshold Bit Score: 154.027
Created: 6-Mar-2002
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 7 residues -Click on image for an interactive view with Cn3D
Feature 1:Active site [active site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                          #  # #                                     
1IOO_A      2 FEYLQLVLTWPASFCyanhce-------riapnnFTIHGLWPDnvk-trLHNCkpk-------ptYSYft---------- 56  Persian tobacco
1UCA_A      1 FDSFWFVQQWPPAVCsfqksgsc----pgsglrtFTIHGLWPQqsg-tsLTNCpgs-------pfDITki---------- 58  balsam pear
CAG82527   67 PGGVLVLTQFWDWTPaigp------------ddlFTLHGLWPDncdgsyAQFCdksm----evqsVAAvlqq-------- 122 Yarrowia lipolytica
CAG78696   71 PGGLVLLAQFWDYDPgfgp------------edaFTLHGLWPDncdgtyQQYCdkeq----evsnVTDiikk-------- 126 Yarrowia lipolytica
CAG90919   59 PGGILLLTQFWDYYPpigg------------nesFTLHGLWPDncdgtyEQFCddsl----nirsATDivlnq------- 115 Debaryomyces hansenii
EAL03040   59 PAGVILLTQFWDYNPatgp------------dnlFTQHGLWGNmcsygyPQFCdpsleinpngeiIRSiivdq------- 119 Candida albicans S...
EAL03056   47 PGGIILFTQFWDYNPasgp------------adsFTIHSIWNDycsggyPQFCdtsleidstgstIESivvdq------- 107 Candida albicans S...
NP_015202  50 PGGIFLQTQFWNYFPskndlnetelvkelgpldsFTIHGLWPDnchggyQQFCnrsl----qiddVYYllhdkkfnnndt 125 baker's yeast
CAG60953   51 PGGILLMTQFWNYAPskpnlnrteleeelgpvdsFTIHGLWPDdcmggyPQFCkrdl----fiddVDYllksdafnn-dd 125 Candida glabrata
CAH00449   55 PGGIMLQTQFWDYIPpkgvsdpdelvrhlgpldsFTNHGLWPDncdgtyAQFCnres----niddVWHllnddqfng-rd 129 Kluyveromyces lactis
Feature 1                                        ##  ##                                       
1IOO_A     57 ------gKMLNDLDKHWMQLkfeqdygrteqpSWKYQYIKHGSCCqk----------------------ryNQNTYFGLA 108 Persian tobacco
1UCA_A     59 ------sHLQSQLNTLWPNVlran-----nqqFWSHEWTKHGTCSes----------------------tfNQAAYFKLA 105 balsam pear
CAG82527  123 ---lgetELLDKMNKIWIPNrgs------tdsFWTHEWNKHATCMstlkdkcy----------ssdapqyqSLADWAHTV 183 Yarrowia lipolytica
CAG78696  127 ----lepSLLDYMNEHWVSDdgd------nesFWEHEWNKHGTCMstlnpscy----------kegtdkhqNVADYARTA 186 Yarrowia lipolytica
CAG90919  116 ---fgdkVLYGKMSEFWKNFngn------desLWIHEFNKHATCVktirptcyd---------nqryvknkNVYDFYNIT 177 Debaryomyces hansenii
EAL03040  120 ---fgdeELYNNMSYSWKDYhgk------dssFWAHEYNKHGTCFstikpsc------------ylsntpkNQNLYDFFR 178 Candida albicans S...
EAL03056  108 ---fgdqTLYDNMNKYWTDIngn------nkkFWAHEFNKHGTCLntlnpscy-----------snykqneNVYDYYSLV 167 Candida albicans S...
NP_015202 126 slqisgeKLLEYLDLYWKSNngn------hesLWIHEFNKHGTCIstirpecyte------wgansvdrkrAVYDYFRIT 193 baker's yeast
CAG60953  126 tlpiqgeELLNNLNKYWKSNngn------hesLWIHEYNKHGTCLstlqpqcysrwnpttsqkgpkyykkkAVYDYFRIS 199 Candida glabrata
CAH00449  130 dlpingtDLLETMDMYWKSNtgd------desLWVHEYNKHGTCIrtlypdcykk------wgvagnskkqAVYDYFRIA 197 Kluyveromyces lactis
Feature 1                                                                                     
1IOO_A    109 LRLKDk--FDLLRTLQTHRIIPg--SSYTFQDIFDAIKTVS-QEN-PDIKCAevtk-gtpELYEIGICFTPna----dSM 177 Persian tobacco
1UCA_A    106 VDMRNn--YDIIGALRPHAAGPn-gRTKSRQAIKGFLKAKF-GKF-PGLRCRtdpqtkvsYLVQVVACFAQdg----sTL 176 balsam pear
CAG82527  184 VNVFEt--VNTYKFLEAAGITPdssKTYAKTDFLNALNSNFdGKQ-VHISCKs------gYISEVWYYFHLkgsvvsgQY 254 Yarrowia lipolytica
CAG78696  187 IALQKe--LNTFGFLGSKGIWPsddKTYPKQDIEAALKYHHsNSK-VHIACDks-----gALNEVWYYFHIqgaipsaEY 258 Yarrowia lipolytica
CAG90919  178 MNLYEk--LPTFQFLAAEGIVPsltQKYSKKQINDALTKYF-GKA-VYFKCNky-----kALQEVWYYHYLqgslkeeNF 248 Debaryomyces hansenii
EAL03040  179 IAIGLfnkLPTYDWLAEAGIVPtnsKTYSLSEIQSALNDKF-GAN-VFIKCDyn-----hAINEIWYYHHVkgsllqhNF 251 Candida albicans S...
EAL03056  168 YQLFQk--LPTYQWLVSAGIKPsttATYTLSQIQSALKSKF-GAE-VYIACDsn-----nAINEVWYFYNIkgsilqqNY 238 Candida albicans S...
NP_015202 194 YNLFKk--LDTFSTLEKNNIVPsvdNSYSLEQIEAALSKEFeGKK-VFIGCDrh-----nSLNEVWYYNHLkgsllseMF 265 baker's yeast
CAG60953  200 YDLFQk--LNTYEMLAKHNITPsndTSYTKSEILSALSSEF-QGTqAHINCNsq-----nALTEVWYYHQLngsilneDF 271 Candida glabrata
CAH00449  198 MKLFHd--KDTYQTLKSAGIEPsveKSYTKLEISNALKEGHsGEV-VHFLCDrh-----gSLNQIWYFHSLkgsllgeKF 269 Kluyveromyces lactis
Feature 1                         
1IOO_A    178 FRCPqs---dTCdktaKVLF 194 Persian tobacco
1UCA_A    177 IDCTrd---tCGa---NFIF 190 balsam pear
CAG82527  255 LPIDdig-ssSCp--dQIKF 271 Yarrowia lipolytica
CAG78696  259 TPVDdtipknNCp--dQVKY 276 Yarrowia lipolytica
CAG90919  249 SPIDtii-nsNCpe-eNIQF 266 Debaryomyces hansenii
EAL03040  252 LPIDsva-htNCps-tGIKY 269 Candida albicans SC5314
EAL03056  239 LPIDtvs-ktNCps-sGIKF 256 Candida albicans SC5314
NP_015202 266 VPMDslairtNCkk-dGIKF 284 baker's yeast
CAG60953  272 IPLDplrsmsRCkd-qGIKY 290 Candida glabrata
CAH00449  270 VPISalpkgsNCpd-dNIKW 288 Kluyveromyces lactis

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