NCBI CDD Logo
?
PRK05592: rplO 
50S ribosomal protein L15; Reviewed
Links
?
Statistics
?
PSSM-Id: 235523
View PSSM: PRK05592
Aligned: 889 rows
Threshold Bit Score: 107.101
Threshold Setting Gi: 161833835
Created: 9-Dec-2010
Updated: 17-Jan-2013
Structure
?
Aligned Rows:

PRK05592 is a member of the superfamily cl12022.
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148284196   1 MKLNTLFNLNGAKKCSKRIGRGIGSGKGKTCGRGAKGQKSRAk--vARGFEGGQTPLIKRLPKRGFKSMNKRNYNIINII 78
gi 258542046   1 MKLNELRDNEGSRYRKKRLGRGIGSGKGKTSGRGVKGQKAREgv-sLNGFEGGQLPIYRRLPKRGFKNIFRKVYAPVNLG 79
gi 58038836    1 MNLNELRDNEGSRYRKKRLGRGIGSGKGKTSGRGVKGQKAREgv-sLNGFEGGQLPLYRRMPKRGFVNIFRKEYAPVNLG 79
gi 148260920   1 MKLNELRDNPGARPKSKRLGRGIGSGKGKTSGKGVKGQKAREgv-sLNGFEGGQLPIYRRLPKRGFNNVNRKDYAPLNVG 79
gi 15807109    1 MKLHDLKPTPGSRKDRKRVGRGPG-GTDKTAGRGHKGQKSRSgagkGAFFEGGRSRLIARLPKRGFNNV-GTTYEVVKLS 78
gi 148554255   1 MKLNEIRDNQGARKSRVRVGRGIGSGLGKTGGRGQKGQKSRSgv-sINGFEGGQMPLHMRLPKRGFNNIFAKDYAEVNLG 79
gi 162149155   1 MNLNELRDNAGSRYRKKRLGRGIGSGKGKTSGKGVKGQKAREgv-sLNGFEGGQLPLYRRLPKRGFKNIFRKEYAPVNLG 79
gi 209545101   1 MNLNELRDNAGSRYRKKRLGRGIGSGKGKTSGKGVKGQKAREgv-sLNGFEGGQLPLYRRLPKRGFKNIFRKEYAPVNLG 79
gi 226356878   1 MKLHELKPAEGSRKNRKRVGRGPG-GTDKTAGRGHKGQKSRSgagkGSFFEGGRSSLISRLPKRGFNNV-GTTYEVIQLG 78
gi 114327237   1 MKLNELRDNHGARPKSKRLGRGIGSGKGKTSGKGVKGQKAREgv-sLNGFEGGQLPIYRRLPKRGFVNIFRKEYAPLNIG 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148284196  79 TILrlvkanKIEYGAVIDKLLLLKLKMLKKSI-NKIKLLWANpsslvlssediSLlTkLDLQFNLDEYSISARKNIIKLG 157
gi 258542046  80 AVEkaladgKLAAGAPVTEEALKKAGLVGTGKyAGVRILAEG-----------EL-T-KAVTFEVSGASASAVAAVEKAG 146
gi 58038836   80 AISkaiesgKLDKAATVNEEALRKAGLVNGSKlAGVRLLAHG-----------EL-S-HGVTIEVAGASAAALAAVEKAG 146
gi 148260920  80 TLAaliesgKIDAGQKITEATLRAAGVYAGSKlAGVRLLGRG-----------EI-S-QKVEIEVSGASASAIAAIEQAG 146
gi 15807109   79 QLQ-------DLEDTTFDRDTLEAYRLVRRKN-RPVKLLASG-----------EI-S-RAVTVHVDAASAAAIKAVEAAG 137
gi 148554255  80 AIQklvdakKLDTAGVIDHAALKAAGVARGGK-DGVRILGKG-----------EL-T-AKVSFKVAGVSAGAKAAIEKAG 145
gi 162149155  80 ALDkaiadgKIDAGTVVTEDVLRTAGLVGSGKfAGVRLLAKG-----------EL-A-RAVTIEVSGASATAVAAVEKAG 146
gi 209545101  80 ALDkaiadgKIDAGTVVTEDVLRTAGLVGSGKfAGVRLLAKG-----------EL-A-RAVTIEVSGASATAVAAVEKAG 146
gi 226356878  79 QLD-------VLEGDTFNREALELAGLVRRKN-RPVKLLATG-----------EV-T-RAVTVHVDAASAAAVKAVEAAG 137
gi 114327237  80 TLNdaieagRVDASQEITEDALRAAGLVRGGKvAGVRLLARG-----------EI-T-RAVKITVAGASAAARAAVEQAG 146

                 ....*.
gi 148284196 158 MKVINN 163
gi 258542046 147 GSVKLL 152
gi 58038836  147 GTVKVL 152
gi 148260920 147 GSVTTT 152
gi 15807109  138 GRVVLP 143
gi 148554255 146 GSVEVI 151
gi 162149155 147 GSVRTK 152
gi 209545101 147 GSVRTK 152
gi 226356878 138 GKVILP 143
gi 114327237 147 GSITTT 152
Citing CDD
Marchler-Bauer A et al. (2013), "CDD: conserved domains and protein three-dimensional structure.", Nucleic Acids Res. 41(D1):D384-52.
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap