Conserved Protein Domain Family
DUF1081

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pfam06448: DUF1081 (this model, PSSM-Id:219034 is obsolete and has been replaced by 461916)
Domain of Unknown Function (DUF1081)
This region is found in Apolipophorin proteins.
Statistics
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PSSM-Id: 219034
Aligned: 22 rows
Threshold Bit Score: -1
Created: 22-Dec-2011
Updated: 16-Jan-2013
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q29CT0  932 NSQPSE----LCFNQLE-IVGFNVCIESstSLSEIQAGsssrsgRGQtli----dqfYLSRPFSFGIYLT---TERKFNF 999  Drosophila pseudoob...
Q9TUI6  548 AARPSWa---QCRPLLR---GLSSCASL--TYPNASA---------------------LSADASFDLELRptgEVEDYVA 598  gray short-tailed o...
P04114  958 ENRQSWs---VCKQVFP---GLNYCTSG--AYSNASST------DSAsy-------yPLTGDTRLELELRptgEIEQYSV 1016 human
Q7TMA5  946 ENRKSWs---TCKPFFT---GMNYCTTG--AYSNASST------ESAsy-------yPLTGDTRYELELKptgEVEQYSA 1004 Norway rat
Q197X2  950 ENREFSt---SCKPFIS---GLNFCTKL--LYSNASSM------EAApy-------yPLTGETRFEVEIVstgEVKEYSA 1008 chicken
Q4S6S0  995 QVIPHSsgdvNCRRLFS---GVNYCTST--LHKDANDM------NAApy-------fPLNGETMFSMDISpseEVTEYTA 1056 spotted green puffe...
Q4S6S1  885 VN--------KCTPVFA---GMRYCTSL--QYVDAFSQ------DSApy-------fPFTGDSKFAMELHptgEVTEYTA 938  spotted green puffe...
Q5TZ29  918 EHVKAR----KCTPFIP---GFQYCGVM--QYSNAFSN------DAApy-------fPLTGDSKFAIEIHptgEVSSYTA 975  zebrafish
Q9U943  946 NDYKQYr---GCFDQLSpVSGLTFCGNV--SVPWVSPT------QAAaf-------yPLNGPSHLSVSIEad-dVSEYHF 1006 migratory locust
Q25490  931 KGENEYs---ACFDQLSgPLGLTMCYDMvlPFPIVNRN------DKLdsiakamgkwPLSGSAKFKLFLEkn-dLRGYHI 1000 tobacco hornworm
Q29CT0 1000 KGLHSVQPs---GS-----QQWKLDYSTPGSKVSHDTSVSFELGSKPRIYGrlsfdnsqyhfgietgitndnkelvvyGQ 1071 Drosophila pseudoob...
Q9TUI6  599 SASYELLRgepgGGl---vDQLRLAVQAEGPKPAEEATLTFRYQRSRRE-----------------------------LS 646  gray short-tailed o...
P04114 1017 SATYELQRe--dRAl---vDTLKFVTQAEGAK-QTEATMTFKYNRQSMT-----------------------------LS 1061 human
Q7TMA5 1005 SATYELLKe--dKSl---vDTLKFLVQAEGVQ-QSEATAMFKYNRRSRT-----------------------------LS 1049 Norway rat
Q197X2 1009 SANYDLQRe--gTDl---vDTLKFAVQAEGVK-QHEATLTFKYNRDRKI-----------------------------LT 1053 chicken
Q4S6S0 1057 TITYKLLNe--gKDgqqkvDSLNLALRAEGPL-PTEASATMKYNRNRNV-----------------------------FT 1104 spotted green puffe...
Q4S6S1  939 TIAYELLRe--gGDnrqkvDSVRFILRAEGAD-PTEARAVIKYNRKRNA-----------------------------VT 986  spotted green puffe...
Q5TZ29  976 TADYAYd----gKD-----DTVTFGLKAEGIT--FESIVKLTFDRQNYE-----------------------------VS 1015 zebrafish
Q9U943 1007 RAEIKKDEs---AF-----KSAAVLFDTPGSSADRKVLLLVEKKEKPHQGItahlksgwkeivaeglliddnneksvsAK 1078 migratory locust
Q25490 1001 KAVVKEDKd--aGR-----RSFELLLDTEGAKTRRSQLTGEAVYNENEVGVklgleavgkviyghiwahkkpnelvasVK 1073 tobacco hornworm
Q29CT0 1072 YEQDKDIKKSK 1082 Drosophila pseudoobscura
Q9TUI6  647 SDLQVPSLGVD 657  gray short-tailed opossum
P04114 1062 SEVQIPDFDVD 1072 human
Q7TMA5 1050 SEVLIPGFDVN 1060 Norway rat
Q197X2 1054 SDVSIPDVDVD 1064 chicken
Q4S6S0 1105 TQIVIPNFDVE 1115 spotted green pufferfish
Q4S6S1  987 ADIQIPDYDVE 997  spotted green pufferfish
Q5TZ29 1016 ADVQIPDYDLE 1026 zebrafish
Q9U943 1079 LVIESDEYSIK 1089 migratory locust
Q25490 1074 GKLDDIEYSGK 1084 tobacco hornworm
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