Conserved Protein Domain Family
Ebp2

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pfam05890: Ebp2 (this model, PSSM-Id:218797 is obsolete and has been replaced by 461770)
Eukaryotic rRNA processing protein EBP2
This family consists of several Eukaryotic rRNA processing protein EBP2 sequences. Ebp2p is required for the maturation of 25S rRNA and 60S subunit assembly. Ebp2p may be one of the target proteins of Rrs1p for executing the signal to regulate ribosome biogenesis. This family also plays a role in chromosome segregation.
Statistics
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PSSM-Id: 218797
Aligned: 29 rows
Threshold Bit Score: -1
Created: 22-Dec-2011
Updated: 16-Jan-2013
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q09958        56 DDDERELQAAFAAGLLKDGLN-----Iqva-kkRPIINKSAEMKEKLAEITKD---LPWVETLEVV--------TphSEM 118 Caenorhabditis ...
Q54P34       250 KKQRLEQQHLKsn------------------rqKYVVNDIEGMKSKLRDFKLssgkVPWVHTLAVTs-------Q--TPL 302 Dictyostelium d...
Q6DRD0        20 ELSDDELQEAFAKGLLKPGLN-----Ipqd-eqKKTINNVEGLNKCLAEFKKN---LPWIERLDLTnppavniiAkaEGR 90  zebrafish
Q99848        17 LVTDRELQDAFSRGLLKPGLN-----Vvle-gpKKAVNDVNGLKQCLAEFKRD---LEWVERLDVTlgpvpeigGs-EAP 86  human
Q9I8J6        20 ELTDKELQEAFSQGKLKPGLN-----Vvle-gkKKPFNDASGLKQSLKDLKNE---LPWVERLDVTvdpvvdttGqnGQT 90  African clawed ...
Q2F5S0        13 LDSDEELQEAFAKGLIKPGLN-----EeiekieKKYTNNVADLKVKLTEIKLN---LPWVEKLDLVtt----iaPlaPDV 80  domestic silkworm
Q29CE7        17 DNSDAELQAAFERGELKPGLN-----Vefn-gtRGRVNDITKLLAKTEAIRLQ---LPWVERLDMVns----laPlaPEL 83  Drosophila pseu...
Q16X80        18 YDEDDELREALAKGLLKPGLN-----Viak-drSEPANDPLKLKSALESLILK---APWVERLDLVnd----laPitPEL 84  yellow fever mo...
XP_001638992  12 edsdVELQKAFASGDLKVGLNkpagfIpr--aqREPFNNVEGLKRKYDQISQS---LDWLERMDVTh-------K--PTA 77  starlet sea ane...
XP_317941     30 YDSDEELRQAFLRNELKPGLN-----Vilk-eeRQPINDTIKLKAALETCTLK---APWLERMDLVndl--aplT--PEL 96  Anopheles gambi...
Q09958       119 DKK----------VEN--------------------------DDFQRELNFYKQAEKAVQIAYPRLLNLGIKVLRPTDYY 162 Caenorhabditis ...
Q54P34       303 D------------IEDi------------------------hDDFHREIAFYKQTLQSVTECEKLCAQNGLTVRRKPDFF 346 Dictyostelium d...
Q6DRD0        91 AQQ----------PEGskei-------------------naeDDFQREMYFYRQAQATVLAALPKLQKFKIPTKRPDDYF 141 zebrafish
Q99848        87 APQ----------NKDqkav-------------------dpeDDFQREMSFYRQAQAAVLAVLPRLHQLKVPTKRPTDYF 137 human
Q9I8J6        91 DPN----------TSDin----------------------aeDDFQREMCFYRQAQAAVLYSLPRLRKLKVATKRPDDYF 138 African clawed ...
Q2F5S0        81 ALQ----------MQEtaqrrknlkenskgniqydptqdpvlNEFKRENLIHRQAQAAVVEGLKKLKELGIATRRPDDYF 150 domestic silkworm
Q29CE7        84 AVQ----------LEKheqkranvfkgnaklpyvrpeedpvlNDFKREMLFHRQAQSAVLEGIQRLQELGIKTRRPDDYF 153 Drosophila pseu...
Q16X80        85 AIQ----------IEKheqkrenqfkgnkkipyvapeqdpvlNDFKREILFHRQAQAAVVEGIKRLHDLGVQTKRPDDYF 154 yellow fever mo...
XP_001638992  78 DEEndtakdittpDPSv------------------------hDDFKREMMFYKQAQEAAKLGLLKLQKLRVSTKRPEDYF 133 starlet sea ane...
XP_317941     97 AIQ----------IEKheqkrenlfkgnrkipyvkpeadtvlNDFKREILFHRQAQAATLEGIGRLHELGIATKRPDDYF 166 Anopheles gambi...
Q09958       163 AEMAKSDTHMQKVRKRLLGIQEMKERQEAFRRIREEKKFAVKVQKEVLAAKNTEKKNLAEAVKKHKKGMK-----QQLED 237 Caenorhabditis ...
Q54P34       347 AEMIKSDQQMHKIKTNIQSEKKRVETSEMIRKKREIKKFGKQVQTQKLQERQKQKSDAIESVKKWRKNREkgnvsDEFNI 426 Dictyostelium d...
Q6DRD0       142 AEMAKTDQHMQKIRKKLLLKQEVMEKSEKAKRLREQRKYGKKVQTEVIQNRQKQKKAMLSAVKKYQKGMT-----DKLDF 216 zebrafish
Q99848       138 AEMAKSDLQMQKIRQKLQTKQAAMERSEKAKQLRALRKYGKKVQTEVLQKRQQEKAHMMNAIKKYQKGFS-----DKLDF 212 human
Q9I8J6       139 AEMAKTDQHMQKIRHKLQLKQASMEKSEKAKQLRALRKYGKKVQVEVLQKRQKEKSAMVTQIKKYQKGLS-----DKLDF 213 African clawed ...
Q2F5S0       151 AEMAKTDEHMQKVRKNLMAKQAAQSRVEKVRPLREQKKIAKRVQIDTKLKQAAEKKQMLEPLKRVRKGKA-----SDLDF 225 domestic silkworm
Q29CE7       154 AEMAKTDEHMQKVRSNLMAKQQGQAKSERIKQIREQRKMGKMLAKQTKVQREAEKKDMLDKLKKFRKGKL-----KNLDF 228 Drosophila pseu...
Q16X80       155 AEMAKTDEHMQRIRKVLLAKQEGIAKSERARQLREQRRIGKLIQRQTTEKRDEERRKMLDDIKKFRKGKL-----SNLDF 229 yellow fever mo...
XP_001638992 134 AEMVKTDDHMQRVRSKLLSRQQAMERSEKAKKQREIKKYGKKVQQEVLEKRQKEKKDMLEAVKKYRKGKQ-----TAPDF 208 starlet sea ane...
XP_317941    167 AEMAKTDEHMQRIRKVLLDKQEGIAKSERIRQLREQRRIGKLIQREATEKRDEERRKMLGDIKKFRKGKLa-----nLDF 241 Anopheles gambi...
Q09958       238 MlnnvkrhgldQDDDAPTGAFG--------DRlggrggagrggaGRGGSMRNAGE---LKRKLKSDKFGYGGKKKGMKRN 306 Caenorhabditis ...
Q54P34       427 D----------LIDDIAAKKDR--------KK----------------VEKSKLPvkgDKRKKKDAKYGFGGKKRYAKTN 472 Dictyostelium d...
Q6DRD0       217 L----------EGDQNQGQKGS--------ST-------------KKQINKKNPN---AKRKYKDKKFGFGGRKKGSKWN 262 zebrafish
Q99848       213 L----------EGDQKPLAQRK--------KAg-----------AKGQQMRKGPS---AKRRYKNQKFGFGGKKKGSKWN 260 human
Q9I8J6       214 L----------EGDQTPKKTPN--------KTgg---------sAAAQKAKNTPS---AKRRYKDQKFGFGGKKKGSKGN 263 African clawed ...
Q2F5S0       226 L-----------DDKKGKNSKG--------KG-----------------VQDKIS---KKRDLKNQKFGFGGKKKGSKLN 266 domestic silkworm
Q29CE7       229 L----------EDAKALESKQK--------KT----------------------A---ENRKARNKKFGFGGKKKGLKRN 265 Drosophila pseu...
Q16X80       230 L----------DDDEEGGASKR--------KKkg---------tVRGAGGKKQVN---PKRAAKNAKFGFGGRKKGSKRN 279 yellow fever mo...
XP_001638992 209 M----------KEDDFDVNAES--------KS------------KGKPQQRNQIN---HKRKAKDKKFGFGGKKRNIKRN 255 starlet sea ane...
XP_317941    242 L----------DDDDGPRGEFRksgkgpgkGG------------KGGKGGKGGAS---AKRKARDAKFGFGGKKKGKKQN 296 Anopheles gambi...
Q09958       307 NKESF-NdlFGAP----------------------RGGFGGR------GRGGGRGGRGGR 337 Caenorhabditis elegans
Q54P34       473 DKGSV-NdmSGFSvkknnedrdysrgkggkmnkggKGGAGKG--------GASRGGSGGA 523 Dictyostelium discoideum AX4
Q6DRD0       263 TKESH-DdvSAFKak------------------maHGKGGGKvg--nrVKMNKRPGKEAR 301 zebrafish
Q99848       261 TRESY-DdvSSFRak------------------taHGRGLKRpg---kKGSNKRPGKRTR 298 human
Q9I8J6       264 TKGSY-NdvSGFRgs------------------vaHGKGPHRpgkkggKNANKRPGKNVR 304 African clawed frog
Q2F5S0       267 TREST-HnmDGFNna-------------------sKKSVNFKnktfntKKKNQRPGKSKR 306 domestic silkworm
Q29CE7       266 TKSSS-AglDAEKst------------------rrQRGAKAG------ASVNKRMGKSRR 300 Drosophila pseudoobscura
Q16X80       280 DKKSF-Mg-DGPK----------------------RKGGAAGgg--ggAGGKKRLGKSRR 313 yellow fever mosquito
XP_001638992 256 TQKST-SdvSSFNsrkh--------------skapKPNKPGV------KRKNQRPGKSRR 294 starlet sea anemone
XP_317941    297 TKESCmNdgPRRRgg------------------pgGAKGGGG------GGAKTRPGKARR 332 Anopheles gambiae str. PEST
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