3DWB,3ZUK,1DMT


Conserved Protein Domain Family
Peptidase_M13_N

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pfam05649: Peptidase_M13_N (this model, PSSM-Id:218676 is obsolete and has been replaced by 461703)
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Peptidase family M13
M13 peptidases are well-studied proteases found in a wide range of organisms including mammals and bacteria. In mammals they participate in processes such as cardiovascular development, blood-pressure regulation, nervous control of respiration, and regulation of the function of neuropeptides in the central nervous system. In bacteria they may be used for digestion of milk.
Statistics
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PSSM-Id: 218676
Aligned: 162 rows
Threshold Bit Score: -1
Created: 22-Dec-2011
Updated: 16-Jan-2013
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3DWB_A     22 CHDFFSYACGGWIKANPVPD-GHSRWGTFSNLWEHNQAIIKHLLENS---TA--SVsEAERKAQVYYRACMN-ETRI--- 91  human
Q9Y1I4    225 CEDFYSFTCNKFLEQVDLDKlGVSRFTTYTKEQQKVNEDIIEALNDVdidDDk--WsETERITKAAYQSCIDhSGKk--- 299 barber pole worm
O76751    106 CEDFYGFTCNKFIERIDLDElGRGRFTTFSQAQLEVNSDIVKALEKVdvnDEk--FsQTERITKAAFQSCVEyTLKd--- 180 barber pole worm
Q23684     91 CDNFYQFACGGWINQSVNLKyDSWNT--LYETQRTAHDQIVQAMHKIndgSYplPTnAGERAAAKMYEQCMD-TDTL--- 164 Caenorhabditis ele...
O16789     87 CEDFYKATCENYKDHQALDR------HRDCKKRKAVNKLVRGFLQRDestFTs----ESESAIKLIFGKCDEl------- 149 Caenorhabditis ele...
Q9U2T0     61 CDNFHQFACGREHEHETEDI--------YTKKTKTINNIMKRFLKKNetsRs-----KSENAMRTLYKACKTlEKNst-- 125 Caenorhabditis ele...
O16795    108 CQDFYKAACGKYSEHEVANR-------RLQKKDIIIQRMIKNFLLKNetsEs-----KSENVMRQVYRTCEG--LKNeei 173 Caenorhabditis ele...
NP_494679  85 CENFYQAACGKYNEHNVIDG-SRT-----AQKQQIVKRLIRDFLHKN---QS--STsKSENSMKLLYEKCKE-AKTI--- 149 nematode
NP_503004  99 CDNFYQSVCGKQHEHSLKSG--------LAKKHLILRNLIRETITNRkvtPTs----KSENEMRKFHGICSKyQRAnss- 165 nematode
NP_494532 100 CQDFYQHFCGKFYEHSAIGQ------GRMATKRSTLSKLIREFLLKN---KTs--TsKSENTMKQVYAKCRE-LQKIsdl 167 nematode
3DWB_A     92 ----EELR----AKPLMELIER-LGG-Wnit----------gpW---------A--KDNFQDTLQVVtahy-rtspFFSV 139 human
Q9Y1I4    300 ----SNKS----AIELLEYIKKrFGG-Vpfl----------dhKv-------dS--DLDLFGAIGYVeqer-algsFMSA 350 barber pole worm
O76751    181 ---dRKAS----VNELLQYISErFGG-Ipfl----------gqRv-------kG--GCELYREMGRIeqqr-alptFMYT 232 barber pole worm
Q23684    165 ----EQTG----LHLWERFVDE-LGGwMpelkngaleqeesfeIeldedekkrR--RFEIEDIILSAfnys--vfpLFWA 231 Caenorhabditis ele...
O16789    150 ---sRNTS----YLDIFKDIKK-IGS-Wpvl----------ehNwk------dS--MFNLDDVIAKLvklg---stdFGL 199 Caenorhabditis ele...
Q9U2T0    126 --asRNKA----LQDIFQDIQS-IGA-Wpvv----------ddKwd------eS--KFDLNDFLVNLvrlg---rknFGL 176 Caenorhabditis ele...
O16795    174 fnanMKTA----FRELFKDIQK-IGS-Wpaa----------dkNwd------eT--KLNLNEMLLNIvklg---ssnFGL 226 Caenorhabditis ele...
NP_494679 150 ----KVLGnqnlLQEIFMNIQK-IGS-Wpvl---------denW---------DgkKFNLNEMLLSLirlgvsnfgFFEI 205 nematode
NP_503004 166 -sdiAQQA----LRDIFRDVQS-IGS-Wpag----------srNwn------eS--DFNLNEMLNNLvklg---qrnFGL 217 nematode
NP_494532 168 -nsiPPQA----LLDIFSDIKK-IGA-Wpvldk----------------dwdgS--KFNLNEMLRQLvnlgethlgFFHF 222 nematode
3DWB_A    140 YVSADSKNsNSNVIQVDQsG-LGLp--SRDYYLNKTe--nEKVLTGYL-NYMVQLGKL---L------G-GgdeE----- 198 human
Q9Y1I4    351 WVTVDHKDiTKNTLYILQ---PTLpmpREFYVLPQF----ATELDNRS-KAILKVMKKfaaD--------Vl-vDpdkyq 413 barber pole worm
O76751    233 WVNVDHKNvSRNSYYISQ---PTLpmpREFYVLPQF----APELDART-KAIENVMKAfasD--------Il-kDpskyd 295 barber pole worm
Q23684    232 GVEVNYLNsKEHLITIYE-QlPILlapEKYHYNKELt--pEMIYGKMEgPPVTRALQQvgeElsavlgFdSt-dE----- 302 Caenorhabditis ele...
O16789    200 -----------FKLELRKl--------AFGHFAVFVsskqEQNIHQLE-KTILGILKAngiQ--------Qd-rK----- 245 Caenorhabditis ele...
Q9U2T0    177 -----------FQMARYVn--------VRNFAIGPEa--aWRHNVDLG-KTISEILKAnsvQ--------Tn-nK----- 220 Caenorhabditis ele...
O16795    227 -----------FQIRPTE---------VPFLEVAPDmarsPKVSANFQ-QIIFDILEKnglQ--------Pd-eN----- 271 Caenorhabditis ele...
NP_494679 206 IISSDA------------------------FVEIKPar-nFPTRENLS-DIISKVFLG---N------G-Fq-------- 241 nematode
NP_503004 218 -----------FQISFKYr--------DQLLISAEEh---RRNYSKLE-PTILNIFETnglV--------Pd-rI----- 260 nematode
NP_494532 223 ----DFI--ARPYVLIKPp--------LKQGVQ-------KSVLEKVV-KMILEANEI---K------M-D---Q----- 262 nematode
3DWB_A    199 -AIRPQMQQILDFETALANITIPQ--EKRRDEELI--Y--HKVTA-------AELQTL-APAINWLPFLNTIFYpve--- 260 human
Q9Y1I4    414 nSIKMAAQEVAKMEQKIAQATWPD--KELSNYAQQ--Y--NKFDV-------ETLNDT-YPNLNLKNYTRALLEsv---- 475 barber pole worm
O76751    296 kMIKTAAREVTQIEQKIAMASWPD--DELRNHEQQ--Y--NPYELfapsegkIALQDA-FPNIRFGKYIAGLMEtatgg- 367 barber pole worm
Q23684    303 -KVRMMIANMIYLEYQITMAGSTFykEKKER------Y--TVVML-------RELQEI-APAINWHYFLSRLVGe----- 360 Caenorhabditis ele...
O16789    246 -ELSDDLKDYSDFKNHLKEFYQEEtyIEYRLYA-------------------GSI----VENLGISSLTTQMALkstgld 301 Caenorhabditis ele...
Q9U2T0    221 -KLLDDLAEYVNLEKALSQHKFNTvqPGYIF---------------------SERSDF-VSSVNFSRLVLEMMSpdkrtl 277 Caenorhabditis ele...
O16795    272 -VIADDVEDYITLEETLSQYAYDYnaEKVQF---------------------SKLQAQ-VPSLKLEKIIEEMMNpnrkkl 328 Caenorhabditis ele...
NP_494679 242 -------pNITAIENDLREYENLQ--RELKSITSD--YptEELSF-------AELQTL-VPS------------------ 284 nematode
NP_503004 261 -QLLKDLEGFASLEALLKNHYYLDnmDKMKP---------------------AVLDDL-VPSVDFMGLVKAMISpgkehl 317 nematode
NP_494532 263 -GFSEDLDEYFELSNRIKIDKLPR--TSRSIVGLLpdV--RRINF-------RGLILEmMPRSKMNRFLGTLFQkv---- 326 nematode
3DWB_A    261 -------inESE--PIVVYDKE--YLEQISTLINTTDRC-----LLNNYMIWNLVRKTSSFLDQRFQDADEKFMEv---- 320 human
Q9Y1I4    476 --------gSPLikEVIITQPS--YIGFLNILFAKHQWYk---eKYINYLIVQMLFDEADYLGSDYLEEAKRSGYvpyaq 542 barber pole worm
O76751    368 -----vpvsPVFigDVIVTNPA--YMGFLNTLFRQTNIQmn-qyPFVNYIIVHMLFEDAEHLGDKYLRIAKDADYvtyaq 439 barber pole worm
Q23684    361 ---------NLShsEPIALKTGtqWIPILSAIVEKLKQSrsgvaVLKNYVKWKTIMFHLAYASPKCRDGLLWMAVs---- 427 Caenorhabditis ele...
O16789    302 vfnhvnqrtLITnsSLFFGE-----ENNLGMIIQKTPKR-----TLANFLIFHFIDVMTTDLANATKA------------ 359 Caenorhabditis ele...
Q9U2T0    278 f-pevyqimYLTntSLFFGK-----NNNLETIIRNTSKR-----ALANYLIFKFIDTSIADLTYGSPSAF---------- 336 Caenorhabditis ele...
O16795    329 lvtkvkprmVAHkhSLFFDE-----KMNLEKLLKSTPKR-----TLANYLIFYYMDHAMNGLSVHDNVIKKRN------- 391 Caenorhabditis ele...
NP_494679 285 ----------------------------LERLIQTTPNR-----SLVNYLIFNYLKSVMLE-------------Yk---- 314 nematode
NP_503004 318 m-pkielktSVLnqTLFNDE-----NMNLEAIILDTPKR-----TLANYLIFNFIDSSLDHLVFETTSQKGNT------- 379 nematode
NP_494532 327 -------vtYHH--PLFVRD-N--ETNHLDTIIRSTSNR-----ALANYLIFNFIHSSIKFLTFGLKSDR---------- 379 nematode
3DWB_A    321 -----MYGTKKtS-LP------RWKF-CVSDTENNlgfALGPMFVKA--TFAED-SKSIATEIILEIKKAFEESLS-TLK 383 human
Q9Y1I4    543 rqghgLARIGR-RlSRqfdgknEANLkCVDLLTTYmpfGTGYVYVKS--RKNREeTINDVKLQTELVMEAFLKKMLsSLT 619 barber pole worm
O76751    440 rkgvgITRSGR-KySRvfdertDARMkCVDTITTYmpyGTGYVYVNS--REDRDqVVEDVKQQTELIMKTFLKKMLsTLS 516 barber pole worm
Q23684    428 ----lYSGAAS-Q---------RKEF-CVLRLSGIfplSLPSILRKIdgIDHTEkNVKAVQNIADRIQEKYEEMVRsSNL 492 Caenorhabditis ele...
O16789    360 ---------------------------CKETLIDLlprASIQVLSRN--FVNED-AQDDMVKMAQDLKTKITEMID-NSP 408 Caenorhabditis ele...
Q9U2T0    337 ---------------------------CEQKVINFlprAALRAFYRN--FISKE-NRKKITKLTEATQVQLLKIIG-ATD 385 Caenorhabditis ele...
O16795    392 ---------------------------CEKLVIEYlpkASLRVFVRN--HFEKG-NLKIVDEMAEETKKSFIEMLQ-EST 440 Caenorhabditis ele...
NP_494679 315 ----rLP----------------EEQ-CEGVVIDFlprASTRVFVQN--FLDKE-NRKYVAGMIEDVKMGFIDMIQ-EST 369 nematode
NP_503004 380 ---------------------------CEDKVITYlprASLRVFIRN--YVDKE-NRDLITQLAEKTRIALHTLVQ-NST 428 nematode
NP_494532 380 ------------------------ER-CEKIVVQElprPSLRVFMRN--CVDKG-NREEVAKLTETVKENVLEMIR-ESD 430 nematode
3DWB_A    384 W-------MDEETRKSAKEKADAIYNMIGYP 407 human
Q9Y1I4    620 W-------MEG-SYKIAEKKIKEMRKNYGWP 642 barber pole worm
O76751    517 W-------MQGESYRRAEKKINEMHRNYGWP 540 barber pole worm
Q23684    493 F-------SDRETRENVIDKVNNMTKFIGFP 516 Caenorhabditis elegans
O16789    409 FftkfhlvFDAEEQKKLIQKVKAIGIVTEYP 439 Caenorhabditis elegans
Q9U2T0    386 W-------MSIKSKKIAMDRVSSMNMVIGYP 409 Caenorhabditis elegans
O16795    441 W-------LGADSKKNAILKLEKMGKMIGYP 464 Caenorhabditis elegans
NP_494679 370 W-------LNEESKKVAVQKVKNIKSMIGYP 393 nematode
NP_503004 429 W-------LKAESKQLALDKINAMGKMIGYP 452 nematode
NP_494532 431 S-------FTPSVKKRVLKKVEAIGAIIGYP 454 nematode
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