2XZN,3BBN


Conserved Protein Domain Family
Ribosomal_S3_C
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pfam00189: Ribosomal_S3_C (this model, PSSM-Id:215779 is obsolete and has been replaced by 425514)
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Ribosomal protein S3, C-terminal domain
This family contains a central domain pfam00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.
Links
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Statistics
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PSSM-Id: 215779
Aligned: 126 rows
Threshold Bit Score: -1
Created: 21-Dec-2011
Updated: 16-Jan-2013
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
2XZN_C       107 AMNYKLLKDV-PVRLAANYIIKSViQDG-AKGCEIIISGKLKQQRAKTMKFKQGYMicTGQPKNDYIDVAVRHVFFKQGI 184 Tetrahymena the...
Q74MZ4        97 RLAMGIERNIrAYRRLAQRYLETI-MNAgAIGAEIVIAGRLSGQRGKTWRFKAGNLrkTGTIGQFELDRAFNIAYLKPGV 175 Nanoarchaeum eq...
A5UL83        97 KIANMLQRGM-HFRRVAYSTIRRI-MGAgAQGVEVTISGKIRGSRSAVAKFVEGYIkkCGEPSIRLVEEGFATVQLKPGV 174 Methanobrevibac...
O28360        97 LLARALERGW-YFRRAGYRFLYRI-MEAgAKGCEIEISGKLVSERARTEKFVAGTIvhTGDPAESMVQKGFDIAIKKLGV 174 Archaeoglobus f...
Q649A8        98 RIASALERGW-YFRKAAHSTLRRI-MGAgALGCRIVLSGKLTGPRSRIEKIVEGYIvhAGKPAEEIVHTGFATAVRKLGT 175 uncultured arch...
Q46GA1        98 RLAASIERGW-YFRKAGHNTLRAV-MNAgALGCEVVISGKLTGARSRVEKFVDGYIkhSGNPVDEVVDEGFAVAIKKLGT 175 Methanosarcina ...
A3CT03        98 RLANALERGW-YFRKAGSSTIRRI-MESgALGCEVIVAGKLTGSRSRTQKFTEGYIkhCGEPSETIVEKGYALAIKKLGT 175 Methanoculleus ...
Q673S3       102 RLASSLERGW-FFRRAGHSTAQNI-MDAgARGCLIILSGKISGPRHRVQKFQQGHIkfCGETALQFMDEGFSTAVKKLGT 179 uncultured mari...
A6UWU3        97 KIASSLERGM-HFRRVAHSAIRRV-MAQgAKGVVVIVSGKLTGERSRTEKYMEGYMkhCGEPSEELVDQCHKIAKLKLGV 174 Methanococcus a...
YP_002567088  98 RLANALERGW-YFRKAGHTTIDRI-MDAgALGAEIVLSGKVTGaRSRVEKFNRGYIkhNGEPAQEVVDHGQGVAVMKLGT 175 Halorubrum lacu...

2XZN_C       185 MGVKVKI 191 Tetrahymena thermophila
Q74MZ4       176 AGIHVTI 182 Nanoarchaeum equitans Kin4-M
A5UL83       175 LGIYVRI 181 Methanobrevibacter smithii ATCC 35061
O28360       175 LGVSVRI 181 Archaeoglobus fulgidus DSM 4304
Q649A8       176 IGCKIQI 182 uncultured archaeon GZfos35D7
Q46GA1       176 LGCKVRI 182 Methanosarcina barkeri str. Fusaro
A3CT03       176 IGVQVKI 182 Methanoculleus marisnigri JR1
Q673S3       180 VGCTVRI 186 uncultured marine group II euryarchaeote DeepAnt-JyKC7
A6UWU3       175 VGVTVKI 181 Methanococcus aeolicus Nankai-3
YP_002567088 176 IGVNVKI 182 Halorubrum lacusprofundi ATCC 49239
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