3F1E,1RQ0,2B3T,1ML5,2B64


Conserved Protein Domain Family
PCRF

?
smart00937: PCRF 
Click on image for an interactive view with Cn3D
This domain is found in peptide chain release factors.
Statistics
?
PSSM-Id: 214923
Aligned: 465 rows
Threshold Bit Score: 73.6512
Created: 13-Jul-2011
Updated: 2-Oct-2020
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
3F1E_X       87 ELMEELP-------AEE-REALKpeleeAAKKLDELYHQTLLNF-PHAEKNAILTIQPGAGGTEACDWAEMLLRMYTRFA 157 Thermus thermoph...
YP_072523    61 nkikdlsdlceivenEKdINSLEiefnvLEKQYKNLLTISYF-KeELDINSAFLTIHSGAGGTEACDWVAMLYRMYSRYA 139 Borrelia garinii...
YP_815130    45 ELLKADPdpelseeLSKeMFSLSqs-------fHDYELSLLLSd-KYDQHNALMEIHPGAGGTEAMDWADMLLRMYQRYA 116 Lactobacillus ga...
AAM91577     93 QLGEMDAi------DYSlFEQAYdssldVSRSLHHYEMSKLLRD-QYDAEGACMIIKSGSPGAKSQIWTEQVVSMYIKWA 165 thale cress
NP_787326    84 TLLENEHd-------AGlLDEGSrkaklLLEEANHLLIQNMLNN-EYDCYPAVLTIRAGAGGIDAADFAQMLLRMYIRWA 155 Tropheryma whipp...
XP_636549   142 EMSKNIGd-----nDw--LKETRslinqLFSNCSELEVKALMNG-KDDSKGCLLEIQAGAGGNDSMDWTKILFEMYCKWG 213 Dictyostelium di...
YP_193581    45 DLLREEPd-------SDlQTEVEtdliaLQEAFHNYELDLLLSG-KYDSHNALFEIHPGAGGTEAMDWGQMLLRMYQRYC 116 Lactobacillus ac...
YP_618696    45 ELLRLEAd-------ADlQKDTEdqlakLQEEFHQYELNLLLSG-EYDDHNALMEIHPGAGGTEAMDWGNMLLRMYQRYC 116 Lactobacillus de...
ZP_01544390  90 ELLSEEd-------dADmHAELDtdiekTEKDLEKYNLNQLLTE-KYDSNNAILEIHPGEGGTESTDWASNLYRMYTRWA 161 Oenococcus oeni ...
NP_867328    45 EMADE---------DESiVDEVRseidrLEVVLDDLELKALLNG-PNDSAGAIVTINARDGGTDANDWADMLLRMYSAWA 114 Rhodopirellula b...
3F1E_X      158 ERqGFQVEVVD---LTPG-PeAGIDYAQILVKGenAYGLLSPE 196 Thermus thermophilus
YP_072523   140 ERkKYKTELID---LLEA-E-GGIKSITIEIKGeyAYGLLKSE 177 Borrelia garinii PBi
YP_815130   117 ANhNLKFEIED---YEPGeE-AGVKSVSVRIQGknAFGLLKSE 155 Lactobacillus gasseri ATCC 33323
AAM91577    166 ERlGQNARVAEkcsLLSN-K-SGVSSATIEFEFefAYGYLLGE 206 thale cress
NP_787326   156 QKhSSEAIVMD---ISYA-EeAGIRSATLRIDLpfAFGKLHQE 194 Tropheryma whipplei str. Twist
XP_636549   214 ARkGYNVEIID---TADG-Ef-GYRHASLKIDGhnAYGWLRTE 251 Dictyostelium discoideum AX4
YP_193581   117 DTaGFKFEIND---YEPG-EeAGVKSVTARVVGhnAYGMLKSE 155 Lactobacillus acidophilus NCFM
YP_618696   117 DSrGLKFEVNN---FEPG-DeAGLKSVSVRISGknAYGLLKSE 155 Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842
ZP_01544390 162 QAhDFKVEVTD---YQTG-DvAGIDSATLRIIGhnAYGFLRSE 200 Oenococcus oeni ATCC BAA-1163
NP_867328   115 VGqEYKIELLD---RQEN-EeAGINHASIAVRGpmAYGYLKGE 153 Rhodopirellula baltica SH 1
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap