Conserved Protein Domain Family
DUF3250

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pfam11618: DUF3250 
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Protein of unknown function (DUF3250)
This family of proteins represents a protein with unknown function. It may be the C2 domain from KIAA1005 however this cannot be confirmed.
Statistics
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PSSM-Id: 204692
View PSSM: pfam11618
Aligned: 12 rows
Threshold Bit Score: -1
Threshold Setting Gi: 0
Created: 22-Dec-2011
Updated: 16-Jan-2013
Structure
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Program:
Drawing:
Aligned Rows:
pfam11618 is not assigned to any domain superfamily.
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2YRB_A         44 TFCTYAFYDFELQTTPVVRGLHPEYNFTSQYLVHVNDLFLQYIQKNTITLEVHQAY--------STE--YETIAACQLKF 113
gi 296434514  631 TFCTYAFYDFELQTTPVVRGLHPEYNFTSQYLVHVNDLFLQYIQKNTITLEVHQAY--------STE--YETIAACQLKF 700
gi 124458873  617 TFVTIDFYDHETQHTSVSEGTSCFYNLQISFKVDADANFIQYLESNYLKLELYVSQ--------GSE--PTKIGSGLIQL 686
gi 259016462  807 FFFSLEFFDFQLETTPIMDAKQHNMDFTTVYDVLVSNLLIHYLQTNGIVIEMYRPA--------SDC--YKLLAAATISL 876
gi 122018713  224 IFCSVDFLLHETVTTPIVTGLNGFLDTTVSFCVAMDALLQYYLRSRSLLVQLHRVR--------SQDeiHKIVSAKSDTH 295
gi 74831795   664 VFCSIDFLLHETVTTPVVAGLNAFLDTSVSFCVAMDALLLCYLQTRQLLLQLHCVR--------SQEelGETMVDNDETG 735
gi 82268398   755 TFCTYSFLDFETHSTPVASQSQPRYSFTSRYALTRRHLRRLEAPGSGVRLELHQGLg-------GVR--FVTRASGLIAL 825
gi 296452882  652 TFCTYSFYDFETHCTPLSVGPQPLYDFTSQYVMETDSLFLHYLQEASARLDIHQAM--------ASE--HSTLAAGWICF 721
gi 44888535   616 TFCTYSFYDFETHCTPLSTGPQPLYDFTSQYVVQADYLLLHYLQGTSVRLDLHQAM--------ASE--YHVLATGWISL 685
gi 82258213   549 TFCTYTFFRFDTHGTLVVRGQHPKYSFTSRYVVGMEEAFLDYVSSCAVLVELHQRLv-------GRE--WRTMATAHLPL 619
gi 120538680  624 TFCTYAFYDFELQSTPVVHGGRPDYSFSSQYLVRVDDLFLNYLHTSSITVEIQLAE--------GLS--FRTVAAGQIRL 693
gi 157869836  749 mFCSADFLVHETVTTGTVRGFNGFFEVTASFCVSMDALLFYYLHTRQLLIQLHRVRnaeeaaamTLA--AAAGAGDEETH 826
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
2YRB_A        114 HEIL-----EKSG-RIFCTASLIGTKGDipNFGTVEYWFRLRV 150
gi 296434514  701 HEIL-----EKSG-RIFCTASLIGTKGDipNFGTVEYWFRLRV 737
gi 124458873  687 KDLVyenknDTISkVISGSLTFHGINNQ--MIGIVEFKARMRY 727
gi 259016462  877 IPLF-----EDSVlRKFCSEIMLKSVDTgvEMCTLRYEIEVSQ 914
gi 122018713  296 EPLY--------AeRLCATLAEGSISLS--AFVLDEKCRQAQR 328
gi 74831795   736 KLCI--------GeRLYTTVAEGSVSLS--ALVADpkqleadr 768
gi 82268398   826 RGTL-----ERPGqRTAGRVSLSGPGGE--TVGVVDYWLRLFS 861
gi 296452882  722 DRVL-----ETVE-KVHGLATLIGAGGE--EFGVLEYWMRLRF 756
gi 44888535   686 DKVL-----GTVE-RVHGLATLAGAGGE--DLGVLEYWMRLCL 720
gi 82258213   620 RPLL-----EREG-TAEGSVPLVAVTNEalAFGALDYCVRLKL 656
gi 120538680  694 NQLL-----ERDG-KVFSTIQLVGVSDEiqVFGSLEYWLKLKV 730
gi 157869836  827 LSAT-----DAVDtGTTHSAHGASSSGS--MHPCLRMAEHMFE 862
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