1TKL,3EJO,2AEX


Conserved Protein Domain Family
Coprogen_oxidas

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pfam01218: Coprogen_oxidas (this model, PSSM-Id:189893 is obsolete and has been replaced by 460116)
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Coproporphyrinogen III oxidase
Statistics
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PSSM-Id: 189893
Aligned: 95 rows
Threshold Bit Score: -1
Created: 21-Dec-2011
Updated: 5-Jan-2012
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1TKL_B        12 QQMEALIRRKQAEITQGLESI-D---------TV--KFHADTWTRgNDG-----GGGTSMVIQDGTTFEKGGVNVSVVYG 74  baker's yeast
Q08UM7        13 VRMAEFIRQLQDEICAGLETL-Dg--------KG--RFREDAWER-AGG-----GGGRSRVLEGGSVLEKAGVNTSVVYG 75  Stigmatella aur...
Q2IJF0        15 AGMAETVRALQEEISAALERA-Dg--------AA--RFAADRWER-PGG-----GGGESRVLQDGALLEKAGVNVSEVHG 77  Anaeromyxobacte...
A8GQB7         7 EITSNWFTNLRDLLCKEFEKIeEeyaqtkclkPA--KFVRTSWQR--NG-----GGGGIMSLMKGEVFEKVGVNISTVFG 77  Rickettsia akar...
Q2N8L5         9 EQARAWFESLRDQICAEFEAIeRea-----gsDA--AFQYTPWDR-EEAgnddpGGGVQGLMK-GKVFEKVGVNVSTVRG 79  Erythrobacter l...
ABV27411      21 ERAEAFFKDLQDEICMALEQL-Dg--------GA--QFREDLWER-EGG-----GGGRTRVIVEGRVFEKGGVNFSSVYG 83  Candidatus Chlo...
YP_001044211  10 ARASEWFRELRNRILAAFEGLeDaatggspadAApgRFEVTETSRea------gGGGLMSVMRGGRVFEKVGVNVSTVHG 83  Rhodobacter sph...
YP_915545      8 QEAAAWFRALRDRIVAAFEALeDrgp----gaVPpgRFEIRETRRge-----dgGGGLMSVMRGGRVFEKVGVNWSAVHG 78  Paracoccus deni...
ZP_01013122   10 ARASAWFRDLRDQIVAAFEALeDsqttgpfaeNApgRFEVKSTTR-TSDdgsdaGGGLMSVMRGGRVFEKVGVNISTVYG 88  Rhodobacterales...
ZP_00954066   10 TRAAEWFRSLRDQIVEAFETLeRdhaegplsdAApgTFEVTPTKR-SSDdgsdaGGGLMSVMRGGRVFEKVGVNVSTVFG 88  Sulfitobacter s...
1TKL_B        75 QLSPAAVSAM--KADH-----KNLrlpedpktglpvtdgvKFFACGLSMVIHPVNPHAPTTHLNYRYFetwnqdGTPQTW 147 baker's yeast
Q08UM7        76 QL--EEAFAH--KLQG-----EGR----------------YFWAGGLSLVLHPRNPHVPTVHANFRFI------HQGPKA 124 Stigmatella aur...
Q2IJF0        78 EL--PDALAR--KVQG-----EGG----------------AFTAVGLSVVVHPASPMVPTAHMNVRLL------SRGGGA 126 Anaeromyxobacte...
A8GQB7        78 EFSPEFRS------EIpg-aeLDG----------------KFSATGISLVAHLKSPLIPAMHFNTRYI-------ETSKS 127 Rickettsia akar...
Q2N8L5        80 SFAPEFAA------TIngasvEHP----------------GFTATGISLVAHMANPHVPAVHMNTRFL-------TTQAA 130 Erythrobacter l...
ABV27411      84 IMSEKLAARM--MPD------EGR----------------NFYATGISLVIHPRNPMVPTVHANFRYL------EQGNSA 133 Candidatus Chlo...
YP_001044211  84 TLAPRAQQAMaaR-GVpg-maEDP----------------RFWASGISLVAHMQNPHAPAVHMNTRMF------WTPHAW 139 Rhodobacter sph...
YP_915545     79 QLSAAARQAMaaR-GVpg-ieADP----------------RFWASGISLVAHMQNPHAPAVHMNTRMF------WTPGAW 134 Paracoccus deni...
ZP_01013122   89 VLGEAAQKSMaaR-GVpg-ieADP----------------SFWASGISLVAHMQNPHSPAVHMNTRMF------WTPGAW 144 Rhodobacterales...
ZP_00954066   89 TLGERAQVAMaaRKGIpg-maEDP----------------RFWASGISLVAHMQNPHAPAVHMNTRMF------WTPHAS 145 Sulfitobacter s...
1TKL_B       148 WFGGGADLTPSYLYEEDGQLFHQLHKDALDKHDTALYPRFKKWCDEYFYITHRKETRGIGGIFFDDYDER---D---PQE 221 baker's yeast
Q08UM7       125 WFGGGADLTPYYLYDEDAVHFHRTLKAVCDRYDPSYYPRFKSTCDKYFYLRHREECRGVGGLFFEDLGGQ---D---LER 198 Stigmatella aur...
Q2IJF0       127 WFGGGADLTPYYLFEEDCRHFHAVLRDACERHEPGSYARHKRAADAYFYLRHRREHRGVGGIFYED-SGD---D---LER 199 Anaeromyxobacte...
A8GQB7       128 WFGGGGDLTPFYPEENETEKFHAAFKEACDKYDSGYYPKFKKQCDEYFYLKHRKEPRGVGGIFYDYLNSG---N---FEQ 201 Rickettsia akar...
Q2N8L5       131 WFGGGADLNPPIPYEQDTAEFHARFRAACAAHNPTYYERFRKWADDYFFIPHRGVHRGVGGIFYDHLECD---DaaaFER 207 Erythrobacter l...
ABV27411     134 WFGGGADLTPYYPYREDVIHFHQTLKEACDKHHPDYYPRFKQWCDEYFFLPHRNETRGVSGIFFDYLKADehtD---LEA 210 Candidatus Chlo...
YP_001044211 140 WFGGGSDLNPCLDYPEDTEHFHATLRHACEAHGADYYPRFKAWADEYFFIPHRGRARGVGGIFFDDLNTG---D---WEA 213 Rhodobacter sph...
YP_915545    135 WFGGGADLNPCLERAEDTAHFHATLRAACAPHGADYYDRFRAWADEYFFVPHRGRARGVGGIFYDDLNTG---D---WRA 208 Paracoccus deni...
ZP_01013122  145 WFGGGADLNPCIEYDEDTAHFHAAMKAGCDPHDPAYYDRYKAWADEYFYIPHRRRARGVGGIFYDDHNTG---D---WEA 218 Rhodobacterales...
ZP_00954066  146 WFGGGSDLNPCIEYDEDTAHFHAVQKAHLDPHGSDLYPRLKAWADEYFYIPHRHRARGVGGIFMDDHATG---D---WEA 219 Sulfitobacter s...
1TKL_B       222 ILKMVEDCFDAFLPSYLTIVKRRKDMPYTKEEQQWQAIRRGRYVEFNLIYDRGTQFGLRTPgSRVESILMSLPEHASWLY 301 baker's yeast
Q08UM7       199 ELAFVMDAGRAFLPAYLPIAERRKDVASTEPQRFWQEVRRGRYVEFNLVYDRGTVFGLETK-GRTESILMSLPPQVRWLY 277 Stigmatella aur...
Q2IJF0       200 ELAFAGEMGRAFLRAYLPILERRRAAPFGEAERRWQEIRRGRYVEFNLVWDRGTVFGLETS-GRAESILMSLPPRVRWVY 278 Anaeromyxobacte...
A8GQB7       202 DFSFTQDVGMALLSVYPEIVRSKLFLPWTAEQKEYQLIRRGRYVEFNLLYDRGTKFGLMTD-GNVEAILMSLPPE----- 275 Rickettsia akar...
Q2N8L5       208 NFAFTQDVGKAFLDIFPQLVRRRMESDFTPEDKQTQLEWRGRYAEFNLVYDRGTLFGLKTG-GNIDAILMSLPPEAV--- 283 Erythrobacter l...
ABV27411     211 IFAFVQTAGRAFLPAYLPIVERRQHEPYGEAEREFQLIRRGRYVEFNLIYDRGTVFGLETR-GRTESILMSLPPLAKWLY 289 Candidatus Chlo...
YP_001044211 214 DFAFTRAVGEAFLPAFVPLVERRMETPWTEADREAQLIHRGLYAEYNLVYDRGTKFGLETG-HDANAVLMSLPPLAK--- 289 Rhodobacter sph...
YP_915545    209 DFAFTKAVGEAFLPAFLPLAETRMAEPWGEAEKDAQLVHRGLYAEYNLVYDRGTKFGLATG-HDPEAVLMSLPPMAK--- 284 Paracoccus deni...
ZP_01013122  219 DFAFTQDVGRAFLPAFLPVTEKRRDTPWDAADKDTQLVHRGLYAEYNLVYDRGTKFGLATS-HDPDAVLMSLPPLAK--- 294 Rhodobacterales...
ZP_00954066  220 DFALTQDIGRAFLPAYLPLVQKRITQDWSEADKEAQLVHRGLYAEYNLVYDRGTKFGLETG-HDANAVLMSLPPLAK--- 295 Sulfitobacter s...
1TKL_B       302 NHHPAPGSREAKLLEVTTKPREWV 325 baker's yeast
Q08UM7       278 DHHPVPGSEEERLVDVLRNPRDWA 301 Stigmatella aurantiaca DW4/3-1
Q2IJF0       279 DHRPAPGSREAALLDVLRAPRDWA 302 Anaeromyxobacter dehalogenans 2CP-C
A8GQB7       276 -----------------------V 276 Rickettsia akari str. Hartford
Q2N8L5       284 ----------------------WV 285 Erythrobacter litoralis HTCC2594
ABV27411     290 DYRPAPGSREAEAMTFF-TPQDWL 312 Candidatus Chloracidobacterium thermophilum
YP_001044211 290 ----------------------WV 291 Rhodobacter sphaeroides ATCC 17029
YP_915545    285 ----------------------WV 286 Paracoccus denitrificans PD1222
ZP_01013122  295 ----------------------WV 296 Rhodobacterales bacterium HTCC2654
ZP_00954066  296 ----------------------WI 297 Sulfitobacter sp. EE-36
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