Conserved Protein Domain Family
PRK11742

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PRK11742: PRK11742 (this model, PSSM-Id:183294 is obsolete and has been replaced by 236965)
bifunctional NADH:ubiquinone oxidoreductase subunit C/D; Provisional
Statistics
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PSSM-Id: 183294
Aligned: 164 rows
Threshold Bit Score: -1
Created: 9-Dec-2010
Updated: 15-Dec-2010
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
116515040   1 MILSLFKLFGKENFfIQDSYLESPILWIDSTILIQVIGFLKkNNTCSYEILFDLFGIDERTRKNVKSFPNADFTVSYYFF 80 
162286749  22 IVEELKTKFGENFY-VQATFEEFPTVWVERARVQEVLMFLR-KVERPYVMLFDLSAMDERLRQHRDGLPASDFTVFYHLL 99 
184157031  22 IVEELKTKFGENFY-VQATFEEFPTVWVERARVQEVLMFLR-KVERPYVMLFDLSAMDERLRQHRDGLPASDFTVFYHLL 99 
213156538  22 IVEELKTKFGENFY-VQATFEEFPTVWVERARVQEVLMFLR-KVERPYVMLFDLSAMDERLRQHRDGLPASDFTVFYHLL 99 
169634179  22 IVEELKTKFGENFY-VQATFEEFPTVWVERARVQEVLMFLR-KVERPYVMLFDLSAMDERLRQHRDGLPASDFTVFYHLL 99 
169797056  22 IVEELKTKFGENFY-VQATFEEFPTVWVERARVQEVLMFLR-KVERPYVMLFDLSAMDERLRQHRDGLPASDFTVFYHLL 99 
215484517  22 IVEELKTKFGENFY-VQATFEEFPTVWVERARVQEVLMFLR-KVERPYVMLFDLSAMDERLRQHRDGLPASDFTVFYHLL 99 
296112933  11 VLEELTA--NNHTYiTQSTADGIPTIWVACDELLDVLLFLR-TLPKPFAMLVDLSAIDERLRQYRHGLPDSDFTVFYHLM 87 
148653494  22 VLRELGHKFAGKFt-EQFTFDGIPTIWVSRQDLLDVLMYLR-TLPKPYVMLLDLSAMDERLRQHRDGLPASDFTVFYHLM 99 
93005405   18 VIKELEEKYAGKFV-VQHTVDDIPTVWVARADLLDVLLFLR-KLPKPYVMLFDLSAIDERLRQHRQGLPDSDFTVFYHLM 95 
116515040  81 SISNNSDLILKVALLKEHlQLPTISSIFLNANWYEREIWDMFGIVFNNHPYLTRILMPKNWVGHPLRKDYSSHATEFDEF 160
162286749 100 SLERNSDIRIKVALNENDlNLPTATNIWPNANWYEREAYDMFGINFEGHPMLRRILLPTYWEGHPLRKEYSARATEYTPY 179
184157031 100 SLERNSDIRIKVALNENDlNLPTATNIWPNANWYEREAYDMFGINFEGHPMLRRILLPTYWEGHPLRKEYSARATEYTPY 179
213156538 100 SLERNSDIRIKVALNENDlNLPTATNIWPNANWYEREAYDMFGINFEGHPMLRRILLPTYWEGHPLRKEYSARATEYTPY 179
169634179 100 SLERNSDIRIKVALNENDlNLPTATNIWPNANWYEREAYDMFGINFEGHPMLRRILLPTYWEGHPLRKEYSARATEYTPY 179
169797056 100 SLERNSDIRIKVALNENDlNLPTATNIWPNANWYEREAYDMFGINFEGHPMLRRILLPTYWEGHPLRKEYSARATEYTPY 179
215484517 100 SLERNSDIRIKVALNENDlNLPTATNIWPNANWYEREAYDMFGINFEGHPMLRRILLPTYWEGHPLRKEYSARATEYTPY 179
296112933  88 SLERNSDIRIKVALKEGE-HVPSATKIYPNANWYEREVWDMFGVVFDGHPHLTRILLPKYWEGHPLRKEYHARATEFTPY 166
148653494 100 SLERNSDIRVKVALSEDDlKVPTATKIWPNANWYEREVWDMFGIVFDGHPHLTRILLPKYWEGHPLRKEYHARATEFTPY 179
93005405   96 SLERNSDVRIKVALSEEDlNVPSATQIWPNANWYEREVWDMFGIVFTGHPHLTRILLPKYWEGHPLRKEYHARATEFTPY 175
116515040 161 YFTKQKEDLAMESLKFCPKSWGLENNdSNNSEYMFLNFGPNHPSSHGAFRIVLQLHGEKIINCIPDIGYHHRGAEKIAER 240
162286749 180 MQDKAKQDFEQEHLRFVPEDWGLKRG-NADEDFMFLNLGPNHPSAHGAFRIVLQLDGEEVKDCVPDIGYHHRGVEKMAER 258
184157031 180 MQDKAKQDFEQEHLRFVPEDWGLKRG-NADEDFMFLNLGPNHPSAHGAFRIVLQLDGEEVKDCVPDIGYHHRGVEKMAER 258
213156538 180 MQDKAKQDFEQEHLRFVPEDWGLKRG-NADEDFMFLNLGPNHPSAHGAFRIVLQLDGEEVKDCVPDIGYHHRGVEKMAER 258
169634179 180 MQDKAKQDFEQEHLRFVPEDWGLKRG-NADEDFMFLNLGPNHPSAHGAFRIVLQLDGEEVKDCVPDIGYHHRGVEKMAER 258
169797056 180 MQDKAKQDFEQEHLRFVPEDWGLKRG-NADEDFMFLNLGPNHPSAHGAFRIVLQLDGEEVKDCVPDIGYHHRGVEKMAER 258
215484517 180 MQDKAKQDFEQEHLRFVPEDWGLKRG-NADEDFMFLNLGPNHPSAHGAFRIVLQLDGEEVKDCVPDIGYHHRGVEKMAER 258
296112933 167 FLNTAKQEFEQENLRFVPEEWGMKRS-GRDEDFMFLNIGPNHPSAHGAFRLVLQLDGEEIVDCIPDIGYHHRGAEKMAER 245
148653494 180 FLNNAKQQFEQENLRFVPEEWGMKRS-GRDEDFMFLNLGPNHPSAHGAFRLVLQLDGEEVIDCIPDIGYHHRGAEKMAER 258
93005405  176 FLNTAKQQYEQENLRFVPEEWGMKRS-GRDEDFMFLNIGPNHPSAHGAFRLVLQLDGEEVVDCIPDIGYHHRGAEKMAER 254
116515040 241 QTWHSYIPYTDRIEYLGGCVNEMPYILAVEKLAGIVVPEKVQVIRILLSELFRINSHLLFLSTFIQDIGSMSTVFLAFTD 320
162286749 259 QTWHSFIPYTDRVDYLGGCAQNMPYVMAVEQLAGIKVPERAQVIRVMLNELFRINNHLLYCGTAIQDAGGMTPVFYMFAD 338
184157031 259 QTWHSFIPYTDRVDYLGGCAQNMPYVMAVEQLAGIKVPERAQVIRVMLNELFRINNHLLYCGTAIQDAGGMTPVFYMFAD 338
213156538 259 QTWHSFIPYTDRVDYLGGCAQNMPYVMAVEQLAGIKVPERAQVIRVMLNELFRINNHLLYCGTAIQDAGGMTPVFYMFAD 338
169634179 259 QTWHSFIPYTDRVDYLGGCAQNMPYVMAVEQLAGIKVPERAQVIRVMLNELFRINNHLLYCGTAIQDAGGMTPVFYMFAD 338
169797056 259 QTWHSFIPYTDRVDYLGGCAQNMPYVMAVEQLAGIKVPERAQVIRVMLNELFRINNHLLYCGTAIQDAGGMTPVFYMFAD 338
215484517 259 QTWHSFIPYTDRVDYLGGCAQNMPYVMAVEQLAGIKVPERAQVIRVMLNELFRINNHLLYCGTAIQDAGGMTPVFYMFAD 338
296112933 246 QTWHSFIPYTDRIDYLGGVMNELPYIMAVEKLAGITTPERANIIRIMMSEFFRITNNLLYWGTFIQDAGGMTPVFYMFAD 325
148653494 259 QTWHSYIPYTDRIDYLGGVMNELPYVMAVEQLAGITVPERAQTIRVMMSEFFRITNNLLYFGTFIQDAGGMTPVFYMFTD 338
93005405  255 QTWHSFIPYTDRIDYLGGVMNELPYIMSVEKLAGITIPPRAETIRVMMSEFFRITNNLLFVGTFIQDAGGMTPVFYMFTD 334
116515040 321 RQKIYDLIESITGARMHPAWFRIGGVAKDLPKNWNSLLKKFLIWMPKRLDYYVNIAIKNKILISRSKGIAAYGKKEALSW 400
162286749 339 RQKVYDIVEAITGYRMHPAWFRIGGTAHDLPNNWQKLVKELLDWMPKRLNEYYTAAFKNSVFIGRTRNVAQYDAKSALAW 418
184157031 339 RQKVYDIVEAITGYRMHPAWFRIGGTAHDLPNNWQKLVKELLDWMPKRLNEYYTAAFKNSVFIGRTRNVAQYDAKSALAW 418
213156538 339 RQKVYDIVEAITGYRMHPAWFRIGGTAHDLPNNWQKLVKELLDWMPKRLNEYYTAAFKNSVFIGRTRNVAQYDAKSALAW 418
169634179 339 RQKVYDIVEAITGYRMHPAWFRIGGTAHDLPNNWQKLVKELLDWMPKRLNEYYTAAFKNSVFIGRTRNVAQYDAKSALAW 418
169797056 339 RQKVYDIVEAITGYRMHPAWFRIGGTAHDLPNNWQKLVKELLDWMPKRLNEYYTAAFKNSVFIGRTRNVAQYDAKSALAW 418
215484517 339 RQKVYDIVEAITGYRMHPAWFRIGGTAHDLPNNWQKLVKELLDWMPKRLNEYYTAAFKNSVFIGRTRNVAQYDAKSALAW 418
296112933 326 RQKAYDVIEAVTGYRMHPAWFRIGGTAHDLPNGWQRLVREFLDWMPKRIDEYVKATMTNSVLKGRTQNVAQYDAKHALAW 405
148653494 339 RQKAYDVIEAVTGYRMHPAWFRIGGTAADLPRGWQRLVREFLDWMPQRLDEYVKAAMENSVLKGRTQNVAQYDAKQALAW 418
93005405  335 RQKAYDVIEAVTGYRMHPAWFRIGGTAHDLPRGWQRLVREFLDWMPKRLDEYVKAALQNSVLKGRTQGVAQYNTKQALAW 414
116515040 401 GITGAGLRATGVNFDVRKNRPYSGYQNFDFEVPIGNNiSDAYTRVLLKIEEIRQSLKILNQCLLHMPLGSYKSDHPLSTP 480
162286749 419 GVTGTGLRATGIDFDVRKYRPYSGYENFDFEVPVEYE-GDAYARVLVHFREIEQSLKIIKQCLDNMPSGPYKADHPLAVP 497
184157031 419 GVTGTGLRATGIDFDVRKYRPYSGYENFDFEVPVEYE-GDAYARVLVHFREIEQSLKIIKQCLDNMPSGPYKADHPLAVP 497
213156538 419 GVTGTGLRATGIDFDVRKYRPYSGYENFDFEVPVEYE-GDAYARVLVHFREIEQSLKIIKQCLDNMPSGPYKADHPLAVP 497
169634179 419 GVTGTGLRATGIDFDVRKYRPYSGYENFDFEVPVEYE-GDAYARVLVHFREIEQSLKIIKQCLDNMPSGPYKADHPLAVP 497
169797056 419 GVTGTGLRATGIDFDVRKYRPYSGYENFDFEVPVEYE-GDAYARVLVHFREIEQSLKIIKQCLDNMPSGPYKADHPLAVP 497
215484517 419 GVTGTGLRATGIDFDVRKYRPYSGYENFDFEVPVEYE-GDAYARVLVHFREIEQSLKIIKQCLDNMPSGPYKADHPLAVP 497
296112933 406 GVTGAGLRATGIEFDLRKARPYLGYENFEFDVPVFYN-GDAYDRCLVKIEEIRQSLRIIEQCLNNMPSGAYKAEHPLAVP 484
148653494 419 GVTGAGLRATGVEFDLRKARPYMGYENYDFEIPVGYN-GDAYDRCMVKIEEIRQSLRIIRQCMDNMPSGPYKADHPLAVP 497
93005405  415 GVTGAGLRATGLDFDLRKARPYMGYENYDFEVPVGYN-GDAYDRCMVKVEEMRQSLRIIRQCMDNMPQGPYKADHPLAVP 493
116515040 481 QKKNKSLFHIERMITHFLQMSWGPIIPSNESFQMIEATKGINSYYLISDGLTTSYRTRIRTPSFAHLQQIPSVIRGYVIS 560
162286749 498 PPKDKTLQDIETLITHFLSVSWGPVMPAGEASFMTEVVKGASTYYLTSDKATMSYRTRIRTPTFTHLQQIPSVINGSLVS 577
184157031 498 PPKDKTLQDIETLITHFLSVSWGPVMPAGEASFMTEVVKGASTYYLTSDKATMSYRTRIRTPTFTHLQQIPSVINGSLVS 577
213156538 498 PPKDKTLQDIETLITHFLSVSWGPVMPAGEASFMTEVVKGASTYYLTSDKATMSYRTRIRTPTFTHLQQIPSVINGSLVS 577
169634179 498 PPKDKTLQDIETLITHFLSVSWGPVMPAGEASFMTEVVKGASTYYLTSDKATMSYRTRIRTPTFTHLQQIPSVINGSLVS 577
169797056 498 PPKDKTLQDIETLITHFLSVSWGPVMPAGEASFMTEVVKGASTYYLTSDKATMSYRTRIRTPTFTHLQQIPSVINGSLVS 577
215484517 498 PPKDKTLQDIETLITHFLSVSWGPVMPAGEASFMTEVVKGASTYYLTSDKATMSYRTRIRTPTFTHLQQIPSVINGSLVS 577
296112933 485 PPKERTLQDIETLINHFVSVSWGPVMPAGESACMVEGVKGLNSYYVISDKSTMSYRTRIRTPTFAHLQQMPSVINGSLVS 564
148653494 498 PPKNRTLNDIETLINHFISVSWGPVMPAGEASMMVEATKGINSYYITSDRSTMSYRTRIRTPTFAHLQQMPSVINGSLVS 577
93005405  494 PPKDRTLNDIETLINHFISVSWGPVMPAGECTTIVEATKGLNSYYITSDKATMSYRTRIRTPTFAHLQQMPSVINGSLVS 573
116515040 561 DLIVYLGSIDFVMSDVDR 578
162286749 578 DLIIYLATIDVVMADVDR 595
184157031 578 DLIIYLATIDVVMADVDR 595
213156538 578 DLIIYLATIDVVMADVDR 595
169634179 578 DLIIYLATIDVVMADVDR 595
169797056 578 DLIIYLATIDVVMADVDR 595
215484517 578 DLIIYLATIDVVMADVDR 595
296112933 565 DAIIYLASIDIVMADCDR 582
148653494 578 DLIIYLASIDIVMADTDR 595
93005405  574 DAIMYLASIDIVMADCDR 591
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