Conserved Protein Domain Family
PLN00206

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PLN00206: PLN00206 (this model, PSSM-Id:177796 is obsolete and has been replaced by 215103)
DEAD-box ATP-dependent RNA helicase; Provisional
Statistics
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PSSM-Id: 177796
Aligned: 10 rows
Threshold Bit Score: -1
Created: 9-Dec-2010
Updated: 15-Dec-2010
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
168022304   3 AIDGPIPPAEDQAVKQRSSQQRQPEPGEPVCVVCCRYGEYICDATDDDICSLECKAAILAEInSTPQAacdapkperKVV 82 
79295464    1 MNEEGCVPHNSDVVKQKSIDQRAPLSGEPKCVICSRYGEYICDETNDDVCSLECKQALLRRV-DSARV---------FPA 70 
42572227    1 MNEEGCVPHNSDVVKQKSIDQRAPLSGEPKCVICSRYGEYICDETNDDVCSLECKQALLRRV-DSARV---------FPA 70 
224128704   6 VDGLTVSEAAGDDVKKTSRDQREALPGEPICVVCGRYGEYICDQTDSDICSLECKQTLLGRA-ADTHLpvghplpkrLAA 84 
242064428  14 VSSSDNNELEDLPVKERCFEQREALPGEPRCVVCGRYGEYICDQTDDDICSVECKTILLARIaAKTKPavkaakrvnLPL 93 
225451679  14 VELTDDNEGTADGVKERCWDQREALPGEPKCVICGRYGEYICDETDDDICSLECKQTLLCRV-AKSRLpvvlpppkrLPT 92 
255543463   1 MEVACAGSDGASDVKKTSREQREALQGEPKCVLCGRYGEYICDETDDDICSLECKQILLGGV-GKSDIsvgippprrLAA 79 
302796209   1 -------------VKERCVEQRNAGDGEPRCAVCERFGEYICDETGDDVCSLECKKVVVRYKeLTSNS---------HKA 58 
302813501   1 -------------VKERCVEQRNAGDGEPRCAVCGRFGEYICDETGDDVCSLECKKVVVRYKeLTSNS---------HKA 58 
297832726   1 MNEEGCIPHNSDVVKQKSIDQRAPLPGEPKCVICSRYGEYICDETNDDVCSLECKQTLLRRV-DKATV---------FPA 70 
168022304  83 hlsteglQDECIVVTDKGNklpewapdesvsrlSKEQVNALLQGIEVSVKGE--DAP-RPILQFADCKFLPKLQGNLEAA 159
79295464   71 -------TDECFYVRDPGS--------------SSHDAQLLRRKLDIHVQGQgsAVP-PPVLTFTSCGLPPKLLLNLETA 128
42572227   71 -------TDECFYVRDPGS--------------SSHDAQLLRRKLDIHVQGQgsAVP-PPVLTFTSCGLPPKLLLNLETA 128
224128704  85 -------TDECFYVRDSESp------------lTSDQTELLRRKLEIHVKGD--SVP-DPILSFSSCNLPEKLLHNIQTL 142
242064428  94 -------GDESFCIKDINFpni--------ptlADSRISSLRTKLDICVKGD--AVP-DPIMCFSACGLPEKLVHNLETA 155
225451679  93 -------TDECFYVRDSGDksgs-------qslTGSQTEMLRRRLEICVRGD--FDL-SPILSFSSCNLPQKLLQNIEAA 155
255543463  80 -------TDECFYVRENGTss-----------lTNDQTELLRRTLEIHVKGE--LVP-DPILSFSSCNLPQKLLLNLEAA 138
302796209  59 -------RNEQWEIDQESItg----------glSIQDALALRESIGVSVRGEggAPPrPPILDFGQCGFAPRLMENLSSA 121
302813501  59 -------RNEQWEIDQESItg----------glSIQEALALRESIGVSVRGGggAPPpPPILDFGQCGFAPRLMENLSSA 121
297832726  71 -------TDECFYVRDPGS--------------SFPDAQLLRRKLDIHVQGQeaTVP-PPVLTFASCGLPPKLLLNLETA 128
168022304 160 GYETPTPVQMQTIPAALKGRDVLVSAETGSGKTASFLLPIIMRCCLIRIHGLSER----EKPLAMVLAPTRELCAQVEEQ 235
79295464  129 GYDFPTPIQMQAIPAALTGKSLLASADTGSGKTASFLVPIISRCTTYHSEHPSDQr---RNPLAMVLAPTRELCVQVEDQ 205
42572227  129 GYDFPTPIQMQAIPAALTGKSLLASADTGSGKTASFLVPIISRCTTYHSEHPSDQr---RNPLAMVLAPTRELCVQVEDQ 205
224128704 143 GYDMPTPIQMQGIAAALTGKSLLASADTGSGKTASFLVPVVSRCATFRHGNISKS----KKPLAMVLTPTRELCIQVEEQ 218
242064428 156 GYCMPTPVQMQVIPASMSNRSLLVSADTGSGKTASFLIPIIAHCSQVRSQESTSN----QGPLAIVLAPTRELCLQVEEQ 231
225451679 156 GYEIPTPVQMQAIPAALVGKNLLVSADTGSGKTASFLVPIVSRCTSIRPDHSPNQ----KNPLAMVLTPTRELCMQVEEQ 231
255543463 139 GYDLPTPVQMQAIPTALSGKSLLASADTGSGKTASYLVPIISSCASYRLQHSSD-----RKPLAMVLTPTRELCIQVEDQ 213
302796209 122 GYEAPTPIQMQVLPAALAGRDLLVSSHTGSGKTLSFLLPIIARCCKIRRGGPDEDdetsRPPLAMVLTPTRELSSQVEDH 201
302813501 122 GYEAPTPIQMQVLPAALAGRDLLVSSHTGSGKTLSFLLPIIARCCKIRSGGPDEDdetsRPPLAMVLTPTRELSSQVEDH 201
297832726 129 GYDFPTPIQMQAIPAALSGNSLLASADTGSGKTASFLVPIISRCTTYRSEHPSDQ----RNPLAMVLAPTRELCVQIENQ 204
168022304 236 AKVLAKGLPFKTALVVGGDAMPQQVHRIKQGVELIIGTPGRLIDLLSKHdDLTLQGVCILALDEVDCLLESGFRDQVLQL 315
79295464  206 AKMLGKGLPFKTALVVGGDPMSGQLYRIQQGVELIIGTPGRVVDLLSKH-TIELDNIMTFVLDEVDCMLQRGFRDQVMQI 284
42572227  206 AKMLGKGLPFKTALVVGGDPMSGQLYRIQQGVELIIGTPGRVVDLLSKH-TIELDNIMTFVLDEVDCMLQRGFRDQVMQI 284
224128704 219 AKLLGKGLPFKTALVIGGDAMPRQLYRIQQGVELIVGTPGRLIDLLAKH-DIELDDIMILVLDEVDCMLQQGFRDQVMQI 297
242064428 232 AKVLGKGLPFKTALVVGGDPLPQQIYRIENGIELIVGTPGRLIDLLMKH-NVDLTYVSVFVLDEVDCLLERGFRDQAMQI 310
225451679 232 AKLLGKGLPFKTALVVGGDAMPRQLHRIQQGVELIVGTPGRLIDLLSKH-EIELDDVFMLVLDEVDCMLERGFRDQVMQI 310
255543463 214 AKLFGKGLPFKTALVVGGDAMAGQLYRIQQGVELIVGTPGRLIDLLTKH-DIELDNMIIFVIDEVDCMLQRGFRDQVMQI 292
302796209 202 AKILAKGLPFKTALVVGGDVMPQQVYRIRKGVELIVGTPGRLLDVLSRHeDVNLAKVSVLVLDEVDCMLERGFREQVMQI 281
302813501 202 AKILAKGLPFKTALVVGGDVMPQQAYRIRKGVELIVGTPGRLLDVLSRHeDVNLAKVSVLVLDEVDCMLERGFREQVMQI 281
297832726 205 AKVLGKGLPFKTALVVGGDPMSGQLYRIQQGVELIIGTPGRVVDLLVKH-AIELDNIMTFVLDEVDCMLQRGFRDLVMQI 283
168022304 316 VQALAMPQILMYSATILPAIERFSSSLLKNPLIISVGTPRQPNRAVHQIILWVETKNKKKKLFEILKSRVHYRPPVVVFV 395
79295464  285 FQALSQPQVLLFSATISREVEKVGGSLAKEIILVSIGNPNKPNKAVNQLAIWVDAKQKKQKLFDILRSQNHFKPPAVVYV 364
42572227  285 FQALSQPQVLLFSATISREVEKVGGSLAKEIILVSIGNPNKPNKAVNQLAIWVDAKQKKQKLFDILRSQNHFKPPAVVYV 364
224128704 298 FRALSQPQVLMYSATMSQEVEKMASSMAKDLIFVSIGQPNRPSKAVKQLAIWVESKQKKQKLFDILMSKQHFLPPSIVYV 377
242064428 311 FQSLSQPQVMMFSATLHSEVEKMSNSLAKNVISISCGNPNRPTKSVKQVVIWVESKKKKQKIFEIMKSKQHFKPPAVVFV 390
225451679 311 YRALSQPQVLMYSATISQEVEKVASSMAKDIIVISVGKSNRPNIAVKQLAIWVESKQKKQKLFDILTSKQHFTPPVVVFV 390
255543463 293 FWALSQPQVLLYSATVTQEVEKMASSMAKDMALVSIGQPNRPSKAVKQLAIWVEPKQKKQKLFDILMSKQHFMPPAVVYV 372
302796209 282 VRALPTPQMMLFSATVPPEIEKFATSIAKSLMVISAGPPGAPTGAVQQTVVWVETKNKKKKLFDILQSSSRFQPPGVVFV 361
302813501 282 VRALPTPQVMLFSATVPPEIEKFATSIAKSLMVISAGPPGAPTGAVQQTVVWVETKNKKKKLFDFLQSSSRFQPPGVVFV 361
297832726 284 FQALSQPQVLLFSATVSREVEKVGGSLAKEIILVSIGNPNKPNKAVNQLAIWVDAKQKKQKLFDILRSQNHFKPPAVVYV 363
168022304 396 NSRMGSDLLAEAIRTVTGIQARSLHGEKSIKDRRETLKNFLMGEIPVIVATGVLGRGLDLLRVTQVIIFDFPSSIEEYIH 475
79295464  365 SSRVGADLLANAITVVTGVKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGVLGRGVDLLVVRQVIVFDMPSTIKEYIH 444
42572227  365 SSRVGADLLANAITVVTGVKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGVLGRGVDLLVVRQVIVFDMPSTIKEYIH 444
224128704 378 GSRIGADLLSNAITVTTGLKALSIHGEKSMKERREIMKSFLVGEVPLVVATGVLGRGVDLLGVRQVIVFDMPNCIKEYVH 457
242064428 391 SSRVGADLLSEAITVATGLEVVSIHGEKTMKERRENLRRFLTGEVSVVVSTGVLGRGMDLLKVRQVILFDIPNSIDEYIH 470
225451679 391 GSRLGADLLTEAITITTGLKALSIHGEKSMKERREIMSSFLVGEVPVMVATGVLSRGVDLLSVRQVIVFDMPNSIKEYVH 470
255543463 373 GSRLGADLLSNAITVTTGWKSLSIHGEKSMKERREIMKSFLVGEVTVIVATGVLGRGVDLFGVRQVIIFDMPNSIKEYIH 452
302796209 362 NSRLGAELLGDAISKVTKLRCASLHGHKAMKERREVLKSFLVGSLDVIVATGVLGRGLDLLRATQVIIFDMPNTVQEYTH 441
302813501 362 NSRLGAELLADAISKVTKLRCASLHGHKAMKERREVLKSFLVGSLDVIVATGVLGRGLDLLRATQVIIFDMPNTVQEYTH 441
297832726 364 SSRVGADLLANAITVVTGVKALSIHGEKPMKERRDVMGSFLGGDVPVLVSTGVLGRGVDLLVVRQVIVFDMPSTIKEYIH 443
168022304 476 MIGRASRLSNAGSAMVFVNDESKALFKELVALLKASRTVVPRELLNspyllstyaLAYNRKKKRRRKDVD 545
79295464  445 VIGRASRMGEKGTAIVFVNEDDRNLFPDLVAALKSSGAAIPKELIN---------LTSREMHNKKRRVGY 505
42572227  445 VIGRASRMGEKGTAIVFVNEDDRNLFPDLVAALKSSGAAIPKELIN---------LTSREMHNKKRRVGY 505
224128704 458 QIGRASRMGEDGTSIVFVNEENRNLFPDLVEVLKSSGAVIPRELVNsryvkrsfpMGKGQ---RKRKYGS 524
242064428 471 QVGRASRMGEEGMAVVFVNEEDRRIFKELVQVLKTAGAPIPRELANsryt-agvyVGSERKRKLSSRYRS 539
225451679 471 QIGRASRLGEEGTAILFLNEENRNLFPELVEILKSSGAAIPRELANsryrlgsvnVGRGQIRQKKRKHGH 540
255543463 453 QIGRASRMGEGGIAIVFVNEENKNLFPEFIEVLKSSAAVIPRELANsr-----ysVGKGQ---KKRKYGS 514
302796209 442 QLGRASRLDEPGTAIAFINNESKALFQQLAQLSRSAGVALPKPV-----------TSYVRDTNPRKRKAR 500
302813501 442 QLGRASRLDEPGTAIAFINNESKALFQQLAQLSRSAGVALPKPV-----------TSYVRPRKRKAR--- 497
297832726 444 VIGRASRMGEKGTAILFVNEEDRNLFPDLVAALKSSGAAIPKELIN---------LTSKEMHNKKRRVGY 504
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