3FIK


Conserved Protein Domain Family
L17
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TIGR00059: L17 (this model, PSSM-Id:129169 is obsolete and has been replaced by 272880)
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ribosomal protein L17
Eubacterial and mitochondrial. The mitochondrial form, from yeast, contains an additional 110 amino acids C-terminal to the region found by this model [Protein synthesis, Ribosomal proteins: synthesis and modification].
Links
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Statistics
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PSSM-Id: 129169
Aligned: 10 rows
Threshold Bit Score: 141.417
Created: 11-Sep-2012
Updated: 16-Jan-2013
Structure
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Program:
Drawing:
Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
3FIK_N      6 SG-RQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAK----TDSVANRRLAFARTRDNEI----- 75  Escherichia coli
P02416      6 SG-RQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAK----TDSVANRRLAFARTRDNEI----- 75  Escherichia coli
P44355      6 SG-RQLNRNSSHRQAMFRNLASALVSHEIIKTTLPKAKELRRVVEPLITLAK----VDSVANRRLAFARTRNVET----- 75  Haemophilus influe...
P73296      6 RV-PQLGKPADQRKALLRALTTELIRHGQIKTTKARAKAVRSEVDRMITLAK----DGSLAARRRALGYMYDKPT----- 75  Synechocystis sp. ...
P56042      6 GY-RKLGRTSSHRKALLKNLAIALIEHNKIETGIYKAKELRSYIEKLTTAAR----VGDFNAHRHVFAYLQNKEA----- 75  Helicobacter pylor...
O51456      6 GF-NRLSRKSSHRRALLKNMVISFFKHEKISSTKTKLFEVKRFAERLITRAK----VDTVHNRRELSKFIHDKHI----- 75  Borrelia burgdorfe...
P47424      2 SYiNKEGKTTAWRVMTVRQQVSAVLSYGKIQTTLKKAKNTQKRLEKIITIAK----VDNFNNRRAVKKWLLNTNSldv-- 75  Mycoplasma genital...
Q59547      2 SYiNKPGKTSAWRVMTVRQQVSAVLAYGKIETTLKKAKNTQKRLDKLITLAK----VDNFNNRRQVKKWLLNTNLfdv-- 75  Mycoplasma pneumon...
NP_388025   2 SY-RKLGRTSAQRKAMLRDLTTDLIINERIETTETRAKELRSVVEKMITLGK----RGDLHARRQAAAYIRNEVAneenn 76  Bacillus subtilis ...
P22353      4 GIaRKLSRDKAHRDALLKNLACQLFQHESIVSTHAKCKEASRVAERIITWTKraitTSNSVAQAELKSQIQSQLFlagdn 83  Saccharomyces cere...

3FIK_N     76 ---VAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVD 117 Escherichia coli
P02416     76 ---VAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVD 117 Escherichia coli
P44355     76 ---VAKLFNELGPRFAQRAGGYTRILKCGFRAGDNAPMAYIELVD 117 Haemophilus influenzae Rd KW20
P73296     76 ---VHALFADAPSRYKDRDGGYTRIIRTLRRRGDNAEMAVIELV- 116 Synechocystis sp. PCC 6803 substr. Kazusa
P56042     76 ---THKLVTEIAPKYAQRNGGYTRIQRTTFRRGDASTLATIEFV- 116 Helicobacter pylori 26695
O51456     76 ---LNKLFTKISPVFRQRSGGYTRMIKLGKRYGDAAEMAILELVE 117 Borrelia burgdorferi B31
P47424     76 dqlTNHLFKKVAPRFLKRNGGYSRVLKLGVRRGDSTEMAILQLID 120 Mycoplasma genitalium G37
Q59547     76 dqlMDHLFSKVAPKYEKTPGGYSRVLKLGPRRGDATEMAILQLTD 120 Mycoplasma pneumoniae M129
NP_388025  77 qdaLQKLFSDIATRYEERQGGYTRIMKLGPRRGDGAPMAIIELV- 120 Bacillus subtilis subsp. subtilis str. 168
P22353     84 rklMKRLFSEIAPRYLERPGGYTRVLRLEPRANDSAPQSVLELVD 128 Saccharomyces cerevisiae S288c
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