Conserved Protein Domain Family
Aa_trans

?
pfam01490: Aa_trans, with user query added  
Transmembrane amino acid transporter protein
This transmembrane region is found in many amino acid transporters including UNC-47 and MTR. UNC-47 encodes a vesicular amino butyric acid (GABA) transporter, (VGAT). UNC-47 is predicted to have 10 transmembrane domains. MTR is a N system amino acid transporter system protein involved in methyltryptophan resistance. Other members of this family include proline transporters and amino acid permeases.
Statistics
?
PSSM-Id: 279788
Aligned: 25 rows
Threshold Bit Score: 271.872
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:

query       2 LVETSMIGLMLGSCITFYVVIGDLGSNFFAP.[10].RVFLLFAVSLFIVLPLS     LQRNMMA     SIQS      70  
P40501     85 IFDLAMIVQCFGVGLSYLVLIGDLFPGLFGG      ERNYWIIASAVIIIPLC     LVKKLDQ.[1].KYSS.[1]. 145  Saccharomyces cerevisi...
P38176     83 VFDFAIAVKCFGVGVSYLIIVGDLVPQIVQS.[20].RRLYITLIIVFVISPLC     FKRSLNS.[1].RYAS.[1]. 163  Saccharomyces cerevisi...
P34479    132 FVNVTILFYQLGMCSVAILFISDNLVNLVGD.[ 7].QQMILMATVSLFFILLT.[1].MFTEMRI.[1].SFFA.[1]. 200  Caenorhabditis elegans
EFH59013  116 LTEFLIFTAQCGGSVAYLVFIGRNLSSIFSS.[ 3].SMVSFILILVPIEVGLS     WITSLSA.[1].SPFS.[1]. 179 
Q10074    352 AILASIVVSQIGFSSAYISFVASTLQACVKV.[ 8].HLAVFIFIQFLVFVPLS     LVRKISK.[1].SATA.[1]. 420  Schizosaccharomyces po...
P34579    168 WVLAAQLTELLSTCIIYLVLAADLLQSCFPS.[ 1].DKAGWMMITSASLLTCS     FLDDLQI.[1].SRLS.[1]. 229  Caenorhabditis elegans
P92961    115 LTWGLQYVNLFMINCGFIILAGSALKAVYVL.[ 7].KLPHFIAIAGLICAIFA.[1].GIPHLSA.[1].GVWL.[1]. 183  thale cress
Q42400    123 LCGVAQYGNLIGVTVGYTITASISLVAVGKS.[14].SNYPYMAVFGIIQVILS     QIPNFHK.[1].SFLS.[1]. 197  thale cress

query      71 FSAMAL.[ 5].FMFVIVLSSLKHGLFSGQWL.[5].IR.[2].GVFRCVPIFGMSFA.[1].QSQVLPTYDSLDE 138 
P40501    146 LGLFAL.[ 6].VFSHFVFELGKGELTNILRN.[7].HD.[2].GLLSTFSIIIFAFT.[1].SMNLFPMINELKD 216  Saccharomyces cerevisiae S...
P38176    164 IAIVSV.[ 4].GLIIYHFVNRHQLERGQVYF.[6].SQ.[2].SPLTTLPIFVFAYT.[1].HHNMFSVINEQVD 231  Saccharomyces cerevisiae S...
P34479    201 VSSVFF.[ 1].IGAAVIMQYTVQQPNQWDKL.[5].FT     GTITMIGMSMYAFE.[1].QTMILPIENKLDN 262  Caenorhabditis elegans
EFH59013  180 FADICN.[ 5].FVVKENVEMVIEGDFSFSDR.[4].ST.[2].GLPFAGGVAVFCFE.[1].FAMTLALENSMRD 246 
Q10074    421 IADVFI.[ 3].ILYLYFWDVITLATKGIADV.[2].FN.[2].DFSLFIGVAIFTYE.[1].ICLILPIQEQMAK 483  Schizosaccharomyces pombe ...
P34579    230 FNAISH.[ 3].NLIMVLYCLSFVSQWSFSTI.[5].IN     TLPTIVGMVVFGYT.[1].HIFLPNLEGNMKN 293  Caenorhabditis elegans
P92961    184 VSTFLS.[ 6].AIVLSVRDGVKTPSRDYEIQ.[4].SK.[2].TITGAAANLVFAFN     TGMLPEIQATVRQ 250  thale cress
Q42400    198 MAAVMS.[13].TVAGGKVGKTSMTGTAVGVD.[4].QK.[2].RSFQAVGDIAFAYA.[1].ATVLIEIQDTLRS 272  thale cress

query     139 .[1].SV.[5].IFASSLNVVTAFYVMVGFFGYVSFTDATTGNVLIHFP.[3].VTEMIRVGFVMSVAVGFPMMILPCRQ 212 
P40501    217 .[1].SM.[5].VINNSISLSTALFLIVGLSGYLTFGNETLGNLMLNYD.[4].WIVIGKFCLGSMLILSFPLLFHPLRI 291  Saccharomyces cerevisi...
P38176    232      KS.[6].IPIFAIVLAYFLYIIIGGTGYMTFGENIVGNILTLYP.[3].STTIGRLAMLLLVMLAFPLQCHPCRS 305  Saccharomyces cerevisi...
P34479    263 .[1].AA.[6].VLSTTMIICTAFMTALGFFGYTGFGDSIAPTITTNVP.[3].LYSTVNVFLMLQSLLGNSIAMYVVYD 337  Caenorhabditis elegans
EFH59013  247 .[1].EA.[3].LLAKVLAGITFVYVLFGFCGYMAYGDQTKDIITLNLP.[3].SAIAVQIGLCVGLTFTFPIMVHPLNE 318 
Q10074    484 .[1].KN.[3].LLTGVMAAISLLFISIGLLSYAAFGSKVKTVVILNMP.[3].FTVIIQFLYAIAILLSTPLQLFPAIA 555  Schizosaccharomyces po...
P34579    294 .[1].AQ.[3].MLKWSHIAAAVFKVVFGMLGFLTFGELTQEEISNSLP.[3].FKILVNLILVVKALLSYPLPFYAAVQ 365  Caenorhabditis elegans
P92961    251 .[1].VV.[5].ALYFQFTAGVLPMYAVTFIGYWAYGSSTSTYLLNSVN.[4].VKALANVSAILQSVISLHIFASPTYE 325  thale cress
Q42400    273 .[2].AE.[6].ASLVGVSTTTFFYILCGCIGYAAFGNNAPGDFLTDFG.[6].LIDFANACIAVHLIGAYQVFAQPIFQ 351  thale cress

query     213 ALNTLL.[15].MPP     LR     FKVLTLSVVFGTMVGG     VMIPNVETILGFTGATMGSLICFICPALIYKK 286 
P40501    292 AVNNVI.[86].HHA.[4].SR     FYWITALLLISMYTLA     LSVQSFALVLSFVGATGSTSISFTLPGLLGYK 440  Saccharomyces cerevisi...
P38176    306 SVKNII.[38].EEP.[4].ES.[3].INIITLCILLFSYLLA     ISITSLAKVLAIVGATGSTSISFILPGLFGYK 409  Saccharomyces cerevisi...
P34479    338 MFFNGF.[ 7].FPN.[4].LS     DKGFRVFWVLVTYLMA     VLIPKLEIMIPLVGVTSGALCALIFPPFFEMI 407  Caenorhabditis elegans
EFH59013  319 IIEQKL.[15].ETG.[4].CA     IFMTRTLLVVGLAAIA     SLVPGFGTFASLVGSTLCALISFVLPASYHLT 396 
Q10074    556 IIEQGI.[ 5].KRN.[4].WR     KNYLRVLIVILAILIS.[1].AGSSRLDLFVSMVGSVCCIPLIYMYPPMLHYK 624  Schizosaccharomyces po...
P34579    366 LLKNNL.[13].SPD.[4].EW     AVTLRIILVLFTLFVA     LSVPYLVELMGLVGNITGTMLSFIWPALFHLY 441  Caenorhabditis elegans
P92961    326 YMDTKY.[ 5].PFA.[4].LF     RIMARGGYIAVSTLIS     ALLPFLGDFMSLTGAVSTFPLTFILANHMYYK 393  thale cress
Q42400    352 FVEKKC.[20].LGK.[4].LF     RLVWRTAYVVITTVVA     MIFPFFNAILGLIGAASFWPLTVYFPVEMHIA 434  thale cress

query     287 AHKNA.[7].W 299 
P40501    441 LIGLD.[7].I 453  Saccharomyces cerevisiae S288C
P38176    410 LIGSE.[7].V 422  Saccharomyces cerevisiae S288C
P34479    408 TFWTD.[7].R 420  Caenorhabditis elegans
EFH59013  397 LLGPS.[7].V 409 
Q10074    625 ACANN     W 630  Schizosaccharomyces pombe 972h-
P34579    442 IKEKT.[7].F 454  Caenorhabditis elegans
P92961    394 AKNNK.[7].W 406  thale cress
Q42400    435 QTKIK.[7].A 447  thale cress
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap