1KTH,1KNT


Conserved Protein Domain Family
Kunitz_collagen_alpha3_VI

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cd22629: Kunitz_collagen_alpha3_VI 
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Kunitz-type domain from the alpha3 chain of human type VI collagen, and similar proteins
This model includes the Kunitz-type domain from the alpha3 chain of type VI collagen (collagen alpha 3(VI) chain), encoded by COL6A3 gene. Collagen VI is a widely expressed member of the triple helix-containing protein superfamily of collagens and forms beaded microfibrils that anchor large interstitial structures. Immediately after fibril formation, the Kunitz domain can be cleaved off. Mutations in the alpha1, alpha2, and alpha3 chains of collagen VI cause myopathies ranging from the severe Ullrich congenital muscular dystrophy to the milder Bethlem myopathy, including intermediate forms. Early onset isolated dystonia, a neurological disease, has been shown to be caused by mutations in the alpha3 chain. Findings also indicated potential associations between COL6A3 polymorphisms and lung cancer risk. This domain is similar to that of Kunitz-type proteinase inhibitors such as BPTI (bovine pancreatic trypsin inhibitor), showing an alpha/beta fold with irregular secondary structure stabilized by three disulfide bonds.
Statistics
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PSSM-Id: 438672
Aligned: 16 rows
Threshold Bit Score: 106.3
Created: 8-Jul-2020
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:

1KTH_A           3 DICKLPKDEGTCRDFILKWYYDP.[1].TKSCARFWYGGCGGNENKFGSQKECEKVC 55    human
P15989        3070 DICLLQKEEGTCRDFVLKWHYDL.[1].TKSCARFWYGGCGGNENRFNTQKECEKAC 3122  chicken
XP_014344742  3076 DRCQLQKEEGLCRNFIVKWYYDA.[1].KNSCTRFWYGGCGGNSNRFNTQDECEKTC 3128  coelacanth
XP_018093251  3046 QVCNLHKEEGTCRDFVLKWYYDT.[1].TKSCTRFWYGGCGGNENRFSTQNECEKTC 3098  African clawed frog
XP_021334593 10829 DICKLPKEEGSCAKFVLKWHYDP.[1].SGNCTRFWYGGCGGNQNRFDTQDECEKAC 10881 zebrafish
XP_023577844  3210 DICKLPKDEGTCKDYVLKWYFDV.[1].KDGCSRFWYRGCGGNENNFHSQEECEKVC 3262  degu
XP_009931053  3070 EICLLQKDKGPCEDFVLKWHYDP.[1].TKSCARFWHSGCGGNENRFDTKTDCEKVC 3122  Opisthocomus hoazin
XP_029414784  3189 DICKLPKEVGTCDGYKLFWYYDS.[1].AQSCMRFWYGGCGGNENRFKSQEECKKVC 3241  Upper Galilee mountains blind mole rat
XP_010003753  2821 EVCWLQKDEGPCRKFVLQWHHDP.[1].TRRCARFWYGGCGGNGNRFPSQKECERLC 2873  chimney swift
KPP76108       477 ASCSLPADAGSCKTYAIRWYFDL.[1].KNKCARFWYSGCGGNANRFDSQKKCEAAC 529   Asian bonytongue
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