6HAR,1BRC,1AAP,3L3T,5C67,6GFI,6GFI


Conserved Protein Domain Family
Kunitz_ABPP-like

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cd22607: Kunitz_ABPP-like 
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Kunitz domain found in the amyloid-beta precursor protein (ABPP) subfamily
This subfamily includes the amyloid-beta precursor protein (ABPP, also called APP, APPI, Alzheimer disease amyloid protein, amyloid-beta A4 protein, cerebral vascular amyloid peptide (CVAP), protease nexin II (PN2)), as well as amyloid-like protein 2 (APLP2, also called amyloid protein homolog or APPH), among others. ABPP/APPI is an inhibitor of serine proteases such as anionic and cationic trypsins. For example, APPI-4M is a variant that specifically inhibits Kallikrein (KLK)-related peptidase 6 (KLK6), which is highly upregulated in several types of cancer where its increased activity promotes cancer invasion and metastasis. Amyloid-like protein 2 (APLP2) inhibits trypsin, chymotrypsin, plasmin, factor XIA, and plasma and glandular kallikrein, and may play a role in the regulation of hemostasis. Proteins in this subfamily contain a single Kunitz domain, with a structure similar to those of other Kunitz-type proteinase inhibitors such as BPTI (bovine pancreatic trypsin inhibitor), showing an alpha/beta fold with irregular secondary structure stabilized by three disulfide bonds.
Statistics
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PSSM-Id: 438650
Aligned: 20 rows
Threshold Bit Score: 89.0216
Created: 8-Jul-2020
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
 
serine protease
Conserved site includes 12 residues -Click on image for an interactive view with Cn3D
Feature 1:serine protease binding site [polypeptide binding site]
Evidence:
  • Structure:6HAR: Human amyloid-beta A4 protein binds mesotrypsin; contacts at 4A
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  • Structure:1BRC: amyloid beta-protein precursor inhibitor (APPI) binds trypsin; contacts at 4.0A
    View structure with Cn3D
  • Citation:PMID 7683059
  • Structure:6GFI: Homo sapiens amyloid beta-protein precursor inhibitor (APPI) binds mesotrypsin; contacts at 4.0A
    View structure with Cn3D

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:

Feature 1               #########                  # # #                 
6HAR_E        14 VCSEQAETGPCRACFSRWYFDV.[1].EGKCAPFCYGGCGGNRNNFDTEEYCMAVC 65  human
Q06481       309 VCSQEAMTGPCRAVMPRWYFDL.[1].KGKCVRFIYGGCGGNRNNFESEDYCMAVC 360 human
O93279       289 VCWAQAESGPCRAMLERWYFNP.[1].KRRCVPFLFGGCGGNRNNFESEEYCLAVC 340 torafugu
NP_571639    292 VCFASAETGPCRAMLSRWYYVR.[1].ERRCAPFIYGGCGGNRNNFESEEYCLSVC 343 zebrafish
NP_001116484 314 VCSLEAETGPCRASMPRWHFDM.[1].QRKCVRFIYGGCAGNRNNFDSEEYCMVVC 365 zebrafish
NP_001006317 299 VCSQEAMTGPCRAVMPRWYFDS.[1].KRKCIRFIYGGCGGNRNNFESEEYCMAVC 350 chicken
NP_001238753 290 VCSQEAVTGPCRAMMPRWYFDL.[1].QKKCVRFIYGGCGGNRNNFESADYCMAVC 341 African clawed frog
XP_006011468 181 VCSEQAETGPCRAMIPRWYFEA.[1].EGKCVQFIYRGCGGNRNNFENEEYCMAVC 232 coelacanth
XP_007894203 281 VCSQEAMTGPCRAMIPRWYFNA.[1].KKKCVRFIYGGCGGNRNNFDSEEYCMAVC 332 elephant shark
XP_007901748 246 VCSEQAETGPCRAMIPRWYFDI.[1].EGKCAQFIYGGCGGNRNNFDSEEYCLSVC 297 elephant shark

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