3S95


Conserved Protein Domain Family
STKc_LIMK1

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cd14221: STKc_LIMK1 
Click on image for an interactive view with Cn3D
Catalytic domain of the Serine/Threonine Kinase, LIM domain kinase 1
STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. LIMK1 activation is induced by bone morphogenic protein, vascular endothelial growth factor, and thrombin. It plays roles in microtubule disassembly and cell cycle progression, and is critical in the regulation of neurite outgrowth. LIMK1 knockout mice show abnormalities in dendritic spine morphology and synaptic function. LIMK1 is one of the genes deleted in patients with Williams Syndrome, which is characterized by distinct craniofacial features, cardiovascular problems, as well as behavioral and neurological abnormalities. LIMKs phosphorylate and inactivate cofilin, an actin depolymerizing factor, to induce the reorganization of the actin cytoskeleton. They act downstream of Rho GTPases and are expressed ubiquitously. As regulators of actin dynamics, they contribute to diverse cellular functions such as cell motility, morphogenesis, differentiation, apoptosis, meiosis, mitosis, and neurite extension. LIMKs contain the LIM (two repeats), PDZ, and catalytic kinase domains. The LIMK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.
Statistics
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PSSM-Id: 271123
Aligned: 5 rows
Threshold Bit Score: 541.469
Created: 9-Aug-2010
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 28 residues -Click on image for an interactive view with Cn3D
Feature 1:active site [active site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:

Feature 1        #####   #            # #                  #                #               ####
3S95_A        18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQ.[2].FLKEVKVMRCL.[1].HPNVLKFIGVLYKDKRLNFITEYI 89  human
Q8QFP8       352 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQ.[2].FLKEVKVMRCL.[1].HPNVLKFIGVLYKEKRLNFITEYI 423 chicken
O42565       320 LGRGCFGQAIKVTHRVTGEVMVMKELIRFDEETQ.[2].FLKEVKVMRCL.[1].HPHVLKFIGVLYKDKRLNFITEYI 391 African clawed frog
NP_001036156 349 LGTGCFGQAIKVTHRETGEVMVMKELIRFDEETQ.[2].FLKEVKVMRCL.[1].HPNVLKFIGVLYKDKRLNFIAEYI 420 zebrafish
P53667       345 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQ.[2].FLKEVKVMRCL.[1].HPNVLKFIGVLYKDKRLNFITEYI 416 human

Feature 1              ## #                                        # # ## #          #  #        
3S95_A        90 .[1].GGTLRGIIKSMD.[2].YPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEK 162 human
Q8QFP8       424 .[1].GGTLRGLIKSMD.[2].YPWSQRVSFAKDIAAGMAYLHSMNIIHRDLNSHNCLVRENKSVVVADFGLARLMVDEK 496 chicken
O42565       392 .[1].GGTLRRVIKSMD.[2].CPWNQRVSFARDIAAGMTYLHSMNIIHRDLNSHNCLVREDGGLVVANFGLSRLIPEET 464 African clawed frog
NP_001036156 421 .[1].GGTLRDIIKNMD.[2].YPWGQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKSVVVADFGLSRLMVEDR 493 zebrafish
P53667       417 .[1].GGTLRGIIKSMD.[2].YPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEK 489 human

Feature 1                           ####                                                         
3S95_A       163 .[7].SLKKPDRKKRYTVVGNPYWMAPEMINGR.[1].YDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFL 240 human
Q8QFP8       497 .[7].NLKKPDRKKRYTVVGNPYWMAPEMINGR.[1].YDEKVDIFSFGIVLCEIIGRVSADPDYLPRTTDFGLNVRGFL 574 chicken
O42565       465      RDLRKDRRKRYTVVGNPYWMAPEMINGR.[1].YDESVDVFSFGIVICEIIGLVNADPDYLPRTMDFGLNVRAFL 535 African clawed frog
NP_001036156 494 .[2].ERRKADRRKRYTVVGNPYWMAPEMIHGK.[1].YDEKVDLFSFGIMLCEIIGRVNADPDYLPRALDFGLNTAVFL 566 zebrafish
P53667       490 .[7].SLKKPDRKKRYTVVGNPYWMAPEMINGR.[1].YDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFL 567 human

Feature 1                                                           
3S95_A       241 DRYCP.[2].CPPSFFPITVRCCDLDPEKRPSF.[1].KLEHWLETLRMHL 284 human
Q8QFP8       575 ERYCP.[2].CPPSFFPIAACCCDLDPEKRPSF.[1].KLEQWLETLRMHL 618 chicken
O42565       536 DRFCP.[2].CPPGFFPSAVLCCDLDPEKRPRF.[1].QLQLWLDSLLRHL 579 African clawed frog
NP_001036156 567 EEHCP.[2].CPAAFFPIAALCCDLDAEKRPAF.[1].KLESWLEDLKMHL 610 zebrafish
P53667       568 DRYCP.[2].CPPSFFPITVRCCDLDPEKRPSF.[1].KLEHWLETLRMHL 611 human

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