1ZFJ,1O50,1PBJ,1PVM,1VR9,1Y5H,1YAV,2D4Z,2EF7,2O16,2OOX,2OOX,2P9M,2RC3,2RIF,2V8Q,2V8Q,2YVX,2YZI,2YZQ,2YZQ,3DDJ,3DDJ,3FNA,3FV6,3GBY,3KH5,3KH5,3KPC,3KXR,3L2B,3LV9,3PC2,4GQV,4NOC,5G5R,5IIP


Conserved Protein Domain Family
CBS_pair_SF

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cd02205: CBS_pair_SF 
Click on image for an interactive view with Cn3D
Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains superfamily
The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members), Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase), retinitis pigmentosa (IMP dehydrogenase-1), and homocystinuria (cystathionine beta-synthase).
Statistics
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PSSM-Id: 341358
Aligned: 151 rows
Threshold Bit Score: 47.2392
Created: 12-Dec-2003
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 41 residues -Click on image for an interactive view with Cn3D
Feature 1:CBS repeat [structural motif]
Evidence:
  • None

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:

Feature 1     #########      #########     ######     ######     ######      #####         
1ZFJ_A     97 IIDPFFLTP.[2].KVSEAEELXQ.[5].GVPIVE.[5].KLVGII.[2].RDXRFI.[ 6].ISEHX.[5].VTAA 167 Streptococcus pyogenes
1YAV_B     23 ADKVAHVQV.[2].NLEHALLVLT.[5].AIPVLD.[3].RLHGLI.[2].NMIMNS.[16].VEEVM.[4].PRLH 100 Bacillus subtilis
3KXR_A     61 DHQXLVLSD.[2].TVAQAQRFFR.[8].NLFIVD.[3].KYLGTV.[2].YDIFKH.[ 5].LISLL.[4].RALT 130 Shewanella oneidensis MR-1
3PC2_A    392 PAPPVILKS.[2].TVGEAIALMK.[5].QLPVVD.[4].SVLGVV.[2].ETLITQ.[11].AIKAL.[4].IRLN 465 fruit fly
NP_233204 142 DRKVYTLPF.[2].SVRRAKVLLD.[8].YIYLIN.[3].KFRGLV.[2].SDVLQA.[ 5].LKNLR.[4].VTLN 211 Vibrio cholerae O1 biovar ...
NP_350255  10 KNEVIYEKI.[2].TMRQALERME.[5].AIPILD.[3].KYIGTL.[2].GDLLWK.[18].DIPRH.[4].PVHI 89  Clostridium acetobutylicum...
NP_464081  10 KINLTTVPG.[2].TLQEAIHLLE.[5].CVPVLD.[4].KFLGNI.[2].MHIYKH.[10].VMSLI.[4].KHIC 82  Listeria monocytogenes EGD-e
NP_844462  10 KREVLFCSS.[2].TIAEALEHLN.[5].CVPVLD.[4].KYLGNI.[2].VDILEY.[ 7].VLQLL.[4].GYVR 79  Bacillus anthracis str. Ames
AAS78507  281 RRRPVSLIR.[5].GPRSALKLLQ.[5].YGYVLE.[3].KFIGVV.[2].DSLKKA.[ 6].LDSAL.[4].APVP 351 Yersinia enterocolitica
YP_207005  81 DRKIATLPF.[2].SVGRAKKLLK.[8].YMHLIN.[3].KFHGIV.[2].TDILTA.[ 5].INTLK.[4].LVLN 150 Vibrio fischeri ES114

Feature 1                                                         
1ZFJ_A    168 .[2].TDLETAERILH.[2].RIEKLPLVD.[3].RLSGLIT.[1].KDIEK 207 Streptococcus pyogenes
1YAV_B    101 .[2].DPIMKGFGMVI     NNGFVCVEN.[3].VFEGIFT.[1].RVVLK 138 Bacillus subtilis
3KXR_A    131 .[2].TTLLDAAEAIE.[2].REIELPVID.[3].ELIGRVT.[1].RAATA 170 Shewanella oneidensis MR-1
3PC2_A    466 .[2].EILGKLARVLE     VDPSVLILG.[7].ELKALAT.[1].LDVTT 507 fruit fly
NP_233204 212 .[2].QTLSDAVDALE.[2].TLPIVPVLS.[3].TLIGEID.[1].HFALS 251 Vibrio cholerae O1 biovar eltor str. N16961
NP_350255  90 .[1].SDIEDLISKSV     SQNFVPVVD.[3].VFIGIIK.[1].SDIMN 126 Clostridium acetobutylicum ATCC 824
NP_464081  83 .[2].ASFFEVFFTIK     ELPYIAVLN.[3].NFYGILT.[1].GKLLG 120 Listeria monocytogenes EGD-e
NP_844462  80 .[2].SSFFKVFFTIK     KLPYLSVVD.[3].AFLGILT.[1].KKVFE 117 Bacillus anthracis str. Ames
AAS78507  352 .[2].MPLSELISLVA.[1].APCAVPVVG.[3].SYIGIIS.[1].AMLLQ 390 Yersinia enterocolitica
YP_207005 151 .[2].QPLSESIEAIE.[2].AVPSVAIVD.[3].TLIGQLD.[1].QFAIN 190 Vibrio fischeri ES114

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