1SKY,1FX0,2DPY,1VDZ,3J9T


Conserved Protein Domain Family
ATP-synt_F1_V1_A1_AB_FliI_N

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cd01426: ATP-synt_F1_V1_A1_AB_FliI_N 
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ATP synthase, alpha/beta subunits of F1/V1/A1 complex, flagellum-specific ATPase FliI, N-terminal domain
The alpha and beta (or A and B) subunits are primarily found in the F1, V1, and A1 complexes of the F-, V- and A-type family of ATPases with rotary motors. These ion-transporting rotary ATPases are composed of two linked multi-subunit complexes: the F1, V1, or A1 complex which contains three copies each of the alpha and beta subunits that form the soluble catalytic core involved in ATP synthesis/hydrolysis, and the Fo, Vo, or Ao complex which forms the membrane-embedded proton pore. The F-ATP synthases (also called FoF1-ATPases) are found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts, or in the plasma membranes of bacteria. F-ATPases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis. The A-ATP synthases (AoA1-ATPases), a different class of proton-translocating ATP synthases, are found in archaea and function like F-ATP synthases. Structurally, however, the A-ATP synthases are more closely related to the V-ATP synthases (vacuolar VoV1-ATPases), which are a proton-translocating ATPase responsible for acidification of eukaryotic intracellular compartments and for ATP synthesis in archaea and some eubacteria. Collectively, F-, V-, and A-type synthases can function in both ATP synthesis and hydrolysis modes. This family also includes the flagellum-specific ATPase/type III secretory pathway virulence-related protein, which shows extensive similarity to the alpha and beta subunits of F1-ATP synthase.
Statistics
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PSSM-Id: 349738
Aligned: 16 rows
Threshold Bit Score: 61.9444
Created: 12-Dec-2003
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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1SKY_E     3 RGRVIQVMG.[1].VVDVKF.[5].PAIY     NALKIQ.[12].LTLEVALHL.[4].VRTIAMASTDGLIRG      73  Bacillus sp. PS3
2DPY_A    10 YGRLTRATG.[1].VLEATG.[2].LPLG     ATCIIE.[ 9].VESEVVGFN.[3].LFLMPLEEVEGILPG      73  Salmonella typhimurium
1VDZ_A     4 KGRIIRVTG.[1].LVVADG.[2].GAKM.[1].EVVRVG.[ 3].LIGEIIRLE.[3].AVIQVYEETAGVRPG      62  Pyrococcus horikoshii
AAQ66801   4 KGVVKGIVS.[1].LVTVEV.[3].VSQN     EICYID.[ 5].LMSEVIKVI.[3].AYVQVFESTRGMHVG      64  Porphyromonas gingivalis...
O83441     5 KGIVSAVNG.[1].MVSVTF.[3].VSLN     EVGYVH.[ 5].LKAEIIRVR.[3].AQLQVFEITRGVSVG      65  Treponema pallidum
O51121     4 KGKVVGVNG.[1].LVTIEV.[3].VSMN     EVLFVK.[ 5].LKAEVIRIR.[3].VDAQVFELTKGISVG      64  Lyme disease spirochete
Q9Z993    10 QGHVIEAYG.[1].LLRVRF.[3].VRQG     EVAYVN.[ 5].LKAEVIEVA.[3].VKVQVFEDTQGACRG      70  Chlamydophila pneumoniae
3J9T_B    28 YNTVSGVNG.[1].LVILEK.[3].PRYN     EIVNLT.[ 6].RQGQVLEIR.[3].AIVQVFEGTSGIDVK.[1]. 90  baker's yeast
AAG57986  19 YSYLHSING.[1].LIEAEL.[2].VSVG     EVCEIY.[ 9].ARAQVVGFR.[3].TLLNLIGSSVGLTRT      82  Escherichia coli O157:H7...
AAB69192   7 CAHPSRIHG.[1].LLEAPL.[2].VFIG     EICLIE.[ 9].AKAQVVGFK.[3].TILSLIGRAQGLTRE      70  Yersinia enterocolitica

1SKY_E    74 MEVIDTGA 81  Bacillus sp. PS3
2DPY_A    74 ARVYARNG 81  Salmonella typhimurium
1VDZ_A    63 EPVVGTGA 70  Pyrococcus horikoshii
AAQ66801  65 DEAEFTGS 72  Porphyromonas gingivalis W83
O83441    66 DRVEFTGD 73  Treponema pallidum
O51121    65 DLVEFTDK 72  Lyme disease spirochete
Q9Z993    71 ALVTFSGH 78  Chlamydophila pneumoniae
3J9T_B    91 TTVEFTGE 98  baker's yeast
AAG57986  83 AVLKPTGE 90  Escherichia coli O157:H7 EDL933
AAB69192  71 VVIRPTGQ 78  Yersinia enterocolitica
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