1RFN,1APQ,1EMN,1HAE,1YUF,1GL4,1XDT,1G1T


Conserved Protein Domain Family
EGF

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cd00053: EGF 
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Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium.
Statistics
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PSSM-Id: 238010
Aligned: 862 rows
Threshold Bit Score: 25.1298
Created: 1-Nov-2000
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:

1RFN_B       2 TC.[4].GRCE     QFCKN.[4].KVVCSCT     EGYRL.[5].SCE 40   human
2494288    485 EC.[4].HNCD.[2].ALCFN.[3].GHNCVCK     LGYTG.[3].VCK 522  chicken
CAC38842  2249 AC.[2].SLCH.[2].GVCHN.[3].GFFCECR.[1].DGLKG.[1].RCQ 2283 Caenorhabditis elegans
NP_506228  711 EC.[4].HNCD.[2].AKCTN.[3].SFSCQCL     QGYQG.[3].SCI 748  Caenorhabditis elegans
1174423     77 KC.[6].WYCL.[2].AHCFA.[7].VYSCECA     IGFMG.[1].RCE 118  fruit fly
AAD25092   262 AC.[3].NLCL.[2].ANCRN.[5].GFSCECA     EEFHG.[1].YCQ 298  Caenorhabditis elegans
AAF58809  1000 NC.[4].TLCD.[2].AQCRS.[3].GLVCVCN     QGFFG.[3].LCQ 1037 fruit fly
128199     671 PC.[4].HGCD.[2].AACRP.[4].QFTCECS     IGFRG.[3].TCY 709  human
NP_506228  835 AC.[2].YVCD.[2].AECMP.[4].GSECVCK     AGFSG.[3].TCE 871  Caenorhabditis elegans
1711488    205 EC.[5].NDCD.[2].ANCTN.[3].SFTCECD.[1].ELYDN.[9].VCI 250  Strongylocentrotus purpuratus
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