Conserved Protein Domain Family
PHA03247

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PHA03247: PHA03247, with user query added  
large tegument protein UL36; Provisional
Statistics
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PSSM-Id: 223021
Aligned: 7 rows
Threshold Bit Score: 4070.65
Created: 9-Dec-2010
Updated: 16-Jan-2013
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:

query      298 P     CPQVAQPIPQPQ.[2].PQLRAPSP.[9].APPQPPPLSTQPP.[14].QVQRPPRPQSPTQL.[28].LSL 401 
30984464  3020 P     ARRLARPAVSRS.[2].SFALPPDE     LARPRTPEAPAPP.[14].PEPPQGRPPSPAAP.[28].VPR 3114
9629306   2886 R     ARSVPQPPLPQP     PLPQPPLP     QPPLPQPPLPQPP.[14].PLPQPPLPQPPLPP      VTR 2950
56694759  2814 P     VRRLARPAVSRS.[2].SFALPPDS     PERPPPPDSPERP.[14].APRTPGRSDAPLAP.[28].VPR 2908
83722605  2951 P     VRRMARPAVSRS.[2].SFALPPDG     PERPRTPAAATEA      APETPARPDAPLAP.[28].VPR 3031
155041490 2875 R.[4].VSRLSAPQPQPQ.[2].PQPQPQPQ     PQPQPQPQPQPQP.[14].QPQPQPQPQPQPQP.[23].AVR 2968

query      402 .[1].SLSSSRSSTPAKTQPAPPHISH.[1].PS     ASPFPLSLPNHSPLHSFTPTLQPPAH.[1].HH 456 
30984464  3115 .[1].QIPPPAPPREIPAPSPPPPRSH     AP.[5].ASSLALHEEPDAGPVSLKQTLWPPDE.[1].DD 3173
9629306   2951 .[1].LTPQSRDSVPTPESPTHTNTHL.[1].VS.[5].ASSLALHVDSAPPPASLLQTLHISSD.[1].EH 3010
56694759  2909      RVSSPAPSREAPAPSTSSLHDH     DP.[5].ASSLALDEETDPRPVSLKQTLWPPDD.[1].EG 2966
83722605  3032      RVSSPAPSRETPASSTPSLRRH.[1].TS.[5].ASSLALHEETDHGPVSLKQTLWSPDD.[1].EE 3090
155041490 2969 .[1].RAPQNRPSVPASASSTNPRTGS.[1].LS.[5].ASSLALHIDATPPPVSLLQTLYVSDD     ED 3027
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