New Search Structure Home MMDB Conserved Domains PubChem PubMed Entrez BLAST Help Structure related to [gi|29836503|ref|NP_828858.1|] nucleocapsid protein [SARS coronavirus] 6 Low redundancy structures identified View  All similar MMDB Non-identical High redundancy Medium redundancy Low redundancy  sequences, sort by  BLAST E-value BLAST bit score Sequence Identity Aligned Length  and display as  graphic table  at  sequences per page Go « Previous page Jump to page of Next page » Structures    E-value    1e-60 1e-22 1e-09 0.010 0.010 0.010 « Previous page Jump to page of Next page » References: Wang Y, Addess KJ, Chen J, Geer LY, He J, He S, Lu S, Madej T, Marchler-Bauer A, Thiessen PA, Zhang N, Bryant SH (2007), MMDB: annotating protein sequences with Entrez's 3D-structure database, Nucleic Acids Res. 35:(D)298-300. Help | Disclaimer | Write to the Help Desk NCBI | NLM | NIH

109972 pfam00937 Corona_nucleoca Coronavirus nucleocapsid protein 9,21,1,13,35,14,9,49,23,10,59,34,31,91,65,74,165,142,10,188,152,82,270,237,12,285,249,76 false 109972 pfam00937 Corona_nucleoca Coronavirus nucleocapsid protein -1

165109 38861 2GIB_A Chain A, Crystal Structure Of The Sars Coronavirus Nucleocapsid Protein Dimerization Domain 99032574 1 169946 39967 2GEC_B Chain B, Structure Of The N-Terminal Domain Of Avian Infectious Bronchitis Virus Nucleocapsid Protein (Strain Gray) In A Novel Dimeric Arrangement 110590262 1 169936 39965 2GE7_B Chain B, Structure Of The C-Terminal Dimerization Domain Of Infectious Bronchitis Virus Nucleocapsid Protein 110590252 1 169946 39967 2GEC_B Chain B, Structure Of The N-Terminal Domain Of Avian Infectious Bronchitis Virus Nucleocapsid Protein (Strain Gray) In A Novel Dimeric Arrangement 110590262 2 169946 39967 2GEC_B Chain B, Structure Of The N-Terminal Domain Of Avian Infectious Bronchitis Virus Nucleocapsid Protein (Strain Gray) In A Novel Dimeric Arrangement 110590262 3 169946 39967 2GEC_B Chain B, Structure Of The N-Terminal Domain Of Avian Infectious Bronchitis Virus Nucleocapsid Protein (Strain Gray) In A Novel Dimeric Arrangement 110590262 4

The "Protein Families" text link opens a cutomizable view of the conserved domains found on the protein chain. This is the results page for a CD-Search of the protein chain against the Conserved Domain Database. The domain families are determined through the identification of blocks of amino acid residues that have been conserved across a broad range of taxonomic nodes and therefore represent recurring units of molecular evolution. The CDD help document provides more details about domains as well as specific hits, superfamilies, and multi-domains.