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Downloading and Installing Cn3D on Unix

The latest version of Cn3D may be downloaded via anonymous ftp from the NCBI file server. Cn3D is supplied as a compressed tar archive. You may use your WWW-browser to obtain Cn3D here, or use the FTP instructions below from a command-line prompt.

WWW Downloading

  • Download the correct version of Cn3D for your operating system: Sun Solaris, SGI Irix 6.x, SGI Irix5.3, Linux, or DEC Alpha OSF1.
  • If this is your first time using Cn3D, make a directory for Cn3D using the unix shell, e.g. mkdir Cn3D
  • Change directory, e.g. cd Cn3D, to your Cn3D directory.
  • Remove old files from any existing Cn3D directory. For example, remove any old Cn3D or netentcf applications,and "asnload" or "data" directories and contents.
  • Move the downloaded file into the Cn3D directory.
  • In the Cn3D directory, type uncompress *.tar.Z
  • Type tar -xvf *.tar This will extract into the "data" directory and the Cn3D executable.
  • If you are not already, run an X window manager. Note that your system must be configured for the appropriate version of the X Window System (X11R4, X11R5 or X11R6).
  • Type "./Cn3D" to run Cn3D.
  • Set up Cn3D as a Helper Application


FTP Downloading

  • Type ftp ncbi.nlm.nih.gov
  • Enter anonymous as the user name.
  • Enter your Internet e-mail address as the password.
  • Type bin to set the binary transfer mode.
  • Type cd cn3d
  • Type ls to get a list of tar archives. You will recognize a file named "*.tar.Z" where the * is either "sun", "solaris", "sgi", sgi5.3", "linux", or "alphaOSF1".
  • Type get followed by name of the tar archive for your system, e.g. "get sun.tar.Z".
  • Type quit
  • Continue with the WWW Download instructions above, starting on the second line.
 
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