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Reference SNP(refSNP) Cluster Report: rs8179071          
RefSNP
Organism:human (Homo sapiens)
Molecule Type:Genomic
Created/Updated in build:117/130
Map to Genome Build:36.3
Citation: PubMed
Allele
Variation Class:SNP:
single nucleotide polymorphism
RefSNP Alleles:C/T
Ancestral Allele:C
Clinical Association:unknown
HGVS Names
NM_002666.3:c.1043C>T
NP_002657.2:p.Ser348Leu
NT_010274.16:g.5175860G>A
Links , Linkout

SNP Details are organized in the following sections:
Submission Fasta Resource GeneView Map Diversity Validation

  Submitter records for this RefSNP Cluster back to top
The submission ss12535107 has the longest flanking sequence of all cluster members and was used to instantiate sequence for rs8179071 during BLAST analysis for the current build.

NCBI
Assay ID		Handle|Submitter IDValidation
Status		ss to rs
Orientation
/Strand		Alleles5' Near Seq 30 bp3' Near Seq 30 bpEntry
Date		Update
Date		Build
Added		Molecule
Type		Freq
Warning		Ancestral
Allele		Success
Rate
ss12535107GBELL|UCSNP-552byFreqfwd/BC/Tccctgcagaagaccctccagaccaccatctggctgtgacatgggcacctgcagctgtgct07/07/0303/31/08117Genomicunknown
ss69184495PERLEGEN|PGP04778451byFreqrev/TA/Gagcacagctgcaggtgcccatgtcacagccagatggtggtctggagggtcttctgcaggg01/30/0703/31/08127Genomicunknown
ss74814720AFFY|SNP_M-307847fwd/BC/Tccctgcagaagaccctccagaccaccatctggctgtgacatgggcacctgcagctgtgct08/09/0708/09/07128Genomicunknown
ss74859781ILLUMINA|ILMN_Human_1M_rs8179071fwd/BC/Tccctgcagaagaccctccagaccaccatctggctgtgacatgggcacctgcagctgtgct08/28/0708/29/07129Genomicunknown

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|rs8179071|allelePos=201|totalLen=401|taxid=9606|snpclass=1|alleles='C/T'|mol=Genomic|build=129
 ATAGGCCTGA AGTTTTGTAA ATTTGGTATT CTCATGCTTT CCCCTCTAGC CCTGGGGCTG
 GTGGGGAGGG AAGGGTCAGG GGAGTTACCA CAGGAGGCAC TGACCCTGCT TTGGCCCCCA
 GGTAGCAGCC CTGCCAGGCC CTCGAGGCCT CCTGGGTGGT GTGGCACATA CCCTGCAGAA
 GACCCTCCAG ACCACCATCT
 Y
 GGCTGTGACA TGGGCACCTG CAGCTGTGCT GGGCATGGCA GGGAGGGTGC TGCACCTCAC
 ACCAGCCCCT GCTGTCTCCT CAACCAAGGG GAGGGCCATG TCCCTATCAG ATGCCCTGAA
 GGGCGTTACT GACAACGTGG TGGACACAGT GGTGCATTAC GTGCCGGTGA GTACCACCCC
 TGGCAAACTG TTAGTGTCCC

  GeneView back to top

GeneView via analysis of contig annotation:  

View more variation on this gene (click to hide).
Include clinically associated: in gene region cSNP has frequency double hit
Assembly SNP to Chr Chr Chr position Contig Contig position Allele
Function mRNA Protein
mRNA to Chr Accession Position Allele change Accession Position Residue change
on assembly: is labeled at position on chromosome .

GeneView via analysis of contig annotation: N/A.

GeneView via direct blast against RefSeq sequences (used when no gene model is available):

Function Chr mRNA Protein
SNP to mRNA Accession Position Allele change Accession Position Residue change
on assembly: is labeled at position on chromosome .

GeneView via direct blast against RefSeq sequences (used when no gene model is available): N/A


  Integrated Maps: back to top
Genome Build Chr Chr Pos Contig Contig Pos SNP to
Chr		 Contig
allele		 Group term Group label Contig label Neighbor
SNP		 Map Method
doesn't map to any assembly.

  NCBI Resource Links back to top
Resource
Submitter-Referenced
GenBank
NC_000015.8
dbSNP Blast Analysis
UniGene Cluster ID
103253

  Population Diversity back to top

Sample AscertainmentGenotype Detailnew.gifAlleles
ss# Population Individual
Group		 Chrom.
Sample Cnt.
 Source C/C
 C/T
 HWP C
 T
ss12535107 HapMap-CEU European 116 IG 0.966 0.034 0.983 0.017
HapMap-HCB Asian 88 IG 1.000 1.000
HapMap-JPT Asian 82 IG 1.000 1.000
HapMap-YRI Sub-Saharan African 116 IG 1.000 1.000
ss69184495 HapMap-CEU European 120 GF 1.000 0.500 0.500
HapMap-HCB Asian 90 GF 1.000 0.500 0.500
HapMap-JPT Asian 90 GF 1.000 0.500 0.500
HapMap-YRI Sub-Saharan African 118 GF 1.000 0.500 0.500
Concordant Genotype Total Sample C/C C/T
ss12535107 357 273 22
RefSNP Genotype Summary Total Individual C/C C/T
rs8179071 613 273 22
Discordant Genotypes:
Indiviudal
SampleID		 SubSNP(ss) Genotype Population
Handle		 Submitter
Population		 Submitter
SampleID		 SampleID
Alias		 Submission
Batch		 NCBI
ProbeID
150 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA10846 CEPH1334.01 r27_ch15_CEU_illumina:human_1m_beadchip
151 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA10847 CEPH1334.02 r27_ch15_CEU_illumina:human_1m_beadchip
158 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA12145 CEPH1334.11 r27_ch15_CEU_illumina:human_1m_beadchip
159 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA12146 CEPH1334.12 r27_ch15_CEU_illumina:human_1m_beadchip
160 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA12239 CEPH1334.13 r27_ch15_CEU_illumina:human_1m_beadchip
161 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA07029 CEPH1340.01 r27_ch15_CEU_illumina:human_1m_beadchip
162 ss12535107 N/N CSHL-HAPMAP HapMap-CEU NA07019 CEPH1340.02 r27_ch15_CEU_illumina:human_1m_beadchip
169 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA06994 CEPH1340.09 r27_ch15_CEU_illumina:human_1m_beadchip
170 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA07000 CEPH1340.10 r27_ch15_CEU_illumina:human_1m_beadchip
171 ss12535107 C/T CSHL-HAPMAP HapMap-CEU NA07022 CEPH1340.11 r27_ch15_CEU_illumina:human_1m_beadchip
172 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA07056 CEPH1340.12 r27_ch15_CEU_illumina:human_1m_beadchip
174 ss12535107 N/N CSHL-HAPMAP HapMap-CEU NA07048 CEPH1341.01 r27_ch15_CEU_illumina:human_1m_beadchip
175 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA06991 CEPH1341.02 r27_ch15_CEU_illumina:human_1m_beadchip
184 ss12535107 N/N CSHL-HAPMAP HapMap-CEU NA07034 CEPH1341.11 r27_ch15_CEU_illumina:human_1m_beadchip
185 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA07055 CEPH1341.12 r27_ch15_CEU_illumina:human_1m_beadchip
186 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA06993 CEPH1341.13 r27_ch15_CEU_illumina:human_1m_beadchip
187 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA06985 CEPH1341.14 r27_ch15_CEU_illumina:human_1m_beadchip
188 ss12535107 N/N CSHL-HAPMAP HapMap-CEU NA10851 CEPH1344.01 r27_ch15_CEU_illumina:human_1m_beadchip
199 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA12056 CEPH1344.12 r27_ch15_CEU_illumina:human_1m_beadchip
200 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA12057 CEPH1344.13 r27_ch15_CEU_illumina:human_1m_beadchip
203 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA07348 CEPH1345.02 r27_ch15_CEU_illumina:human_1m_beadchip
213 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA07357 CEPH1345.12 r27_ch15_CEU_illumina:human_1m_beadchip
214 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA07345 CEPH1345.13 r27_ch15_CEU_illumina:human_1m_beadchip
215 ss12535107 N/N CSHL-HAPMAP HapMap-CEU NA10857 CEPH1346.01 r27_ch15_CEU_illumina:human_1m_beadchip
225 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA12043 CEPH1346.11 r27_ch15_CEU_illumina:human_1m_beadchip
226 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA12044 CEPH1346.12 r27_ch15_CEU_illumina:human_1m_beadchip
229 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA10859 CEPH1347.02 r27_ch15_CEU_illumina:human_1m_beadchip
238 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA11881 CEPH1347.14 r27_ch15_CEU_illumina:human_1m_beadchip
239 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA11882 CEPH1347.15 r27_ch15_CEU_illumina:human_1m_beadchip
252 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA11839 CEPH1349.13 r27_ch15_CEU_illumina:human_1m_beadchip
254 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA10856 CEPH1350.01 r27_ch15_CEU_illumina:human_1m_beadchip
255 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA10855 CEPH1350.02 r27_ch15_CEU_illumina:human_1m_beadchip
262 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA11829 CEPH1350.10 r27_ch15_CEU_illumina:human_1m_beadchip
263 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA11830 CEPH1350.11 r27_ch15_CEU_illumina:human_1m_beadchip
264 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA11831 CEPH1350.12 r27_ch15_CEU_illumina:human_1m_beadchip
265 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA11832 CEPH1350.13 r27_ch15_CEU_illumina:human_1m_beadchip
335 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA12707 CEPH1358.01 r27_ch15_CEU_illumina:human_1m_beadchip
344 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA12716 CEPH1358.11 r27_ch15_CEU_illumina:human_1m_beadchip
348 ss12535107 N/N CSHL-HAPMAP HapMap-CEU NA10860 CEPH1362.01 r27_ch15_CEU_illumina:human_1m_beadchip
349 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA10861 CEPH1362.02 r27_ch15_CEU_illumina:human_1m_beadchip
360 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA11992 CEPH1362.13 r27_ch15_CEU_illumina:human_1m_beadchip
361 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA11993 CEPH1362.14 r27_ch15_CEU_illumina:human_1m_beadchip
362 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA11994 CEPH1362.15 r27_ch15_CEU_illumina:human_1m_beadchip
363 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA11995 CEPH1362.16 r27_ch15_CEU_illumina:human_1m_beadchip
366 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA10863 CEPH1375.02 r27_ch15_CEU_illumina:human_1m_beadchip
373 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA12264 CEPH1375.11 r27_ch15_CEU_illumina:human_1m_beadchip
374 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA12234 CEPH1375.12 r27_ch15_CEU_illumina:human_1m_beadchip
399 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA10830 CEPH1408.01 r27_ch15_CEU_illumina:human_1m_beadchip
400 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA10831 CEPH1408.02 r27_ch15_CEU_illumina:human_1m_beadchip
409 ss12535107 N/N CSHL-HAPMAP HapMap-CEU NA12236 CEPH1408.11 r27_ch15_CEU_illumina:human_1m_beadchip
410 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA12155 CEPH1408.12 r27_ch15_CEU_illumina:human_1m_beadchip
411 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA12156 CEPH1408.13 r27_ch15_CEU_illumina:human_1m_beadchip
429 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA10835 CEPH1416.01 r27_ch15_CEU_illumina:human_1m_beadchip
438 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA12248 CEPH1416.11 r27_ch15_CEU_illumina:human_1m_beadchip
439 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA12249 CEPH1416.12 r27_ch15_CEU_illumina:human_1m_beadchip
456 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA10838 CEPH1420.01 r27_ch15_CEU_illumina:human_1m_beadchip
457 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA10839 CEPH1420.02 r27_ch15_CEU_illumina:human_1m_beadchip
464 ss12535107 N/N CSHL-HAPMAP HapMap-CEU NA12003 CEPH1420.09 r27_ch15_CEU_illumina:human_1m_beadchip
465 ss12535107 N/N CSHL-HAPMAP HapMap-CEU NA12004 CEPH1420.10 r27_ch15_CEU_illumina:human_1m_beadchip
466 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA12005 CEPH1420.11 r27_ch15_CEU_illumina:human_1m_beadchip
467 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA12006 CEPH1420.12 r27_ch15_CEU_illumina:human_1m_beadchip
524 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA12740 CEPH1444.02 r27_ch15_CEU_illumina:human_1m_beadchip
535 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA12750 CEPH1444.13 r27_ch15_CEU_illumina:human_1m_beadchip
536 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA12751 CEPH1444.14 r27_ch15_CEU_illumina:human_1m_beadchip
537 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA12752 CEPH1447.01 r27_ch15_CEU_illumina:human_1m_beadchip
538 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA12753 CEPH1447.02 r27_ch15_CEU_illumina:human_1m_beadchip
545 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA12760 CEPH1447.09 r27_ch15_CEU_illumina:human_1m_beadchip
546 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA12761 CEPH1447.10 r27_ch15_CEU_illumina:human_1m_beadchip
547 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA12762 CEPH1447.11 r27_ch15_CEU_illumina:human_1m_beadchip
548 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA12763 CEPH1447.12 r27_ch15_CEU_illumina:human_1m_beadchip
565 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA12801 CEPH1454.01 r27_ch15_CEU_illumina:human_1m_beadchip
566 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA12802 CEPH1454.02 r27_ch15_CEU_illumina:human_1m_beadchip
576 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA12812 CEPH1454.12 r27_ch15_CEU_illumina:human_1m_beadchip
577 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA12813 CEPH1454.13 r27_ch15_CEU_illumina:human_1m_beadchip
578 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA12814 CEPH1454.14 r27_ch15_CEU_illumina:human_1m_beadchip
579 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA12815 CEPH1454.15 r27_ch15_CEU_illumina:human_1m_beadchip
610 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA12864 CEPH1459.01 r27_ch15_CEU_illumina:human_1m_beadchip
611 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA12865 CEPH1459.02 r27_ch15_CEU_illumina:human_1m_beadchip
618 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA12872 CEPH1459.09 r27_ch15_CEU_illumina:human_1m_beadchip
619 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA12873 CEPH1459.10 r27_ch15_CEU_illumina:human_1m_beadchip
620 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA12874 CEPH1459.11 r27_ch15_CEU_illumina:human_1m_beadchip
621 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA12875 CEPH1459.12 r27_ch15_CEU_illumina:human_1m_beadchip
623 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA12878 CEPH1463.02 r27_ch15_CEU_illumina:human_1m_beadchip
636 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA12891 CEPH1463.15 r27_ch15_CEU_illumina:human_1m_beadchip
637 ss12535107 C/C CSHL-HAPMAP HapMap-CEU NA12892 CEPH1463.16 r27_ch15_CEU_illumina:human_1m_beadchip
5132 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA18500 YOR004.01 r27_ch15_YRI_illumina:human_1m_beadchip
5133 ss12535107 N/N CSHL-HAPMAP HapMap-YRI NA18502 YOR004.02 r27_ch15_YRI_illumina:human_1m_beadchip
5134 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA19127 YOR077.02 r27_ch15_YRI_illumina:human_1m_beadchip
5135 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA19128 YOR077.03 r27_ch15_YRI_illumina:human_1m_beadchip
5136 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA19132 YOR101.01 r27_ch15_YRI_illumina:human_1m_beadchip
5137 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA19131 YOR101.02 r27_ch15_YRI_illumina:human_1m_beadchip
5138 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA19130 YOR101.03 r27_ch15_YRI_illumina:human_1m_beadchip
5139 ss12535107 N/N CSHL-HAPMAP HapMap-YRI NA19100 YOR105.01 r27_ch15_YRI_illumina:human_1m_beadchip
5140 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA19099 YOR105.02 r27_ch15_YRI_illumina:human_1m_beadchip
5141 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA19098 YOR105.03 r27_ch15_YRI_illumina:human_1m_beadchip
5142 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA19194 YOR112.01 r27_ch15_YRI_illumina:human_1m_beadchip
5143 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA19193 YOR112.02 r27_ch15_YRI_illumina:human_1m_beadchip
5144 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA19192 YOR112.03 r27_ch15_YRI_illumina:human_1m_beadchip
5145 ss12535107 N/N CSHL-HAPMAP HapMap-YRI NA19240 YOR117.01 r27_ch15_YRI_illumina:human_1m_beadchip
5146 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA19238 YOR117.02 r27_ch15_YRI_illumina:human_1m_beadchip
5147 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA19239 YOR117.03 r27_ch15_YRI_illumina:human_1m_beadchip
5148 ss12535107 C/C CSHL-HAPMAP HapMap-HCB NA18526 CH18526 r27_ch15_CHB_illumina:human_1m_beadchip
5149 ss12535107 C/C CSHL-HAPMAP HapMap-HCB NA18524 CH18524 r27_ch15_CHB_illumina:human_1m_beadchip
5150 ss12535107 C/C CSHL-HAPMAP HapMap-HCB NA18529 CH18529 r27_ch15_CHB_illumina:human_1m_beadchip
5151 ss12535107 C/C CSHL-HAPMAP HapMap-HCB NA18558 CH18558 r27_ch15_CHB_illumina:human_1m_beadchip
5152 ss12535107 C/C CSHL-HAPMAP HapMap-HCB NA18532 CH18532 r27_ch15_CHB_illumina:human_1m_beadchip
5153 ss12535107 C/C CSHL-HAPMAP HapMap-HCB NA18561 CH18561 r27_ch15_CHB_illumina:human_1m_beadchip
5154 ss12535107 C/C CSHL-HAPMAP HapMap-HCB NA18562 CH18562 r27_ch15_CHB_illumina:human_1m_beadchip
5155 ss12535107 C/C CSHL-HAPMAP HapMap-HCB NA18537 CH18537 r27_ch15_CHB_illumina:human_1m_beadchip
5156 ss12535107 C/C CSHL-HAPMAP HapMap-HCB NA18603 CH18603 r27_ch15_CHB_illumina:human_1m_beadchip
5157 ss12535107 N/N CSHL-HAPMAP HapMap-HCB NA18540 CH18540 r27_ch15_CHB_illumina:human_1m_beadchip
5158 ss12535107 C/C CSHL-HAPMAP HapMap-HCB NA18605 CH18605 r27_ch15_CHB_illumina:human_1m_beadchip
5159 ss12535107 C/C CSHL-HAPMAP HapMap-HCB NA18542 CH18542 r27_ch15_CHB_illumina:human_1m_beadchip
5160 ss12535107 C/C CSHL-HAPMAP HapMap-HCB NA18545 CH18545 r27_ch15_CHB_illumina:human_1m_beadchip
5161 ss12535107 C/C CSHL-HAPMAP HapMap-HCB NA18572 CH18572 r27_ch15_CHB_illumina:human_1m_beadchip
5162 ss12535107 N/N CSHL-HAPMAP HapMap-HCB NA18547 CH18547 r27_ch15_CHB_illumina:human_1m_beadchip
5163 ss12535107 C/T CSHL-HAPMAP HapMap-HCB NA18609 CH18609 r27_ch15_CHB_illumina:human_1m_beadchip
5164 ss12535107 C/C CSHL-HAPMAP HapMap-HCB NA18550 CH18550 r27_ch15_CHB_illumina:human_1m_beadchip
5165 ss12535107 C/C CSHL-HAPMAP HapMap-HCB NA18608 CH18608 r27_ch15_CHB_illumina:human_1m_beadchip
5166 ss12535107 C/C CSHL-HAPMAP HapMap-HCB NA18552 CH18552 r27_ch15_CHB_illumina:human_1m_beadchip
5167 ss12535107 C/C CSHL-HAPMAP HapMap-HCB NA18611 CH18611 r27_ch15_CHB_illumina:human_1m_beadchip
5168 ss12535107 C/C CSHL-HAPMAP HapMap-HCB NA18555 CH18555 r27_ch15_CHB_illumina:human_1m_beadchip
5169 ss12535107 C/C CSHL-HAPMAP HapMap-HCB NA18564 CH18564 r27_ch15_CHB_illumina:human_1m_beadchip
5170 ss12535107 C/C CSHL-HAPMAP HapMap-HCB NA18566 CH18566 r27_ch15_CHB_illumina:human_1m_beadchip
5172 ss12535107 C/C CSHL-HAPMAP HapMap-HCB NA18570 CH18570 r27_ch15_CHB_illumina:human_1m_beadchip
5173 ss12535107 C/C CSHL-HAPMAP HapMap-HCB NA18612 CH18612 r27_ch15_CHB_illumina:human_1m_beadchip
5174 ss12535107 C/C CSHL-HAPMAP HapMap-HCB NA18571 CH18571 r27_ch15_CHB_illumina:human_1m_beadchip
5175 ss12535107 C/C CSHL-HAPMAP HapMap-HCB NA18620 CH18620 r27_ch15_CHB_illumina:human_1m_beadchip
5176 ss12535107 C/C CSHL-HAPMAP HapMap-HCB NA18621 CH18621 r27_ch15_CHB_illumina:human_1m_beadchip
5177 ss12535107 C/C CSHL-HAPMAP HapMap-HCB NA18594 CH18594 r27_ch15_CHB_illumina:human_1m_beadchip
5178 ss12535107 C/C CSHL-HAPMAP HapMap-HCB NA18622 CH18622 r27_ch15_CHB_illumina:human_1m_beadchip
5179 ss12535107 C/C CSHL-HAPMAP HapMap-HCB NA18573 CH18573 r27_ch15_CHB_illumina:human_1m_beadchip
5180 ss12535107 C/C CSHL-HAPMAP HapMap-HCB NA18623 CH18623 r27_ch15_CHB_illumina:human_1m_beadchip
5181 ss12535107 N/N CSHL-HAPMAP HapMap-HCB NA18576 CH18576 r27_ch15_CHB_illumina:human_1m_beadchip
5182 ss12535107 C/C CSHL-HAPMAP HapMap-HCB NA18577 CH18577 r27_ch15_CHB_illumina:human_1m_beadchip
5183 ss12535107 C/C CSHL-HAPMAP HapMap-HCB NA18624 CH18624 r27_ch15_CHB_illumina:human_1m_beadchip
5184 ss12535107 C/C CSHL-HAPMAP HapMap-HCB NA18579 CH18579 r27_ch15_CHB_illumina:human_1m_beadchip
5185 ss12535107 C/C CSHL-HAPMAP HapMap-HCB NA18632 CH18632 r27_ch15_CHB_illumina:human_1m_beadchip
5186 ss12535107 C/C CSHL-HAPMAP HapMap-HCB NA18582 CH18582 r27_ch15_CHB_illumina:human_1m_beadchip
5187 ss12535107 C/C CSHL-HAPMAP HapMap-HCB NA18633 CH18633 r27_ch15_CHB_illumina:human_1m_beadchip
5188 ss12535107 C/C CSHL-HAPMAP HapMap-HCB NA18635 CH18635 r27_ch15_CHB_illumina:human_1m_beadchip
5189 ss12535107 C/C CSHL-HAPMAP HapMap-HCB NA18592 CH18592 r27_ch15_CHB_illumina:human_1m_beadchip
5190 ss12535107 C/C CSHL-HAPMAP HapMap-HCB NA18636 CH18636 r27_ch15_CHB_illumina:human_1m_beadchip
5191 ss12535107 C/C CSHL-HAPMAP HapMap-HCB NA18593 CH18593 r27_ch15_CHB_illumina:human_1m_beadchip
5192 ss12535107 C/C CSHL-HAPMAP HapMap-HCB NA18637 CH18637 r27_ch15_CHB_illumina:human_1m_beadchip
5193 ss12535107 C/C CSHL-HAPMAP HapMap-JPT NA18942 JA18942 r27_ch15_JPT_bcm:genotype_0002
5194 ss12535107 C/C CSHL-HAPMAP HapMap-JPT NA18940 JA18940 r27_ch15_JPT_bcm:genotype_0002
5195 ss12535107 C/C CSHL-HAPMAP HapMap-JPT NA18951 JA18951 r27_ch15_JPT_bcm:genotype_0002
5196 ss12535107 C/C CSHL-HAPMAP HapMap-JPT NA18943 JA18943 r27_ch15_JPT_bcm:genotype_0002
5198 ss12535107 C/C CSHL-HAPMAP HapMap-JPT NA18944 JA18944 r27_ch15_JPT_bcm:genotype_0002
5199 ss12535107 C/C CSHL-HAPMAP HapMap-JPT NA18945 JA18945 r27_ch15_JPT_bcm:genotype_0002
5200 ss12535107 C/C CSHL-HAPMAP HapMap-JPT NA18949 JA18949 r27_ch15_JPT_bcm:genotype_0002
5201 ss12535107 C/C CSHL-HAPMAP HapMap-JPT NA18948 JA18948 r27_ch15_JPT_bcm:genotype_0002
5203 ss12535107 C/C CSHL-HAPMAP HapMap-JPT NA18956 JA18956 r27_ch15_JPT_bcm:genotype_0002
5204 ss12535107 C/C CSHL-HAPMAP HapMap-JPT NA18964 JA18964 r27_ch15_JPT_bcm:genotype_0002
5205 ss12535107 C/C CSHL-HAPMAP HapMap-JPT NA18953 JA18953 r27_ch15_JPT_bcm:genotype_0002
5206 ss12535107 C/C CSHL-HAPMAP HapMap-JPT NA18968 JA18968 r27_ch15_JPT_bcm:genotype_0002
5207 ss12535107 C/C CSHL-HAPMAP HapMap-JPT NA18959 JA18959 r27_ch15_JPT_bcm:genotype_0002
5208 ss12535107 C/C CSHL-HAPMAP HapMap-JPT NA18969 JA18969 r27_ch15_JPT_bcm:genotype_0002
5209 ss12535107 C/C CSHL-HAPMAP HapMap-JPT NA18960 JA18960 r27_ch15_JPT_bcm:genotype_0002
5210 ss12535107 C/C CSHL-HAPMAP HapMap-JPT NA18961 JA18961 r27_ch15_JPT_bcm:genotype_0002
5211 ss12535107 C/C CSHL-HAPMAP HapMap-JPT NA18972 JA18972 r27_ch15_JPT_bcm:genotype_0002
5212 ss12535107 C/C CSHL-HAPMAP HapMap-JPT NA18965 JA18965 r27_ch15_JPT_bcm:genotype_0002
5213 ss12535107 C/C CSHL-HAPMAP HapMap-JPT NA18973 JA18973 r27_ch15_JPT_bcm:genotype_0002
5214 ss12535107 C/C CSHL-HAPMAP HapMap-JPT NA18966 JA18966 r27_ch15_JPT_bcm:genotype_0002
5215 ss12535107 C/C CSHL-HAPMAP HapMap-JPT NA18975 JA18975 r27_ch15_JPT_bcm:genotype_0002
5216 ss12535107 C/C CSHL-HAPMAP HapMap-JPT NA18967 JA18967 r27_ch15_JPT_bcm:genotype_0002
5217 ss12535107 C/C CSHL-HAPMAP HapMap-JPT NA18976 JA18976 r27_ch15_JPT_bcm:genotype_0002
5218 ss12535107 C/C CSHL-HAPMAP HapMap-JPT NA18978 JA18978 r27_ch15_JPT_bcm:genotype_0002
5219 ss12535107 C/C CSHL-HAPMAP HapMap-JPT NA18970 JA18970 r27_ch15_JPT_bcm:genotype_0002
5220 ss12535107 C/C CSHL-HAPMAP HapMap-JPT NA18980 JA18980 r27_ch15_JPT_bcm:genotype_0002
5221 ss12535107 C/C CSHL-HAPMAP HapMap-JPT NA18995 JA18995 r27_ch15_JPT_bcm:genotype_0002
5222 ss12535107 C/C CSHL-HAPMAP HapMap-JPT NA18981 JA18981 r27_ch15_JPT_bcm:genotype_0002
5223 ss12535107 C/C CSHL-HAPMAP HapMap-JPT NA18971 JA18971 r27_ch15_JPT_bcm:genotype_0002
5224 ss12535107 C/C CSHL-HAPMAP HapMap-JPT NA18974 JA18974 r27_ch15_JPT_bcm:genotype_0002
5225 ss12535107 C/C CSHL-HAPMAP HapMap-JPT NA18987 JA18987 r27_ch15_JPT_bcm:genotype_0002
5226 ss12535107 C/C CSHL-HAPMAP HapMap-JPT NA18990 JA18990 r27_ch15_JPT_bcm:genotype_0002
5227 ss12535107 C/C CSHL-HAPMAP HapMap-JPT NA18991 JA18991 r27_ch15_JPT_bcm:genotype_0002
5228 ss12535107 C/C CSHL-HAPMAP HapMap-JPT NA18994 JA18994 r27_ch15_JPT_bcm:genotype_0002
5230 ss12535107 C/C CSHL-HAPMAP HapMap-JPT NA18997 JA18997 r27_ch15_JPT_bcm:genotype_0002
5231 ss12535107 C/C CSHL-HAPMAP HapMap-JPT NA18998 JA18998 r27_ch15_JPT_bcm:genotype_0002
5232 ss12535107 C/C CSHL-HAPMAP HapMap-JPT NA19000 JA19000 r27_ch15_JPT_bcm:genotype_0002
5233 ss12535107 C/C CSHL-HAPMAP HapMap-JPT NA19005 JA19005 r27_ch15_JPT_bcm:genotype_0002
5234 ss12535107 C/C CSHL-HAPMAP HapMap-JPT NA18999 JA18999 r27_ch15_JPT_bcm:genotype_0002
5235 ss12535107 C/C CSHL-HAPMAP HapMap-JPT NA19007 JA19007 r27_ch15_JPT_bcm:genotype_0002
5236 ss12535107 C/C CSHL-HAPMAP HapMap-JPT NA19003 JA19003 r27_ch15_JPT_bcm:genotype_0002
5237 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA18501 YOR004.03 r27_ch15_YRI_illumina:human_1m_beadchip
5238 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA18503 YOR005.01 r27_ch15_YRI_illumina:human_1m_beadchip
5239 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA18505 YOR005.02 r27_ch15_YRI_illumina:human_1m_beadchip
5240 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA18504 YOR005.03 r27_ch15_YRI_illumina:human_1m_beadchip
5241 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA18506 YOR009.01 r27_ch15_YRI_illumina:human_1m_beadchip
5242 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA18508 YOR009.02 r27_ch15_YRI_illumina:human_1m_beadchip
5243 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA18507 YOR009.03 r27_ch15_YRI_illumina:human_1m_beadchip
5244 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA18860 YOR012.01 r27_ch15_YRI_illumina:human_1m_beadchip
5245 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA18858 YOR012.02 r27_ch15_YRI_illumina:human_1m_beadchip
5246 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA18859 YOR012.03 r27_ch15_YRI_illumina:human_1m_beadchip
5247 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA18515 YOR013.01 r27_ch15_YRI_illumina:human_1m_beadchip
5248 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA18517 YOR013.02 r27_ch15_YRI_illumina:human_1m_beadchip
5250 ss12535107 N/N CSHL-HAPMAP HapMap-YRI NA18521 YOR016.01 r27_ch15_YRI_illumina:human_1m_beadchip
5251 ss12535107 N/N CSHL-HAPMAP HapMap-YRI NA18523 YOR016.02 r27_ch15_YRI_illumina:human_1m_beadchip
5252 ss12535107 N/N CSHL-HAPMAP HapMap-YRI NA18522 YOR016.03 r27_ch15_YRI_illumina:human_1m_beadchip
5253 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA18872 YOR017.01 r27_ch15_YRI_illumina:human_1m_beadchip
5254 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA18870 YOR017.02 r27_ch15_YRI_illumina:human_1m_beadchip
5255 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA18871 YOR017.03 r27_ch15_YRI_illumina:human_1m_beadchip
5256 ss12535107 C/T CSHL-HAPMAP HapMap-YRI NA18854 YOR018.01 r27_ch15_YRI_illumina:human_1m_beadchip
5257 ss12535107 N/N CSHL-HAPMAP HapMap-YRI NA18852 YOR018.02 r27_ch15_YRI_illumina:human_1m_beadchip
5258 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA18853 YOR018.03 r27_ch15_YRI_illumina:human_1m_beadchip
5259 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA18857 YOR023.01 r27_ch15_YRI_illumina:human_1m_beadchip
5260 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA18855 YOR023.02 r27_ch15_YRI_illumina:human_1m_beadchip
5261 ss12535107 N/N CSHL-HAPMAP HapMap-YRI NA18856 YOR023.03 r27_ch15_YRI_illumina:human_1m_beadchip
5262 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA18863 YOR024.01 r27_ch15_YRI_illumina:human_1m_beadchip
5263 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA18861 YOR024.02 r27_ch15_YRI_illumina:human_1m_beadchip
5264 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA18862 YOR024.03 r27_ch15_YRI_illumina:human_1m_beadchip
5265 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA18914 YOR028.01 r27_ch15_YRI_illumina:human_1m_beadchip
5266 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA18912 YOR028.02 r27_ch15_YRI_illumina:human_1m_beadchip
5267 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA18913 YOR028.03 r27_ch15_YRI_illumina:human_1m_beadchip
5268 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA19094 YOR040.01 r27_ch15_YRI_illumina:human_1m_beadchip
5269 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA19093 YOR040.02 r27_ch15_YRI_illumina:human_1m_beadchip
5270 ss12535107 N/N CSHL-HAPMAP HapMap-YRI NA19092 YOR040.03 r27_ch15_YRI_illumina:human_1m_beadchip
5272 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA19102 YOR042.02 r27_ch15_YRI_illumina:human_1m_beadchip
5273 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA19101 YOR042.03 r27_ch15_YRI_illumina:human_1m_beadchip
5274 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA19139 YOR043.01 r27_ch15_YRI_illumina:human_1m_beadchip
5275 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA19137 YOR043.02 r27_ch15_YRI_illumina:human_1m_beadchip
5276 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA19138 YOR043.03 r27_ch15_YRI_illumina:human_1m_beadchip
5277 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA19202 YOR045.01 r27_ch15_YRI_illumina:human_1m_beadchip
5278 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA19201 YOR045.02 r27_ch15_YRI_illumina:human_1m_beadchip
5279 ss12535107 N/N CSHL-HAPMAP HapMap-YRI NA19200 YOR045.03 r27_ch15_YRI_illumina:human_1m_beadchip
5280 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA19173 YOR047.01 r27_ch15_YRI_illumina:human_1m_beadchip
5281 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA19172 YOR047.02 r27_ch15_YRI_illumina:human_1m_beadchip
5282 ss12535107 C/T CSHL-HAPMAP HapMap-YRI NA19171 YOR047.03 r27_ch15_YRI_illumina:human_1m_beadchip
5283 ss12535107 N/N CSHL-HAPMAP HapMap-YRI NA19205 YOR048.01 r27_ch15_YRI_illumina:human_1m_beadchip
5284 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA19204 YOR048.02 r27_ch15_YRI_illumina:human_1m_beadchip
5285 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA19203 YOR048.03 r27_ch15_YRI_illumina:human_1m_beadchip
5286 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA19211 YOR050.01 r27_ch15_YRI_illumina:human_1m_beadchip
5288 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA19210 YOR050.03 r27_ch15_YRI_illumina:human_1m_beadchip
5289 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA19208 YOR051.01 r27_ch15_YRI_illumina:human_1m_beadchip
5290 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA19206 YOR051.02 r27_ch15_YRI_illumina:human_1m_beadchip
5291 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA19207 YOR051.03 r27_ch15_YRI_illumina:human_1m_beadchip
5292 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA19161 YOR056.01 r27_ch15_YRI_illumina:human_1m_beadchip
5293 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA19159 YOR056.02 r27_ch15_YRI_illumina:human_1m_beadchip
5294 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA19160 YOR056.03 r27_ch15_YRI_illumina:human_1m_beadchip
5295 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA19221 YOR058.01 r27_ch15_YRI_illumina:human_1m_beadchip
5296 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA19222 YOR058.02 r27_ch15_YRI_illumina:human_1m_beadchip
5297 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA19223 YOR058.03 r27_ch15_YRI_illumina:human_1m_beadchip
5298 ss12535107 N/N CSHL-HAPMAP HapMap-YRI NA19120 YOR060.01 r27_ch15_YRI_illumina:human_1m_beadchip
5299 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA19116 YOR060.02 r27_ch15_YRI_illumina:human_1m_beadchip
5300 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA19119 YOR060.03 r27_ch15_YRI_illumina:human_1m_beadchip
5301 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA19142 YOR071.01 r27_ch15_YRI_illumina:human_1m_beadchip
5303 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA19141 YOR071.03 r27_ch15_YRI_illumina:human_1m_beadchip
5304 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA19154 YOR072.01 r27_ch15_YRI_illumina:human_1m_beadchip
5305 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA19152 YOR072.02 r27_ch15_YRI_illumina:human_1m_beadchip
5306 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA19153 YOR072.03 r27_ch15_YRI_illumina:human_1m_beadchip
5307 ss12535107 N/N CSHL-HAPMAP HapMap-YRI NA19145 YOR074.01 r27_ch15_YRI_illumina:human_1m_beadchip
5308 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA19143 YOR074.02 r27_ch15_YRI_illumina:human_1m_beadchip
5309 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA19144 YOR074.03 r27_ch15_YRI_illumina:human_1m_beadchip
5310 ss12535107 C/C CSHL-HAPMAP HapMap-YRI NA19129 YOR077.01 r27_ch15_YRI_illumina:human_1m_beadchip
Genotype data submitted for613 samples from613 individualsIndividual with multiple genotypes submission:0

  Validation Summary: back to top
Validation status Marker displays
Mendelian segregation		 PCR results confirmed
in multiple reactions		 Homozygotes detected
in individual genotype data
byClusterbyFreqwithHapMapFreq UNKNOWN UNKNOWN UNKNOWN

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Revised: May 25, 2006 1:38 PM .