Reference SNP(refSNP) Cluster Report: rs6496589

Reference SNP(refSNP) Cluster Report: rs6496589

RefSNP
Organism:	human (Homo sapiens)
Molecule Type:	Genomic
Created/Updated in build:	116/130
Map to Genome Build:	36.3
Citation:	PubMed

Allele
Variation Class:	SNP: single nucleotide polymorphism
RefSNP Alleles:	C/G
Ancestral Allele:	G
Clinical Association:	unknown

HGVS Names
NM_002666.3:c.580G>C
NP_002657.2:p.Ala194Pro
NT_010274.16:g.5178756G>C

Links

, Linkout

SNP Details are organized in the following sections:

Submitter records for this RefSNP Cluster

The submission ss40560937 has the longest flanking sequence of all cluster members and was used to instantiate sequence for rs6496589 during BLAST analysis for the current build.

NCBI Assay ID	Handle\|Submitter ID	ss to rs Orientation /Strand	Alleles	5' Near Seq 30 bp	3' Near Seq 30 bp	Entry Date	Update Date	Build Added	Molecule Type	Success Rate
ss10777547	BCM_SSAHASNP\|chr15.NT_010274.15_5178756	fwd/B	C/G	aatggcaggtacctgactcttccttgtctg	agggaggaggtactccaccaccttctcaat	06/30/03	10/10/03	116	Genomic	unknown
ss12321783	WI_SSAHASNP\|chr15.NT_010274.15_5178756	fwd/B	C/G	aatggcaggtacctgactcttccttgtctg	agggaggaggtactccaccaccttctcaat	07/04/03	10/10/03	116	Genomic	unknown
ss12535051	GBELL\|UCSNP-531	rev/T	C/G	attgagaaggtggtggagtacctcctccct	cagacaaggaagagtcaggtacctgccatt	07/07/03	10/10/03	117	Genomic	unknown
ss19314724	CSHL-HAPMAP\|CSHL-HuDD-200402.chr15.NT_010274.15_5178756	fwd/B	C/G	aatggcaggtacctgactcttccttgtctg	agggaggaggtactccaccaccttctcaat	02/20/04	03/04/04	120	Genomic	unknown
ss21255107	SSAHASNP\|WGSA-200403-chr15.chr15.NT_010274.15_5178756	fwd/B	C/G	aatggcaggtacctgactcttccttgtctg	agggaggaggtactccaccaccttctcaat	03/19/04	03/19/04	121	Genomic	unknown
ss28498328	MGC_GENOME_DIFF\|29802090-G5178756C	fwd/B	C/G	aatggcaggtacctgactcttccttgtctg	agggaggaggtactccaccaccttctcaat	08/20/04	08/20/04	126	cDNA	unknown
ss28501643	IMCJ-GDT\|IMCJ-PLIN_7-CG	rev/T	C/G	attgagaaggtggtggagtacctcctccct	cagacaaggaagagtcaggtacctgccatt	08/20/04	08/20/04	126	Genomic	unknown
ss28513226	MGC_GENOME_DIFF\|BC031084x29802090-G5178756C	fwd/B	C/G	aatggcaggtacctgactcttccttgtctg	agggaggaggtactccaccaccttctcaat	08/25/04	08/25/04	126	cDNA	unknown
ss40560937	ABI\|hCV30373512	fwd/	C/G	aatggcaggtacctgactcttccttgtctg	agggaggaggtactccaccaccttctcaat	07/17/05	11/02/06	126	Genomic	unknown
ss69184497	PERLEGEN\|PGP04439110	fwd/	C/G	aatggcaggtacctgactcttccttgtctg	agggaggaggtactccaccaccttctcaat	01/30/07	03/31/08	127	Genomic	unknown
ss74873112	ILLUMINA\|ILMN_Human_1M_rs6496589	fwd/	C/G	aatggcaggtacctgactcttccttgtctg	agggaggaggtactccaccaccttctcaat	08/28/07	08/29/07	129	Genomic	unknown
ss85148250	HGSV\|Cor19240_SNV_20070510.chr15_88014233	fwd/	C/G	aatggcaggtacctgactcttccttgtctg	agggaggaggtactccaccaccttctcaat	11/30/07	12/08/07	130	Genomic	unknown
ss90247517	BCMHGSC_JDW\|JWB-0891930	fwd/	C/G	aatggcaggtacctgactcttccttgtctg	agggaggaggtactccaccaccttctcaat	02/26/08	02/29/08	129	Genomic	unknown
ss96778342	HUMANGENOME_JCVI\|1103645680498	fwd/	C/G	aatggcaggtacctgactcttccttgtctg	agggaggaggtactccaccaccttctcaat	03/27/08	03/27/08	130	Genomic	unknown
ss106447191	BGI\|BGI_rs6496589	fwd/	C/G	aatggcaggtacctgactcttccttgtctg	agggaggaggtactccaccaccttctcaat	09/15/08	06/18/09	130	Genomic	unknown
ss109024638	1000GENOMES\|CEU.trio.12.15.2008_3215030_chr15_88014233	fwd/	C/G	aatggcaggtacctgactcttccttgtctg	agggaggaggtactccaccaccttctcaat	12/15/08	12/16/08	130	Genomic	unknown
ss114526357	1000GENOMES\|NA19240_2008_12_16_2883644_chr15_88014233	fwd/	C/G	aatggcaggtacctgactcttccttgtctg	agggaggaggtactccaccaccttctcaat	12/18/08	12/18/08	130	Genomic	unknown
ss118322467	ILLUMINA-UK\|NA18507_000083567_NCBI36.1_chr15_88014233	fwd/	C/G	aatggcaggtacctgactcttccttgtctg	agggaggaggtactccaccaccttctcaat	01/20/09	01/21/09	130	Genomic	99 %

Fasta sequence (Legend)

 AGAGAAAACA GGTCAGAGAG GGGCCGGAGA GATCTGGGTC ATGTCTAGGA CTGGAAAGTA
 GGTGTTCTAG GTCCACCACA AACTCACTGG TGAGTTCCAC AACTCACTTT CCCTCTTTAC
 AGATGGGGTG GGGGTGGGGG GGGTAAATGA TTATGAATCC ATCTGAAAAT CCCACTGGCC
 TTCCCTATTC CAGAGCAGTG GCTGGATGAG CCACCTCCTG CTGATTCCCA GGCAGTGTGT
 GTGACAACTC ACTCCCAGGC CGAGCCTCCG AATGGCAGGT ACCTGACTCT TCCTTGTCTG
 S
 AGGGAGGAGG TACTCCACCA CCTTCTCAAT GCTGCCCAAG GCCAAGTCGG CCCCTCCAGA
 AGCCAGTCGG CCAGCTCGAG TGTTGGCAGC AAATTCCGCA GTGTCTCTGG CCACCCCCCA
 GGCAAGCTCG CACCCGGCCA AAGCGGCCCC CAGGACCTTG TCTGAAGTGC TCGCGATGGG
 AACGCTGATG CTGTTTCTGG CACTGCGGAG GCGGGTGGAG ATGGTGTCCT TCAGCTCAGA
 AGCAATCTGG GGGAAGTTGG TGGGGGTGTT AGGCATGTGG TCTTGCAGGC CCTACAAGGG

GeneView

GeneView via analysis of contig annotation:

View more variation on this gene (click to hide).

Assembly	SNP to Chr	Chr	Chr position	Contig	Contig position	Allele

Function	mRNA				Protein
Function	mRNA to Chr	Accession	Position	Allele change	Accession	Position	Residue change

GeneView via analysis of contig annotation: N/A.

GeneView via direct blast against RefSeq sequences (used when no gene model is available):

Function	Chr	mRNA				Protein
Function	Chr	SNP to mRNA	Accession	Position	Allele change	Accession	Position	Residue change

GeneView via direct blast against RefSeq sequences (used when no gene model is available): N/A

Integrated Maps:

Genome Build	Chr	Chr Pos	Contig	Contig Pos	SNP to Chr	Contig allele	Group term	Group label	Contig label	Neighbor SNP	Map Method

doesn't map to any assembly.

NCBI Resource Links

Resource

Submitter-Referenced
GenBank
NT_010274 ABBA01053019 BC031084

dbSNP Blast Analysis

UniGene Cluster ID
103253

Population Diversity

	Sample Ascertainment				Genotype Detail				Alleles
ss#	Population	Individual Group	Chrom. Sample Cnt.	Source	C/C	C/G	G/G	HWP	C	G
ss40560937	HapMap-CEU	European	120	IG	1.000				1.000

	HapMap-HCB	Asian	90	IG	0.711	0.289		0.273	0.856	0.144

	HapMap-JPT	Asian	88	IG	0.500	0.409	0.091	1.000	0.705	0.295

	HapMap-YRI	Sub-Saharan African	120	IG	0.967	0.033		1.000	0.983	0.017

	12		385	AF					0.986	0.014

ss69184497	HapMap-CEU	European	120	GF		1.000			0.500	0.500

	HapMap-HCB	Asian	90	GF		1.000			0.500	0.500

	HapMap-JPT	Asian	90	GF		1.000			0.500	0.500

	HapMap-YRI	Sub-Saharan African	120	GF		1.000			0.500	0.500

Concordant Genotype	Total Sample	C/C	C/G	G/G
ss40560937	289		33
ss96778342	1	1

RefSNP Genotype Summary	Total Individual	C/C	C/G	G/G
rs6496589	526	1	33

Discordant Genotypes:
Indiviudal SampleID	SubSNP(ss)	Genotype	Population Handle	Submitter Population	Submitter SampleID	SampleID Alias	Submission Batch	NCBI ProbeID
150	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA10846	CEPH1334.01	r27_ch15_CEU_bcm:genotype_0002
151	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA10847	CEPH1334.02	r27_ch15_CEU_bcm:genotype_0002
157	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA12144	CEPH1334.10	r27_ch15_CEU_bcm:genotype_0002
158	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA12145	CEPH1334.11	r27_ch15_CEU_bcm:genotype_0002
159	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA12146	CEPH1334.12	r27_ch15_CEU_bcm:genotype_0002
160	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA12239	CEPH1334.13	r27_ch15_CEU_bcm:genotype_0002
161	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA07029	CEPH1340.01	r27_ch15_CEU_bcm:genotype_0002
162	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA07019	CEPH1340.02	r27_ch15_CEU_bcm:genotype_0002
169	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA06994	CEPH1340.09	r27_ch15_CEU_bcm:genotype_0002
170	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA07000	CEPH1340.10	r27_ch15_CEU_bcm:genotype_0002
171	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA07022	CEPH1340.11	r27_ch15_CEU_bcm:genotype_0002
172	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA07056	CEPH1340.12	r27_ch15_CEU_bcm:genotype_0002
174	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA07048	CEPH1341.01	r27_ch15_CEU_bcm:genotype_0002
175	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA06991	CEPH1341.02	r27_ch15_CEU_bcm:genotype_0002
184	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA07034	CEPH1341.11	r27_ch15_CEU_bcm:genotype_0002
185	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA07055	CEPH1341.12	r27_ch15_CEU_bcm:genotype_0002
186	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA06993	CEPH1341.13	r27_ch15_CEU_bcm:genotype_0002
187	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA06985	CEPH1341.14	r27_ch15_CEU_bcm:genotype_0002
188	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA10851	CEPH1344.01	r27_ch15_CEU_bcm:genotype_0002
199	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA12056	CEPH1344.12	r27_ch15_CEU_bcm:genotype_0002
200	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA12057	CEPH1344.13	r27_ch15_CEU_bcm:genotype_0002
203	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA07348	CEPH1345.02	r27_ch15_CEU_bcm:genotype_0002
213	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA07357	CEPH1345.12	r27_ch15_CEU_bcm:genotype_0002
214	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA07345	CEPH1345.13	r27_ch15_CEU_bcm:genotype_0002
215	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA10857	CEPH1346.01	r27_ch15_CEU_bcm:genotype_0002
225	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA12043	CEPH1346.11	r27_ch15_CEU_bcm:genotype_0002
226	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA12044	CEPH1346.12	r27_ch15_CEU_bcm:genotype_0002
229	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA10859	CEPH1347.02	r27_ch15_CEU_bcm:genotype_0002
238	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA11881	CEPH1347.14	r27_ch15_CEU_bcm:genotype_0002
239	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA11882	CEPH1347.15	r27_ch15_CEU_bcm:genotype_0002
242	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA10854	CEPH1349.02	r27_ch15_CEU_bcm:genotype_0002
252	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA11839	CEPH1349.13	r27_ch15_CEU_bcm:genotype_0002
253	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA11840	CEPH1349.14	r27_ch15_CEU_bcm:genotype_0002
254	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA10856	CEPH1350.01	r27_ch15_CEU_bcm:genotype_0002
255	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA10855	CEPH1350.02	r27_ch15_CEU_bcm:genotype_0002
262	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA11829	CEPH1350.10	r27_ch15_CEU_bcm:genotype_0002
263	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA11830	CEPH1350.11	r27_ch15_CEU_bcm:genotype_0002
264	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA11831	CEPH1350.12	r27_ch15_CEU_bcm:genotype_0002
265	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA11832	CEPH1350.13	r27_ch15_CEU_bcm:genotype_0002
335	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA12707	CEPH1358.01	r27_ch15_CEU_bcm:genotype_0002
344	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA12716	CEPH1358.11	r27_ch15_CEU_bcm:genotype_0002
345	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA12717	CEPH1358.12	r27_ch15_CEU_bcm:genotype_0002
348	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA10860	CEPH1362.01	r27_ch15_CEU_bcm:genotype_0002
349	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA10861	CEPH1362.02	r27_ch15_CEU_bcm:genotype_0002
360	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA11992	CEPH1362.13	r27_ch15_CEU_bcm:genotype_0002
361	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA11993	CEPH1362.14	r27_ch15_CEU_bcm:genotype_0002
362	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA11994	CEPH1362.15	r27_ch15_CEU_bcm:genotype_0002
363	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA11995	CEPH1362.16	r27_ch15_CEU_bcm:genotype_0002
366	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA10863	CEPH1375.02	r27_ch15_CEU_bcm:genotype_0002
373	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA12264	CEPH1375.11	r27_ch15_CEU_bcm:genotype_0002
374	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA12234	CEPH1375.12	r27_ch15_CEU_bcm:genotype_0002
399	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA10830	CEPH1408.01	r27_ch15_CEU_bcm:genotype_0002
400	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA10831	CEPH1408.02	r27_ch15_CEU_bcm:genotype_0002
408	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA12154	CEPH1408.10	r27_ch15_CEU_bcm:genotype_0002
409	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA12236	CEPH1408.11	r27_ch15_CEU_bcm:genotype_0002
410	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA12155	CEPH1408.12	r27_ch15_CEU_bcm:genotype_0002
411	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA12156	CEPH1408.13	r27_ch15_CEU_bcm:genotype_0002
429	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA10835	CEPH1416.01	r27_ch15_CEU_bcm:genotype_0002
438	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA12248	CEPH1416.11	r27_ch15_CEU_bcm:genotype_0002
439	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA12249	CEPH1416.12	r27_ch15_CEU_bcm:genotype_0002
456	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA10838	CEPH1420.01	r27_ch15_CEU_bcm:genotype_0002
457	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA10839	CEPH1420.02	r27_ch15_CEU_bcm:genotype_0002
464	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA12003	CEPH1420.09	r27_ch15_CEU_bcm:genotype_0002
465	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA12004	CEPH1420.10	r27_ch15_CEU_bcm:genotype_0002
466	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA12005	CEPH1420.11	r27_ch15_CEU_bcm:genotype_0002
467	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA12006	CEPH1420.12	r27_ch15_CEU_bcm:genotype_0002
524	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA12740	CEPH1444.02	r27_ch15_CEU_bcm:genotype_0002
535	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA12750	CEPH1444.13	r27_ch15_CEU_bcm:genotype_0002
536	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA12751	CEPH1444.14	r27_ch15_CEU_bcm:genotype_0002
537	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA12752	CEPH1447.01	r27_ch15_CEU_bcm:genotype_0002
538	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA12753	CEPH1447.02	r27_ch15_CEU_bcm:genotype_0002
545	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA12760	CEPH1447.09	r27_ch15_CEU_bcm:genotype_0002
546	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA12761	CEPH1447.10	r27_ch15_CEU_bcm:genotype_0002
547	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA12762	CEPH1447.11	r27_ch15_CEU_bcm:genotype_0002
548	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA12763	CEPH1447.12	r27_ch15_CEU_bcm:genotype_0002
565	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA12801	CEPH1454.01	r27_ch15_CEU_bcm:genotype_0002
566	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA12802	CEPH1454.02	r27_ch15_CEU_bcm:genotype_0002
576	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA12812	CEPH1454.12	r27_ch15_CEU_bcm:genotype_0002
577	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA12813	CEPH1454.13	r27_ch15_CEU_bcm:genotype_0002
578	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA12814	CEPH1454.14	r27_ch15_CEU_bcm:genotype_0002
579	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA12815	CEPH1454.15	r27_ch15_CEU_bcm:genotype_0002
610	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA12864	CEPH1459.01	r27_ch15_CEU_bcm:genotype_0002
611	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA12865	CEPH1459.02	r27_ch15_CEU_bcm:genotype_0002
618	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA12872	CEPH1459.09	r27_ch15_CEU_bcm:genotype_0002
619	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA12873	CEPH1459.10	r27_ch15_CEU_bcm:genotype_0002
620	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA12874	CEPH1459.11	r27_ch15_CEU_bcm:genotype_0002
621	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA12875	CEPH1459.12	r27_ch15_CEU_bcm:genotype_0002
623	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA12878	CEPH1463.02	r27_ch15_CEU_bcm:genotype_0002
636	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA12891	CEPH1463.15	r27_ch15_CEU_bcm:genotype_0002
637	ss40560937	C/C	CSHL-HAPMAP	HapMap-CEU	NA12892	CEPH1463.16	r27_ch15_CEU_bcm:genotype_0002
5132	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA18500	YOR004.01	r27_ch15_YRI_bcm:genotype_0002
5133	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA18502	YOR004.02	r27_ch15_YRI_bcm:genotype_0002
5134	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA19127	YOR077.02	r27_ch15_YRI_bcm:genotype_0002
5135	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA19128	YOR077.03	r27_ch15_YRI_bcm:genotype_0002
5136	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA19132	YOR101.01	r27_ch15_YRI_bcm:genotype_0002
5137	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA19131	YOR101.02	r27_ch15_YRI_bcm:genotype_0002
5138	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA19130	YOR101.03	r27_ch15_YRI_bcm:genotype_0002
5139	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA19100	YOR105.01	r27_ch15_YRI_bcm:genotype_0002
5140	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA19099	YOR105.02	r27_ch15_YRI_bcm:genotype_0002
5141	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA19098	YOR105.03	r27_ch15_YRI_bcm:genotype_0002
5142	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA19194	YOR112.01	r27_ch15_YRI_bcm:genotype_0002
5143	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA19193	YOR112.02	r27_ch15_YRI_bcm:genotype_0002
5144	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA19192	YOR112.03	r27_ch15_YRI_bcm:genotype_0002
5145	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA19240	YOR117.01	r27_ch15_YRI_bcm:genotype_0002
5146	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA19238	YOR117.02	r27_ch15_YRI_bcm:genotype_0002
5147	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA19239	YOR117.03	r27_ch15_YRI_bcm:genotype_0002
5148	ss40560937	C/C	CSHL-HAPMAP	HapMap-HCB	NA18526	CH18526	r27_ch15_CHB_bcm:genotype_0002
5149	ss40560937	C/C	CSHL-HAPMAP	HapMap-HCB	NA18524	CH18524	r27_ch15_CHB_bcm:genotype_0002
5151	ss40560937	C/C	CSHL-HAPMAP	HapMap-HCB	NA18558	CH18558	r27_ch15_CHB_bcm:genotype_0002
5152	ss40560937	C/C	CSHL-HAPMAP	HapMap-HCB	NA18532	CH18532	r27_ch15_CHB_bcm:genotype_0002
5153	ss40560937	C/C	CSHL-HAPMAP	HapMap-HCB	NA18561	CH18561	r27_ch15_CHB_bcm:genotype_0002
5155	ss40560937	C/C	CSHL-HAPMAP	HapMap-HCB	NA18537	CH18537	r27_ch15_CHB_bcm:genotype_0002
5156	ss40560937	C/C	CSHL-HAPMAP	HapMap-HCB	NA18603	CH18603	r27_ch15_CHB_bcm:genotype_0002
5158	ss40560937	C/C	CSHL-HAPMAP	HapMap-HCB	NA18605	CH18605	r27_ch15_CHB_bcm:genotype_0002
5159	ss40560937	C/C	CSHL-HAPMAP	HapMap-HCB	NA18542	CH18542	r27_ch15_CHB_bcm:genotype_0002
5160	ss40560937	C/C	CSHL-HAPMAP	HapMap-HCB	NA18545	CH18545	r27_ch15_CHB_bcm:genotype_0002
5161	ss40560937	C/C	CSHL-HAPMAP	HapMap-HCB	NA18572	CH18572	r27_ch15_CHB_bcm:genotype_0002
5162	ss40560937	C/C	CSHL-HAPMAP	HapMap-HCB	NA18547	CH18547	r27_ch15_CHB_bcm:genotype_0002
5163	ss40560937	C/C	CSHL-HAPMAP	HapMap-HCB	NA18609	CH18609	r27_ch15_CHB_bcm:genotype_0002
5164	ss40560937	C/C	CSHL-HAPMAP	HapMap-HCB	NA18550	CH18550	r27_ch15_CHB_bcm:genotype_0002
5166	ss40560937	C/C	CSHL-HAPMAP	HapMap-HCB	NA18552	CH18552	r27_ch15_CHB_bcm:genotype_0002
5168	ss40560937	C/C	CSHL-HAPMAP	HapMap-HCB	NA18555	CH18555	r27_ch15_CHB_bcm:genotype_0002
5169	ss40560937	C/C	CSHL-HAPMAP	HapMap-HCB	NA18564	CH18564	r27_ch15_CHB_bcm:genotype_0002
5175	ss40560937	C/C	CSHL-HAPMAP	HapMap-HCB	NA18620	CH18620	r27_ch15_CHB_bcm:genotype_0002
5176	ss40560937	C/C	CSHL-HAPMAP	HapMap-HCB	NA18621	CH18621	r27_ch15_CHB_bcm:genotype_0002
5178	ss40560937	C/C	CSHL-HAPMAP	HapMap-HCB	NA18622	CH18622	r27_ch15_CHB_bcm:genotype_0002
5179	ss40560937	C/C	CSHL-HAPMAP	HapMap-HCB	NA18573	CH18573	r27_ch15_CHB_bcm:genotype_0002
5181	ss40560937	C/C	CSHL-HAPMAP	HapMap-HCB	NA18576	CH18576	r27_ch15_CHB_bcm:genotype_0002
5182	ss40560937	C/C	CSHL-HAPMAP	HapMap-HCB	NA18577	CH18577	r27_ch15_CHB_bcm:genotype_0002
5183	ss40560937	C/C	CSHL-HAPMAP	HapMap-HCB	NA18624	CH18624	r27_ch15_CHB_bcm:genotype_0002
5184	ss40560937	C/C	CSHL-HAPMAP	HapMap-HCB	NA18579	CH18579	r27_ch15_CHB_bcm:genotype_0002
5185	ss40560937	C/C	CSHL-HAPMAP	HapMap-HCB	NA18632	CH18632	r27_ch15_CHB_bcm:genotype_0002
5186	ss40560937	C/C	CSHL-HAPMAP	HapMap-HCB	NA18582	CH18582	r27_ch15_CHB_bcm:genotype_0002
5187	ss40560937	C/C	CSHL-HAPMAP	HapMap-HCB	NA18633	CH18633	r27_ch15_CHB_bcm:genotype_0002
5188	ss40560937	C/C	CSHL-HAPMAP	HapMap-HCB	NA18635	CH18635	r27_ch15_CHB_bcm:genotype_0002
5189	ss40560937	C/C	CSHL-HAPMAP	HapMap-HCB	NA18592	CH18592	r27_ch15_CHB_bcm:genotype_0002
5190	ss40560937	C/C	CSHL-HAPMAP	HapMap-HCB	NA18636	CH18636	r27_ch15_CHB_bcm:genotype_0002
5191	ss40560937	C/C	CSHL-HAPMAP	HapMap-HCB	NA18593	CH18593	r27_ch15_CHB_bcm:genotype_0002
5193	ss40560937	C/C	CSHL-HAPMAP	HapMap-JPT	NA18942	JA18942	r27_ch15_JPT_bcm:genotype_0002
5195	ss40560937	C/C	CSHL-HAPMAP	HapMap-JPT	NA18951	JA18951	r27_ch15_JPT_bcm:genotype_0002
5196	ss40560937	C/C	CSHL-HAPMAP	HapMap-JPT	NA18943	JA18943	r27_ch15_JPT_bcm:genotype_0002
5197	ss40560937	C/C	CSHL-HAPMAP	HapMap-JPT	NA18947	JA18947	r27_ch15_JPT_bcm:genotype_0002
5199	ss40560937	C/C	CSHL-HAPMAP	HapMap-JPT	NA18945	JA18945	r27_ch15_JPT_bcm:genotype_0002
5200	ss40560937	C/C	CSHL-HAPMAP	HapMap-JPT	NA18949	JA18949	r27_ch15_JPT_bcm:genotype_0002
5201	ss40560937	C/C	CSHL-HAPMAP	HapMap-JPT	NA18948	JA18948	r27_ch15_JPT_bcm:genotype_0002
5203	ss40560937	C/C	CSHL-HAPMAP	HapMap-JPT	NA18956	JA18956	r27_ch15_JPT_bcm:genotype_0002
5205	ss40560937	C/C	CSHL-HAPMAP	HapMap-JPT	NA18953	JA18953	r27_ch15_JPT_bcm:genotype_0002
5206	ss40560937	C/C	CSHL-HAPMAP	HapMap-JPT	NA18968	JA18968	r27_ch15_JPT_bcm:genotype_0002
5207	ss40560937	C/C	CSHL-HAPMAP	HapMap-JPT	NA18959	JA18959	r27_ch15_JPT_bcm:genotype_0002
5208	ss40560937	C/C	CSHL-HAPMAP	HapMap-JPT	NA18969	JA18969	r27_ch15_JPT_bcm:genotype_0002
5209	ss40560937	C/C	CSHL-HAPMAP	HapMap-JPT	NA18960	JA18960	r27_ch15_JPT_bcm:genotype_0002
5210	ss40560937	G/G	CSHL-HAPMAP	HapMap-JPT	NA18961	JA18961	r27_ch15_JPT_bcm:genotype_0002
5211	ss40560937	G/G	CSHL-HAPMAP	HapMap-JPT	NA18972	JA18972	r27_ch15_JPT_bcm:genotype_0002
5212	ss40560937	C/C	CSHL-HAPMAP	HapMap-JPT	NA18965	JA18965	r27_ch15_JPT_bcm:genotype_0002
5213	ss40560937	C/C	CSHL-HAPMAP	HapMap-JPT	NA18973	JA18973	r27_ch15_JPT_bcm:genotype_0002
5214	ss40560937	C/C	CSHL-HAPMAP	HapMap-JPT	NA18966	JA18966	r27_ch15_JPT_bcm:genotype_0002
5218	ss40560937	G/G	CSHL-HAPMAP	HapMap-JPT	NA18978	JA18978	r27_ch15_JPT_bcm:genotype_0002
5219	ss40560937	C/C	CSHL-HAPMAP	HapMap-JPT	NA18970	JA18970	r27_ch15_JPT_bcm:genotype_0002
5221	ss40560937	C/C	CSHL-HAPMAP	HapMap-JPT	NA18995	JA18995	r27_ch15_JPT_bcm:genotype_0002
5222	ss40560937	C/C	CSHL-HAPMAP	HapMap-JPT	NA18981	JA18981	r27_ch15_JPT_bcm:genotype_0002
5223	ss40560937	C/C	CSHL-HAPMAP	HapMap-JPT	NA18971	JA18971	r27_ch15_JPT_bcm:genotype_0002
5232	ss40560937	C/C	CSHL-HAPMAP	HapMap-JPT	NA19000	JA19000	r27_ch15_JPT_bcm:genotype_0002
5235	ss40560937	C/C	CSHL-HAPMAP	HapMap-JPT	NA19007	JA19007	r27_ch15_JPT_bcm:genotype_0002
5236	ss40560937	G/G	CSHL-HAPMAP	HapMap-JPT	NA19003	JA19003	r27_ch15_JPT_bcm:genotype_0002
5237	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA18501	YOR004.03	r27_ch15_YRI_bcm:genotype_0002
5238	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA18503	YOR005.01	r27_ch15_YRI_bcm:genotype_0002
5239	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA18505	YOR005.02	r27_ch15_YRI_bcm:genotype_0002
5240	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA18504	YOR005.03	r27_ch15_YRI_bcm:genotype_0002
5241	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA18506	YOR009.01	r27_ch15_YRI_bcm:genotype_0002
5242	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA18508	YOR009.02	r27_ch15_YRI_bcm:genotype_0002
5243	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA18507	YOR009.03	r27_ch15_YRI_bcm:genotype_0002
5244	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA18860	YOR012.01	r27_ch15_YRI_bcm:genotype_0002
5245	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA18858	YOR012.02	r27_ch15_YRI_bcm:genotype_0002
5246	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA18859	YOR012.03	r27_ch15_YRI_bcm:genotype_0002
5247	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA18515	YOR013.01	r27_ch15_YRI_bcm:genotype_0002
5248	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA18517	YOR013.02	r27_ch15_YRI_bcm:genotype_0002
5249	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA18516	YOR013.03	r27_ch15_YRI_bcm:genotype_0002
5250	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA18521	YOR016.01	r27_ch15_YRI_bcm:genotype_0002
5251	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA18523	YOR016.02	r27_ch15_YRI_bcm:genotype_0002
5252	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA18522	YOR016.03	r27_ch15_YRI_bcm:genotype_0002
5253	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA18872	YOR017.01	r27_ch15_YRI_bcm:genotype_0002
5254	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA18870	YOR017.02	r27_ch15_YRI_bcm:genotype_0002
5255	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA18871	YOR017.03	r27_ch15_YRI_bcm:genotype_0002
5256	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA18854	YOR018.01	r27_ch15_YRI_bcm:genotype_0002
5257	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA18852	YOR018.02	r27_ch15_YRI_bcm:genotype_0002
5258	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA18853	YOR018.03	r27_ch15_YRI_bcm:genotype_0002
5259	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA18857	YOR023.01	r27_ch15_YRI_bcm:genotype_0002
5260	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA18855	YOR023.02	r27_ch15_YRI_bcm:genotype_0002
5261	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA18856	YOR023.03	r27_ch15_YRI_bcm:genotype_0002
5262	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA18863	YOR024.01	r27_ch15_YRI_bcm:genotype_0002
5263	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA18861	YOR024.02	r27_ch15_YRI_bcm:genotype_0002
5264	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA18862	YOR024.03	r27_ch15_YRI_bcm:genotype_0002
5265	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA18914	YOR028.01	r27_ch15_YRI_bcm:genotype_0002
5266	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA18912	YOR028.02	r27_ch15_YRI_bcm:genotype_0002
5267	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA18913	YOR028.03	r27_ch15_YRI_bcm:genotype_0002
5268	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA19094	YOR040.01	r27_ch15_YRI_bcm:genotype_0002
5269	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA19093	YOR040.02	r27_ch15_YRI_bcm:genotype_0002
5270	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA19092	YOR040.03	r27_ch15_YRI_bcm:genotype_0002
5271	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA19103	YOR042.01	r27_ch15_YRI_bcm:genotype_0002
5272	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA19102	YOR042.02	r27_ch15_YRI_bcm:genotype_0002
5273	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA19101	YOR042.03	r27_ch15_YRI_bcm:genotype_0002
5274	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA19139	YOR043.01	r27_ch15_YRI_bcm:genotype_0002
5276	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA19138	YOR043.03	r27_ch15_YRI_bcm:genotype_0002
5277	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA19202	YOR045.01	r27_ch15_YRI_bcm:genotype_0002
5278	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA19201	YOR045.02	r27_ch15_YRI_bcm:genotype_0002
5279	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA19200	YOR045.03	r27_ch15_YRI_bcm:genotype_0002
5280	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA19173	YOR047.01	r27_ch15_YRI_bcm:genotype_0002
5281	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA19172	YOR047.02	r27_ch15_YRI_bcm:genotype_0002
5282	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA19171	YOR047.03	r27_ch15_YRI_bcm:genotype_0002
5283	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA19205	YOR048.01	r27_ch15_YRI_bcm:genotype_0002
5284	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA19204	YOR048.02	r27_ch15_YRI_bcm:genotype_0002
5285	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA19203	YOR048.03	r27_ch15_YRI_bcm:genotype_0002
5286	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA19211	YOR050.01	r27_ch15_YRI_bcm:genotype_0002
5287	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA19209	YOR050.02	r27_ch15_YRI_bcm:genotype_0002
5288	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA19210	YOR050.03	r27_ch15_YRI_bcm:genotype_0002
5289	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA19208	YOR051.01	r27_ch15_YRI_bcm:genotype_0002
5290	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA19206	YOR051.02	r27_ch15_YRI_bcm:genotype_0002
5292	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA19161	YOR056.01	r27_ch15_YRI_bcm:genotype_0002
5293	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA19159	YOR056.02	r27_ch15_YRI_bcm:genotype_0002
5294	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA19160	YOR056.03	r27_ch15_YRI_bcm:genotype_0002
5295	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA19221	YOR058.01	r27_ch15_YRI_bcm:genotype_0002
5296	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA19222	YOR058.02	r27_ch15_YRI_bcm:genotype_0002
5297	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA19223	YOR058.03	r27_ch15_YRI_bcm:genotype_0002
5298	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA19120	YOR060.01	r27_ch15_YRI_bcm:genotype_0002
5299	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA19116	YOR060.02	r27_ch15_YRI_bcm:genotype_0002
5300	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA19119	YOR060.03	r27_ch15_YRI_bcm:genotype_0002
5301	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA19142	YOR071.01	r27_ch15_YRI_bcm:genotype_0002
5302	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA19140	YOR071.02	r27_ch15_YRI_bcm:genotype_0002
5303	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA19141	YOR071.03	r27_ch15_YRI_bcm:genotype_0002
5304	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA19154	YOR072.01	r27_ch15_YRI_bcm:genotype_0002
5305	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA19152	YOR072.02	r27_ch15_YRI_bcm:genotype_0002
5306	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA19153	YOR072.03	r27_ch15_YRI_bcm:genotype_0002
5307	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA19145	YOR074.01	r27_ch15_YRI_bcm:genotype_0002
5308	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA19143	YOR074.02	r27_ch15_YRI_bcm:genotype_0002
5309	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA19144	YOR074.03	r27_ch15_YRI_bcm:genotype_0002
5310	ss40560937	C/C	CSHL-HAPMAP	HapMap-YRI	NA19129	YOR077.01	r27_ch15_YRI_bcm:genotype_0002

Genotype data submitted for	526	samples from	526	individuals	Individual with multiple genotypes submission:	0

Validation Summary:

Validation status

Marker displays
Mendelian segregation

PCR results confirmed
in multiple reactions

Homozygotes detected
in individual genotype data

DoubleHit found by: BCM_SSAHASNP

UNKNOWN

Disclaimer Privacy statement

Revised: May 25, 2006 1:38 PM .