Reference SNP(refSNP) Cluster Report: rs6414624

Reference SNP(refSNP) Cluster Report: rs6414624

RefSNP
Organism:	human (Homo sapiens)
Molecule Type:	Genomic
Created/Updated in build:	116/130
Map to Genome Build:	36.3
Citation:	PubMed

Allele
Variation Class:	SNP: single nucleotide polymorphism
RefSNP Alleles:	C/T
Ancestral Allele:	T
Clinical Association:	unknown

HGVS Names
NG_008843.1:g.35589T>C
NM_153717.2:c.772T>C
NP_714928.1:p.Tyr258His
NT_006051.17:g.1830957T>C

Links

, Linkout

SNP Details are organized in the following sections:

Submitter records for this RefSNP Cluster

The submission ss76884051 has the longest flanking sequence of all cluster members and was used to instantiate sequence for rs6414624 during BLAST analysis for the current build.

NCBI Assay ID	Handle\|Submitter ID	ss to rs Orientation /Strand	Alleles	5' Near Seq 30 bp	3' Near Seq 30 bp	Entry Date	Update Date	Build Added	Molecule Type	Success Rate
ss10149845	BCM_SSAHASNP\|chr4.NT_006051.15_1791866	fwd/B	C/T	cttcctaaaaagaagtcagatgatgaacta	accagaagatcctttcaaaacaagaaaaag	06/27/03	10/10/03	116	Genomic	unknown
ss11236459	SC_JCM\|chr4.NT_006051.15_1791866	fwd/B	C/T	cttcctaaaaagaagtcagatgatgaacta	accagaagatcctttcaaaacaagaaaaag	07/03/03	10/10/03	116	Genomic	unknown
ss11658435	WI_SSAHASNP\|chr4.NT_006051.15_1791866	fwd/B	C/T	cttcctaaaaagaagtcagatgatgaacta	accagaagatcctttcaaaacaagaaaaag	07/03/03	10/10/03	116	Genomic	unknown
ss14609405	WI_SSAHASNP\|chr4.NT_006051.16_1830957	fwd/B	C/T	cttcctaaaaagaagtcagatgatgaacta	accagaagatcctttcaaaacaagaaaaag	11/05/03	11/22/03	119	Genomic	unknown
ss22207039	SSAHASNP\|WGSA-200403-chr4.chr4.NT_006051.16_1830957	fwd/B	C/T	cttcctaaaaagaagtcagatgatgaacta	accagaagatcctttcaaaacaagaaaaag	03/20/04	03/21/04	121	Genomic	unknown
ss44545837	ABI\|hCV3092950	fwd/B	C/T	cttcctaaaaagaagtcagatgatgaatta	accagaagatcctttcaaaacaagaaaaag	07/19/05	11/03/06	126	Genomic	unknown
ss66590616	ILLUMINA\|HumanHap300v1.1_rs6414624	fwd/T	C/T	cttcctaaaaagaagtcagatgatgaacta	accagaagatcctttcaaaacaagaaaaag	11/09/06	11/09/06	127	Genomic	unknown
ss67450788	ILLUMINA\|HumanHap550v1.1_rs6414624	fwd/B	C/T	cttcctaaaaagaagtcagatgatgaacta	accagaagatcctttcaaaacaagaaaaag	11/14/06	11/14/06	127	Genomic	unknown
ss67802467	ILLUMINA\|HumanHap650Yv1.0_rs6414624	fwd/B	C/T	cttcctaaaaagaagtcagatgatgaacta	accagaagatcctttcaaaacaagaaaaag	11/14/06	11/14/06	127	Genomic	unknown
ss68889100	PERLEGEN\|PGP04231765	fwd/B	C/T	cttcctaaaaagaagtcagatgatgaacta	accagaagatcctttcaaaacaagaaaaag	01/30/07	03/31/08	127	Genomic	unknown
ss70862505	ILLUMINA\|HumanHap550v3.0__rs6414624	rev/T	A/G	ctttttcttgttttgaaaggatcttctggt	taattcatcatctgacttctttttaggaag	04/20/07	03/31/08	130	Genomic	unknown
ss71449998	ILLUMINA\|HumanHap650Yv3.0_rs6414624	fwd/B	C/T	cttcctaaaaagaagtcagatgatgaatta	accagaagatcctttcaaaacaagaaaaag	04/23/07	04/23/07	127	Genomic	unknown
ss74959993	ILLUMINA\|ILMN_Human_1M_rs6414624	fwd/B	C/T	cttcctaaaaagaagtcagatgatgaatta	accagaagatcctttcaaaacaagaaaaag	08/28/07	08/29/07	129	Genomic	unknown
ss76884051	SI_EXO\|NT_006051.17_1830957	fwd/B	C/T	cttcctaaaaagaagtcagatgatgaacta	accagaagatcctttcaaaacaagaaaaag	09/20/07	09/20/07	129	Genomic	unknown
ss78447703	HGSV\|Cor12878_SNV_20070510.chr4_5861584	fwd/B	C/T	cttcctaaaaagaagtcagatgatgaacta	accagaagatcctttcaaaacaagaaaaag	10/17/07	10/19/07	129	Genomic	unknown
ss79219225	ILLUMINA\|HumanHap300v2.0_rs6414624	fwd/B	C/T	cttcctaaaaagaagtcagatgatgaatta	accagaagatcctttcaaaacaagaaaaag	04/18/07	11/18/07	130	Genomic	unknown
ss80176542	HGSV\|Cor18507_SNV_20070510.chr4_5861584	fwd/B	C/T	cttcctaaaaagaagtcagatgatgaacta	accagaagatcctttcaaaacaagaaaaag	11/23/07	11/24/07	130	Genomic	unknown
ss84471788	KRIBB_YJKIM\|KHS718843	fwd/B	C/T	cttcctaaaaagaagtcagatgatgaatta	accagaagatcctttcaaaacaagaaaaag	12/04/07	12/07/07	130	Genomic	unknown
ss92452273	BCMHGSC_JDW\|JWB-1729984	fwd/B	C/T	cttcctaaaaagaagtcagatgatgaacta	accagaagatcctttcaaaacaagaaaaag	02/26/08	03/03/08	129	Genomic	unknown
ss98797543	HUMANGENOME_JCVI\|1103654323967	fwd/B	C/T	cttcctaaaaagaagtcagatgatgaatta	accagaagatcctttcaaaacaagaaaaag	04/01/08	04/01/08	130	Genomic	unknown
ss105801744	BGI\|BGI_rs6414624	fwd/B	C/T	cttcctaaaaagaagtcagatgatgaatta	accagaagatcctttcaaaacaagaaaaag	09/12/08	06/17/09	130	Genomic	unknown
ss111712075	1000GENOMES\|NA19240_2008_12_16_816847_chr4_5794413	fwd/B	C/T	cttcctaaaaagaagtcagatgatgaacta	accagaagatcctttcaaaacaagaaaaag	12/16/08	12/17/08	130	Genomic	unknown
ss112873964	1000GENOMES\|CEU.trio.12.15.2008_904760_chr4_5794413	fwd/B	C/T	cttcctaaaaagaagtcagatgatgaacta	accagaagatcctttcaaaacaagaaaaag	12/15/08	12/18/08	130	Genomic	unknown

Fasta sequence (Legend)

 TGCTTTTTAT ATTTTCTTCA CACATGGAAA TGGGGGATGT GGAGGGCCTT GCACAGAGTA
 AGCACTCAAT ATTTGTTGAA TACATGCATG AGGAAGAAAG GAAGCTTTTT AAGGAAGCTT
 CATGAAAATG TAATGCATTA TGGGCCATTG TCATGATTTA TAATCGGAGT TCCTTTCCTT
 CAGCAAAAAA TATACGTGAA GAGAGGGTGA AAGAGAAGAA AAGAAGGAGA GAGGCAGTGG
 GGGAGGGAGG GAGAAGAGAA AACAGAAAGC AAAAGACAAA AATACCATTG ATTAAACTTT
 TCTTTTGTTA TCTTTCCTTT CTTGGCAATA GATGTTTATT CAGATTTTTA AAATGTGCCT
 CCTTGACCTT CTTCCTAAAA AGAAGTCAGA TGATGAACTA
 Y
 ACCAGAAGAT CCTTTCAAAA CAAGAAAAAG TAAGTCTTCA ACCTATGTTT CAAGGTAACT
 TAAAAATAGT TTATTATAAT ATATACAACT TATGATGCAA AAATTTTTTT CTTTCATGTA
 TAAAATAGCT TATTACAATA TATACTTTTC AACACAGTAT AGTGAAATAT AAAAGTATGT
 ATACAAATAT TTAAAAAGTG TATTATTAAA ATTTGGAATA CTATTTATAG CAAAGAGAAT
 AATATTGGTC ATATCTACTA CTCAAAGACG GTCACTGTTA ATGTTTTTTT CTGCACACAT
 TTGGGATATT TTTAAAGACA TAATTTGTTT ATTGGTTATA GCTATGTATA CTACTTTGTA
 TTCTATTCTC AGTCTTTTAT GGAAAGTTTA TTTTGTCTCA

GeneView

GeneView via analysis of contig annotation:

View more variation on this gene (click to hide).

Assembly	SNP to Chr	Chr	Chr position	Contig	Contig position	Allele

Function	mRNA				Protein
Function	mRNA to Chr	Accession	Position	Allele change	Accession	Position	Residue change

GeneView via analysis of contig annotation: N/A.

GeneView via direct blast against RefSeq sequences (used when no gene model is available):

Function	Chr	mRNA				Protein
Function	Chr	SNP to mRNA	Accession	Position	Allele change	Accession	Position	Residue change

GeneView via direct blast against RefSeq sequences (used when no gene model is available): N/A

Integrated Maps:

Genome Build	Chr	Chr Pos	Contig	Contig Pos	SNP to Chr	Contig allele	Group term	Group label	Contig label	Neighbor SNP	Map Method

doesn't map to any assembly.

NCBI Resource Links

Resource

Submitter-Referenced
GenBank
NT_006051.17 ABBA01008263

dbSNP Blast Analysis

UniGene Cluster ID
552571

Population Diversity

	Sample Ascertainment				Genotype Detail				Alleles
ss#	Population	Individual Group	Chrom. Sample Cnt.	Source	C/C	C/T	T/T	HWP	C	T
ss44545837	HapMap-CEU	European	120	IG	0.583	0.383	0.033	0.479	0.775	0.225

	HapMap-HCB	Asian	90	IG	0.822	0.178		0.527	0.911	0.089

	HapMap-JPT	Asian	88	IG	0.886	0.114		0.752	0.943	0.057

	HapMap-YRI	Sub-Saharan African	120	IG	0.283	0.517	0.200	1.000	0.542	0.458

ss68889100	HapMap-CEU	European	120	GF	0.817	0.183			0.908	0.092

	HapMap-HCB	Asian	90	GF	1.000				1.000

	HapMap-JPT	Asian	90	GF	1.000				1.000

	HapMap-YRI	Sub-Saharan African	120	GF	1.000				1.000

Concordant Genotype	Total Sample	C/C	C/T	T/T
ss76884051	1110	615	371	102
ss98797543	1	1

RefSNP Genotype Summary	Total Individual	C/C	C/T	T/T
rs6414624	1208	616	371	102

Discordant Genotypes:
Indiviudal SampleID	SubSNP(ss)	Genotype	Population Handle	Submitter Population	Submitter SampleID	SampleID Alias	Submission Batch	NCBI ProbeID
150	ss76884051	C/T	CSHL-HAPMAP	HapMap-CEU	NA10846	CEPH1334.01	r27_ch4_CEU_illumina:human_1m_beadchip
151	ss76884051	C/T	CSHL-HAPMAP	HapMap-CEU	NA10847	CEPH1334.02	r27_ch4_CEU_illumina:human_1m_beadchip
157	ss76884051	C/T	CSHL-HAPMAP	HapMap-CEU	NA12144	CEPH1334.10	r27_ch4_CEU_illumina:human_1m_beadchip
159	ss76884051	C/T	CSHL-HAPMAP	HapMap-CEU	NA12146	CEPH1334.12	r27_ch4_CEU_illumina:human_1m_beadchip
169	ss76884051	C/T	CSHL-HAPMAP	HapMap-CEU	NA06994	CEPH1340.09	r27_ch4_CEU_illumina:human_1m_beadchip
187	ss76884051	C/T	CSHL-HAPMAP	HapMap-CEU	NA06985	CEPH1341.14	r27_ch4_CEU_illumina:human_1m_beadchip
188	ss76884051	N/N	CSHL-HAPMAP	HapMap-CEU	NA10851	CEPH1344.01	r27_ch4_CEU_illumina:human_1m_beadchip
199	ss76884051	C/T	CSHL-HAPMAP	HapMap-CEU	NA12056	CEPH1344.12	r27_ch4_CEU_illumina:human_1m_beadchip
344	ss76884051	C/T	CSHL-HAPMAP	HapMap-CEU	NA12716	CEPH1358.11	r27_ch4_CEU_illumina:human_1m_beadchip
360	ss76884051	C/T	CSHL-HAPMAP	HapMap-CEU	NA11992	CEPH1362.13	r27_ch4_CEU_illumina:human_1m_beadchip
363	ss76884051	C/T	CSHL-HAPMAP	HapMap-CEU	NA11995	CEPH1362.16	r27_ch4_CEU_illumina:human_1m_beadchip
399	ss76884051	C/T	CSHL-HAPMAP	HapMap-CEU	NA10830	CEPH1408.01	r27_ch4_CEU_illumina:human_1m_beadchip
408	ss76884051	T/T	CSHL-HAPMAP	HapMap-CEU	NA12154	CEPH1408.10	r27_ch4_CEU_illumina:human_1m_beadchip
410	ss76884051	C/T	CSHL-HAPMAP	HapMap-CEU	NA12155	CEPH1408.12	r27_ch4_CEU_illumina:human_1m_beadchip
411	ss76884051	N/N	CSHL-HAPMAP	HapMap-CEU	NA12156	CEPH1408.13	r27_ch4_CEU_illumina:human_1m_beadchip
457	ss76884051	C/T	CSHL-HAPMAP	HapMap-CEU	NA10839	CEPH1420.02	r27_ch4_CEU_illumina:human_1m_beadchip
467	ss76884051	T/T	CSHL-HAPMAP	HapMap-CEU	NA12006	CEPH1420.12	r27_ch4_CEU_illumina:human_1m_beadchip
546	ss76884051	C/T	CSHL-HAPMAP	HapMap-CEU	NA12761	CEPH1447.10	r27_ch4_CEU_illumina:human_1m_beadchip
566	ss76884051	C/T	CSHL-HAPMAP	HapMap-CEU	NA12802	CEPH1454.02	r27_ch4_CEU_illumina:human_1m_beadchip
579	ss76884051	C/T	CSHL-HAPMAP	HapMap-CEU	NA12815	CEPH1454.15	r27_ch4_CEU_illumina:human_1m_beadchip
619	ss76884051	C/T	CSHL-HAPMAP	HapMap-CEU	NA12873	CEPH1459.10	r27_ch4_CEU_illumina:human_1m_beadchip
5132	ss76884051	C/T	CSHL-HAPMAP	HapMap-YRI	NA18500	YOR004.01	r27_ch4_YRI_illumina:human_1m_beadchip
5134	ss76884051	C/T	CSHL-HAPMAP	HapMap-YRI	NA19127	YOR077.02	r27_ch4_YRI_illumina:human_1m_beadchip
5135	ss76884051	C/T	CSHL-HAPMAP	HapMap-YRI	NA19128	YOR077.03	r27_ch4_YRI_illumina:human_1m_beadchip
5136	ss76884051	C/T	CSHL-HAPMAP	HapMap-YRI	NA19132	YOR101.01	r27_ch4_YRI_illumina:human_1m_beadchip
5137	ss76884051	T/T	CSHL-HAPMAP	HapMap-YRI	NA19131	YOR101.02	r27_ch4_YRI_illumina:human_1m_beadchip
5138	ss76884051	C/T	CSHL-HAPMAP	HapMap-YRI	NA19130	YOR101.03	r27_ch4_YRI_illumina:human_1m_beadchip
5139	ss76884051	N/N	CSHL-HAPMAP	HapMap-YRI	NA19100	YOR105.01	r27_ch4_YRI_illumina:human_1m_beadchip
5140	ss76884051	T/T	CSHL-HAPMAP	HapMap-YRI	NA19099	YOR105.02	r27_ch4_YRI_illumina:human_1m_beadchip
5141	ss76884051	T/T	CSHL-HAPMAP	HapMap-YRI	NA19098	YOR105.03	r27_ch4_YRI_illumina:human_1m_beadchip
5142	ss76884051	C/T	CSHL-HAPMAP	HapMap-YRI	NA19194	YOR112.01	r27_ch4_YRI_illumina:human_1m_beadchip
5143	ss76884051	T/T	CSHL-HAPMAP	HapMap-YRI	NA19193	YOR112.02	r27_ch4_YRI_illumina:human_1m_beadchip
5145	ss76884051	C/T	CSHL-HAPMAP	HapMap-YRI	NA19240	YOR117.01	r27_ch4_YRI_illumina:human_1m_beadchip
5146	ss76884051	C/T	CSHL-HAPMAP	HapMap-YRI	NA19238	YOR117.02	r27_ch4_YRI_illumina:human_1m_beadchip
5147	ss76884051	C/T	CSHL-HAPMAP	HapMap-YRI	NA19239	YOR117.03	r27_ch4_YRI_illumina:human_1m_beadchip
5153	ss76884051	C/T	CSHL-HAPMAP	HapMap-HCB	NA18561	CH18561	r27_ch4_CHB_illumina:human_1m_beadchip
5159	ss76884051	C/T	CSHL-HAPMAP	HapMap-HCB	NA18542	CH18542	r27_ch4_CHB_illumina:human_1m_beadchip
5168	ss76884051	C/T	CSHL-HAPMAP	HapMap-HCB	NA18555	CH18555	r27_ch4_CHB_illumina:human_1m_beadchip
5175	ss76884051	C/T	CSHL-HAPMAP	HapMap-HCB	NA18620	CH18620	r27_ch4_CHB_illumina:human_1m_beadchip
5181	ss76884051	C/T	CSHL-HAPMAP	HapMap-HCB	NA18576	CH18576	r27_ch4_CHB_illumina:human_1m_beadchip
5186	ss76884051	C/T	CSHL-HAPMAP	HapMap-HCB	NA18582	CH18582	r27_ch4_CHB_illumina:human_1m_beadchip
5190	ss76884051	N/N	CSHL-HAPMAP	HapMap-HCB	NA18636	CH18636	r27_ch4_CHB_illumina:human_1m_beadchip
5192	ss76884051	C/T	CSHL-HAPMAP	HapMap-HCB	NA18637	CH18637	r27_ch4_CHB_illumina:human_1m_beadchip
5206	ss76884051	C/T	CSHL-HAPMAP	HapMap-JPT	NA18968	JA18968	r27_ch4_JPT_illumina:human_1m_beadchip
5210	ss76884051	C/T	CSHL-HAPMAP	HapMap-JPT	NA18961	JA18961	r27_ch4_JPT_illumina:human_1m_beadchip
5227	ss76884051	C/T	CSHL-HAPMAP	HapMap-JPT	NA18991	JA18991	r27_ch4_JPT_illumina:human_1m_beadchip
5231	ss76884051	C/T	CSHL-HAPMAP	HapMap-JPT	NA18998	JA18998	r27_ch4_JPT_illumina:human_1m_beadchip
5233	ss76884051	C/T	CSHL-HAPMAP	HapMap-JPT	NA19005	JA19005	r27_ch4_JPT_illumina:human_1m_beadchip
5237	ss76884051	T/T	CSHL-HAPMAP	HapMap-YRI	NA18501	YOR004.03	r27_ch4_YRI_illumina:human_1m_beadchip
5238	ss76884051	C/T	CSHL-HAPMAP	HapMap-YRI	NA18503	YOR005.01	r27_ch4_YRI_illumina:human_1m_beadchip
5240	ss76884051	T/T	CSHL-HAPMAP	HapMap-YRI	NA18504	YOR005.03	r27_ch4_YRI_illumina:human_1m_beadchip
5243	ss76884051	C/T	CSHL-HAPMAP	HapMap-YRI	NA18507	YOR009.03	r27_ch4_YRI_illumina:human_1m_beadchip
5247	ss76884051	C/T	CSHL-HAPMAP	HapMap-YRI	NA18515	YOR013.01	r27_ch4_YRI_illumina:human_1m_beadchip
5248	ss76884051	C/T	CSHL-HAPMAP	HapMap-YRI	NA18517	YOR013.02	r27_ch4_YRI_illumina:human_1m_beadchip
5250	ss76884051	N/N	CSHL-HAPMAP	HapMap-YRI	NA18521	YOR016.01	r27_ch4_YRI_illumina:human_1m_beadchip
5251	ss76884051	N/N	CSHL-HAPMAP	HapMap-YRI	NA18523	YOR016.02	r27_ch4_YRI_illumina:human_1m_beadchip
5252	ss76884051	N/N	CSHL-HAPMAP	HapMap-YRI	NA18522	YOR016.03	r27_ch4_YRI_illumina:human_1m_beadchip
5253	ss76884051	T/T	CSHL-HAPMAP	HapMap-YRI	NA18872	YOR017.01	r27_ch4_YRI_illumina:human_1m_beadchip
5254	ss76884051	C/T	CSHL-HAPMAP	HapMap-YRI	NA18870	YOR017.02	r27_ch4_YRI_illumina:human_1m_beadchip
5255	ss76884051	T/T	CSHL-HAPMAP	HapMap-YRI	NA18871	YOR017.03	r27_ch4_YRI_illumina:human_1m_beadchip
5256	ss76884051	C/T	CSHL-HAPMAP	HapMap-YRI	NA18854	YOR018.01	r27_ch4_YRI_illumina:human_1m_beadchip
5257	ss76884051	C/T	CSHL-HAPMAP	HapMap-YRI	NA18852	YOR018.02	r27_ch4_YRI_illumina:human_1m_beadchip
5258	ss76884051	T/T	CSHL-HAPMAP	HapMap-YRI	NA18853	YOR018.03	r27_ch4_YRI_illumina:human_1m_beadchip
5259	ss76884051	C/T	CSHL-HAPMAP	HapMap-YRI	NA18857	YOR023.01	r27_ch4_YRI_illumina:human_1m_beadchip
5261	ss76884051	N/N	CSHL-HAPMAP	HapMap-YRI	NA18856	YOR023.03	r27_ch4_YRI_illumina:human_1m_beadchip
5263	ss76884051	C/T	CSHL-HAPMAP	HapMap-YRI	NA18861	YOR024.02	r27_ch4_YRI_illumina:human_1m_beadchip
5265	ss76884051	C/T	CSHL-HAPMAP	HapMap-YRI	NA18914	YOR028.01	r27_ch4_YRI_illumina:human_1m_beadchip
5267	ss76884051	C/T	CSHL-HAPMAP	HapMap-YRI	NA18913	YOR028.03	r27_ch4_YRI_illumina:human_1m_beadchip
5270	ss76884051	N/N	CSHL-HAPMAP	HapMap-YRI	NA19092	YOR040.03	r27_ch4_YRI_illumina:human_1m_beadchip
5273	ss76884051	C/T	CSHL-HAPMAP	HapMap-YRI	NA19101	YOR042.03	r27_ch4_YRI_illumina:human_1m_beadchip
5276	ss76884051	C/T	CSHL-HAPMAP	HapMap-YRI	NA19138	YOR043.03	r27_ch4_YRI_illumina:human_1m_beadchip
5277	ss76884051	T/T	CSHL-HAPMAP	HapMap-YRI	NA19202	YOR045.01	r27_ch4_YRI_illumina:human_1m_beadchip
5278	ss76884051	C/T	CSHL-HAPMAP	HapMap-YRI	NA19201	YOR045.02	r27_ch4_YRI_illumina:human_1m_beadchip
5279	ss76884051	C/T	CSHL-HAPMAP	HapMap-YRI	NA19200	YOR045.03	r27_ch4_YRI_illumina:human_1m_beadchip
5280	ss76884051	C/T	CSHL-HAPMAP	HapMap-YRI	NA19173	YOR047.01	r27_ch4_YRI_illumina:human_1m_beadchip
5282	ss76884051	C/T	CSHL-HAPMAP	HapMap-YRI	NA19171	YOR047.03	r27_ch4_YRI_illumina:human_1m_beadchip
5284	ss76884051	C/T	CSHL-HAPMAP	HapMap-YRI	NA19204	YOR048.02	r27_ch4_YRI_illumina:human_1m_beadchip
5286	ss76884051	T/T	CSHL-HAPMAP	HapMap-YRI	NA19211	YOR050.01	r27_ch4_YRI_illumina:human_1m_beadchip
5287	ss76884051	C/T	CSHL-HAPMAP	HapMap-YRI	NA19209	YOR050.02	r27_ch4_YRI_illumina:human_1m_beadchip
5288	ss76884051	T/T	CSHL-HAPMAP	HapMap-YRI	NA19210	YOR050.03	r27_ch4_YRI_illumina:human_1m_beadchip
5289	ss76884051	T/T	CSHL-HAPMAP	HapMap-YRI	NA19208	YOR051.01	r27_ch4_YRI_illumina:human_1m_beadchip
5290	ss76884051	T/T	CSHL-HAPMAP	HapMap-YRI	NA19206	YOR051.02	r27_ch4_YRI_illumina:human_1m_beadchip
5291	ss76884051	C/T	CSHL-HAPMAP	HapMap-YRI	NA19207	YOR051.03	r27_ch4_YRI_illumina:human_1m_beadchip
5292	ss76884051	C/T	CSHL-HAPMAP	HapMap-YRI	NA19161	YOR056.01	r27_ch4_YRI_illumina:human_1m_beadchip
5293	ss76884051	C/T	CSHL-HAPMAP	HapMap-YRI	NA19159	YOR056.02	r27_ch4_YRI_illumina:human_1m_beadchip
5294	ss76884051	C/T	CSHL-HAPMAP	HapMap-YRI	NA19160	YOR056.03	r27_ch4_YRI_illumina:human_1m_beadchip
5295	ss76884051	C/T	CSHL-HAPMAP	HapMap-YRI	NA19221	YOR058.01	r27_ch4_YRI_illumina:human_1m_beadchip
5296	ss76884051	T/T	CSHL-HAPMAP	HapMap-YRI	NA19222	YOR058.02	r27_ch4_YRI_illumina:human_1m_beadchip
5299	ss76884051	C/T	CSHL-HAPMAP	HapMap-YRI	NA19116	YOR060.02	r27_ch4_YRI_illumina:human_1m_beadchip
5300	ss76884051	C/T	CSHL-HAPMAP	HapMap-YRI	NA19119	YOR060.03	r27_ch4_YRI_illumina:human_1m_beadchip
5302	ss76884051	C/T	CSHL-HAPMAP	HapMap-YRI	NA19140	YOR071.02	r27_ch4_YRI_illumina:human_1m_beadchip
5304	ss76884051	C/T	CSHL-HAPMAP	HapMap-YRI	NA19154	YOR072.01	r27_ch4_YRI_illumina:human_1m_beadchip
5305	ss76884051	C/T	CSHL-HAPMAP	HapMap-YRI	NA19152	YOR072.02	r27_ch4_YRI_illumina:human_1m_beadchip
5306	ss76884051	T/T	CSHL-HAPMAP	HapMap-YRI	NA19153	YOR072.03	r27_ch4_YRI_illumina:human_1m_beadchip
5308	ss76884051	C/T	CSHL-HAPMAP	HapMap-YRI	NA19143	YOR074.02	r27_ch4_YRI_illumina:human_1m_beadchip
5309	ss76884051	C/T	CSHL-HAPMAP	HapMap-YRI	NA19144	YOR074.03	r27_ch4_YRI_illumina:human_1m_beadchip
5310	ss76884051	C/T	CSHL-HAPMAP	HapMap-YRI	NA19129	YOR077.01	r27_ch4_YRI_illumina:human_1m_beadchip

Genotype data submitted for	1208	samples from	1208	individuals	Individual with multiple genotypes submission:	0

Validation Summary:

Validation status

Marker displays
Mendelian segregation

PCR results confirmed
in multiple reactions

Homozygotes detected
in individual genotype data

DoubleHit found by: BCM_SSAHASNP

UNKNOWN

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Revised: May 25, 2006 1:38 PM .