Reference SNP(refSNP) Cluster Report: rs3809530

Reference SNP(refSNP) Cluster Report: rs3809530

RefSNP
Organism:	human (Homo sapiens)
Molecule Type:	Genomic
Created/Updated in build:	107/130
Map to Genome Build:	36.3

Allele
Variation Class:	SNP: single nucleotide polymorphism
RefSNP Alleles:	C/T
Ancestral Allele:	C
Clinical Association:	unknown

HGVS Names
NM_004998.2:c.1531-1495G>C
NM_033195.1:c.40G>A
NP_149972.1:p.Val14Met
NT_010194.16:g.30289736G>A

Links

, Linkout

SNP Details are organized in the following sections:

Submitter records for this RefSNP Cluster

The submission ss40587383 has the longest flanking sequence of all cluster members and was used to instantiate sequence for rs3809530 during BLAST analysis for the current build.

NCBI Assay ID	Handle\|Submitter ID	ss to rs Orientation /Strand	Alleles	5' Near Seq 30 bp	3' Near Seq 30 bp	Entry Date	Update Date	Build Added	Molecule Type	Success Rate
ss4995931	YUSUKE\|IMS-JST169200	fwd/B	C/T	ggcataggaaattcgctcccaccgagctca	tctctggctggcccgcacaacaggcacagt	08/12/02	10/10/03	107	Genomic	unknown
ss6586706	WI_SSAHASNP\|NT_010194.13_14472065	rev/T	A/G	actgtgcctgttgtgcgggccagccagaga	tgagctcggtgggagcgaatttcctatgcc	02/12/03	10/10/03	111	Genomic	unknown
ss10802002	BCM_SSAHASNP\|chr15.NT_010194.15_30288790	rev/T	A/G	actgtgcctgttgtgcgggccagccagaga	tgagctcggtgggagcgaatttcctatgcc	06/30/03	10/10/03	116	Genomic	unknown
ss16253752	CGAP-GAI\|1507106	rev/T	A/G	actgtgcctgttgtgcgggccagccagaga	tgagctcggtgggagcgaatttcctatgcc	11/18/03	11/22/03	120	cDNA	unknown
ss16663685	CSHL-HAPMAP\|CSHL-HuAA-200402.chr15.NT_010194.16_30289736	rev/T	A/G	actgtgcctgttgtgcgggccagccagaga	tgagctcggtgggagcgaatttcctatgcc	02/17/04	03/04/04	120	Genomic	unknown
ss19311369	CSHL-HAPMAP\|CSHL-HuDD-200402.chr15.NT_010194.16_30289736	rev/T	A/G	actgtgcctgttgtgcgggccagccagaga	tgagctcggtgggagcgaatttcctatgcc	02/20/04	03/04/04	120	Genomic	unknown
ss21233372	SSAHASNP\|WGSA-200403-chr15.chr15.NT_010194.16_30289736	rev/T	A/G	actgtgcctgttgtgcgggccagccagaga	tgagctcggtgggagcgaatttcctatgcc	03/19/04	03/19/04	121	Genomic	unknown
ss28510955	MGC_GENOME_DIFF\|BC022034x37540936-G30289736A	rev/T	A/G	actgtgcctgttgtgcgggccagccagaga	tgagctcggtgggagcgaatttcctatgcc	08/25/04	08/25/04	126	cDNA	unknown
ss40587383	ABI\|hCV9972970	rev/T	A/G	actgtgcctgttgtgcgggccagccagaga	tgagctcggtgggagcgaatttcctatgcc	07/17/05	11/02/06	126	Genomic	unknown
ss48408294	APPLERA_GI\|hCV9972970	rev/T	A/G	actgtgcctgttgtgcgggccagccagaga	tgagctcggtgggagcgaatttcctatgcc	09/28/05	11/03/06	126	Genomic	unknown
ss65731499	ILLUMINA\|Human1-rs3809530	fwd/B	C/T	ggcataggaaattcgctcccaccgagctca	tctctggctggcccgcacaacaggcacagt	10/10/06	10/10/06	127	Genomic	unknown
ss69178053	PERLEGEN\|PGP04394184	rev/T	A/G	actgtgcctgttgtgcgggccagccagaga	tgagctcggtgggagcgaatttcctatgcc	01/30/07	01/30/07	127	Genomic	unknown
ss74806078	AFFY\|SNP_M-174265	fwd/B	C/T	ggcataggaaattcgctcccaccgagctca	tctctggctggcccgcacaacaggcacagt	08/09/07	08/09/07	128	Genomic	unknown
ss86348083	CANCER-GENOME\|17281	rev/T	A/G	actgtgcctgttgtgcgggccagccagaga	tgagctcggtgggagcgaatttcctatgcc	01/25/08	01/25/08	129	Genomic	unknown
ss90175589	BCMHGSC_JDW\|JWB-0863558	rev/T	A/G	actgtgcctgttgtgcgggccagccagaga	tgagctcggtgggagcgaatttcctatgcc	02/26/08	02/29/08	129	Genomic	unknown
ss96815526	HUMANGENOME_JCVI\|1103645625290	rev/T	A/G	actgtgcctgttgtgcgggccagccagaga	tgagctcggtgggagcgaatttcctatgcc	03/27/08	03/27/08	130	Genomic	unknown
ss108860680	1000GENOMES\|CEU.trio.12.15.2008_3174891_chr15_57286471	rev/T	A/G	actgtgcctgttgtgcgggccagccagaga	tgagctcggtgggagcgaatttcctatgcc	12/15/08	12/16/08	130	Genomic	unknown
ss114251676	1000GENOMES\|NA19240_2008_12_16_2849059_chr15_57286471	rev/T	A/G	actgtgcctgttgtgcgggccagccagaga	tgagctcggtgggagcgaatttcctatgcc	12/18/08	12/18/08	130	Genomic	unknown

Fasta sequence (Legend)

 GATCCATCGT CTCACCCTTC AGTTTGTCTT CATCAAGATC CACAAGGGCA AGTTCATCAC
 TCAAGCCTTT TAATAAGATG CTGATAGCGC AGGCCATGCC CACCGATCCA GTTCCTATGA
 TGGAGACCTT ACTGTGATGA ACGGGCTTCT CGGAAGTGAA ACGCTCAATA AGCTCACTCT
 TCACAGTCGC CATCTTGCTC ACGGGTGTGA AGAGCCAGGT GCCGTTGAGC GGGATGCGCG
 TTGCTTGACG CAGACACAGG GCCATCCCCA GGCATAGGAA ATTCGCTCCC ACCGAGCTCA
 Y
 TCTCTGGCTG GCCCGCACAA CAGGCACAGT CCAACTCATG GCTGCTCACT GAAGAAGTGG
 AGAGAGAGAA TGGAAAAAAG CTGCTGATCC GAACGTTGAG ACGCCAAGAG AGCCGTTGGC
 AGGACCTTCA GCACTCTACG GCAGGTGCGC GTGCCCCGCC CCCTGGCCCT CTACTGCGGC
 TGCGCGGGCC TTGCCAGAGT CTCCGACACG TGCTTTCCGT GGGTGCTCAG ACTAAGGCAG
 TGAAGGGCTG CTTCTCTAGC AAGTGATTTC TGGAGTTAGT TTTGCTAAGA GTATTATCAA

GeneView

GeneView via analysis of contig annotation:

View more variation on this gene (click to hide).

Assembly	SNP to Chr	Chr	Chr position	Contig	Contig position	Allele

Function	mRNA				Protein
Function	mRNA to Chr	Accession	Position	Allele change	Accession	Position	Residue change

GeneView via analysis of contig annotation: N/A.

GeneView via direct blast against RefSeq sequences (used when no gene model is available):

Function	Chr	mRNA				Protein
Function	Chr	SNP to mRNA	Accession	Position	Allele change	Accession	Position	Residue change

GeneView via direct blast against RefSeq sequences (used when no gene model is available): N/A

Integrated Maps:

Genome Build	Chr	Chr Pos	Contig	Contig Pos	SNP to Chr	Contig allele	Group term	Group label	Contig label	Neighbor SNP	Map Method

doesn't map to any assembly.

NCBI Resource Links

Resource

Submitter-Referenced
GenBank
NT_010289.6 ABBA01038968 BC022034 BI830589

dbSNP Blast Analysis

UniGene Cluster ID
307052

Population Diversity

	Sample Ascertainment				Genotype Detail				Alleles
ss#	Population	Individual Group	Chrom. Sample Cnt.	Source	C/C	C/T	T/T	HWP	C	T
ss40587383	HapMap-CEU	European	118	IG	0.458	0.441	0.102	1.000	0.678	0.322

	HapMap-HCB	Asian	90	IG	0.178	0.511	0.311	1.000	0.433	0.567

	HapMap-JPT	Asian	88	IG	0.136	0.477	0.386	1.000	0.375	0.625

	HapMap-YRI	Sub-Saharan African	120	IG	0.533	0.417	0.050	0.527	0.742	0.258

ss48408294	AGI_ASP population	multiple	72	IG	0.528	0.194	0.278	0.001	0.625	0.375

ss69178053	HapMap-CEU	European	120	GF	1.000				1.000

	HapMap-HCB	Asian	90	GF	1.000				1.000

	HapMap-JPT	Asian	90	GF	1.000				1.000

	HapMap-YRI	Sub-Saharan African	120	GF	1.000				1.000

Concordant Genotype	Total Sample	C/C	C/T	T/T
ss40587383	360
ss48408294	39
ss96815526	1

RefSNP Genotype Summary	Total Individual	C/C	C/T	T/T
rs3809530	565

Discordant Genotypes:
Indiviudal SampleID	SubSNP(ss)	Genotype	Population Handle	Submitter Population	Submitter SampleID	SampleID Alias	Submission Batch	NCBI ProbeID
150	ss40587383	A/A	CSHL-HAPMAP	HapMap-CEU	NA10846	CEPH1334.01	r27_ch15_CEU_bcm:genotype_0002
151	ss40587383	A/G	CSHL-HAPMAP	HapMap-CEU	NA10847	CEPH1334.02	r27_ch15_CEU_bcm:genotype_0002
157	ss40587383	A/G	CSHL-HAPMAP	HapMap-CEU	NA12144	CEPH1334.10	r27_ch15_CEU_bcm:genotype_0002
158	ss40587383	A/A	CSHL-HAPMAP	HapMap-CEU	NA12145	CEPH1334.11	r27_ch15_CEU_bcm:genotype_0002
160	ss40587383	A/G	CSHL-HAPMAP	HapMap-CEU	NA12239	CEPH1334.13	r27_ch15_CEU_bcm:genotype_0002
162	ss40587383	A/G	CSHL-HAPMAP	HapMap-CEU	NA07019	CEPH1340.02	r27_ch15_CEU_bcm:genotype_0002
170	ss40587383	A/G	CSHL-HAPMAP	HapMap-CEU	NA07000	CEPH1340.10	r27_ch15_CEU_bcm:genotype_0002
171	ss40587383	A/G	CSHL-HAPMAP	HapMap-CEU	NA07022	CEPH1340.11	r27_ch15_CEU_bcm:genotype_0002
174	ss40587383	A/G	CSHL-HAPMAP	HapMap-CEU	NA07048	CEPH1341.01	r27_ch15_CEU_bcm:genotype_0002
175	ss40587383	A/G	CSHL-HAPMAP	HapMap-CEU	NA06991	CEPH1341.02	r27_ch15_CEU_bcm:genotype_0002
185	ss40587383	A/G	CSHL-HAPMAP	HapMap-CEU	NA07055	CEPH1341.12	r27_ch15_CEU_bcm:genotype_0002
186	ss40587383	A/A	CSHL-HAPMAP	HapMap-CEU	NA06993	CEPH1341.13	r27_ch15_CEU_bcm:genotype_0002
203	ss40587383	A/G	CSHL-HAPMAP	HapMap-CEU	NA07348	CEPH1345.02	r27_ch15_CEU_bcm:genotype_0002
214	ss40587383	A/A	CSHL-HAPMAP	HapMap-CEU	NA07345	CEPH1345.13	r27_ch15_CEU_bcm:genotype_0002
225	ss40587383	A/G	CSHL-HAPMAP	HapMap-CEU	NA12043	CEPH1346.11	r27_ch15_CEU_bcm:genotype_0002
238	ss40587383	A/G	CSHL-HAPMAP	HapMap-CEU	NA11881	CEPH1347.14	r27_ch15_CEU_bcm:genotype_0002
242	ss40587383	A/A	CSHL-HAPMAP	HapMap-CEU	NA10854	CEPH1349.02	r27_ch15_CEU_bcm:genotype_0002
253	ss40587383	A/A	CSHL-HAPMAP	HapMap-CEU	NA11840	CEPH1349.14	r27_ch15_CEU_bcm:genotype_0002
254	ss40587383	A/G	CSHL-HAPMAP	HapMap-CEU	NA10856	CEPH1350.01	r27_ch15_CEU_bcm:genotype_0002
255	ss40587383	A/G	CSHL-HAPMAP	HapMap-CEU	NA10855	CEPH1350.02	r27_ch15_CEU_bcm:genotype_0002
262	ss40587383	A/G	CSHL-HAPMAP	HapMap-CEU	NA11829	CEPH1350.10	r27_ch15_CEU_bcm:genotype_0002
264	ss40587383	A/G	CSHL-HAPMAP	HapMap-CEU	NA11831	CEPH1350.12	r27_ch15_CEU_bcm:genotype_0002
335	ss40587383	A/G	CSHL-HAPMAP	HapMap-CEU	NA12707	CEPH1358.01	r27_ch15_CEU_bcm:genotype_0002
344	ss40587383	A/G	CSHL-HAPMAP	HapMap-CEU	NA12716	CEPH1358.11	r27_ch15_CEU_bcm:genotype_0002
345	ss40587383	A/G	CSHL-HAPMAP	HapMap-CEU	NA12717	CEPH1358.12	r27_ch15_CEU_bcm:genotype_0002
349	ss40587383	A/G	CSHL-HAPMAP	HapMap-CEU	NA10861	CEPH1362.02	r27_ch15_CEU_bcm:genotype_0002
362	ss40587383	A/G	CSHL-HAPMAP	HapMap-CEU	NA11994	CEPH1362.15	r27_ch15_CEU_bcm:genotype_0002
363	ss40587383	A/G	CSHL-HAPMAP	HapMap-CEU	NA11995	CEPH1362.16	r27_ch15_CEU_bcm:genotype_0002
366	ss40587383	A/A	CSHL-HAPMAP	HapMap-CEU	NA10863	CEPH1375.02	r27_ch15_CEU_bcm:genotype_0002
373	ss40587383	A/A	CSHL-HAPMAP	HapMap-CEU	NA12264	CEPH1375.11	r27_ch15_CEU_bcm:genotype_0002
374	ss40587383	A/G	CSHL-HAPMAP	HapMap-CEU	NA12234	CEPH1375.12	r27_ch15_CEU_bcm:genotype_0002
399	ss40587383	A/G	CSHL-HAPMAP	HapMap-CEU	NA10830	CEPH1408.01	r27_ch15_CEU_bcm:genotype_0002
400	ss40587383	A/G	CSHL-HAPMAP	HapMap-CEU	NA10831	CEPH1408.02	r27_ch15_CEU_bcm:genotype_0002
408	ss40587383	A/G	CSHL-HAPMAP	HapMap-CEU	NA12154	CEPH1408.10	r27_ch15_CEU_bcm:genotype_0002
410	ss40587383	A/G	CSHL-HAPMAP	HapMap-CEU	NA12155	CEPH1408.12	r27_ch15_CEU_bcm:genotype_0002
411	ss40587383	A/G	CSHL-HAPMAP	HapMap-CEU	NA12156	CEPH1408.13	r27_ch15_CEU_bcm:genotype_0002
457	ss40587383	A/G	CSHL-HAPMAP	HapMap-CEU	NA10839	CEPH1420.02	r27_ch15_CEU_bcm:genotype_0002
466	ss40587383	A/G	CSHL-HAPMAP	HapMap-CEU	NA12005	CEPH1420.11	r27_ch15_CEU_bcm:genotype_0002
524	ss40587383	A/G	CSHL-HAPMAP	HapMap-CEU	NA12740	CEPH1444.02	r27_ch15_CEU_bcm:genotype_0002
536	ss40587383	A/G	CSHL-HAPMAP	HapMap-CEU	NA12751	CEPH1444.14	r27_ch15_CEU_bcm:genotype_0002
547	ss40587383	A/G	CSHL-HAPMAP	HapMap-CEU	NA12762	CEPH1447.11	r27_ch15_CEU_bcm:genotype_0002
565	ss40587383	A/A	CSHL-HAPMAP	HapMap-CEU	NA12801	CEPH1454.01	r27_ch15_CEU_bcm:genotype_0002
566	ss40587383	A/A	CSHL-HAPMAP	HapMap-CEU	NA12802	CEPH1454.02	r27_ch15_CEU_bcm:genotype_0002
576	ss40587383	A/G	CSHL-HAPMAP	HapMap-CEU	NA12812	CEPH1454.12	r27_ch15_CEU_bcm:genotype_0002
577	ss40587383	A/G	CSHL-HAPMAP	HapMap-CEU	NA12813	CEPH1454.13	r27_ch15_CEU_bcm:genotype_0002
578	ss40587383	A/G	CSHL-HAPMAP	HapMap-CEU	NA12814	CEPH1454.14	r27_ch15_CEU_bcm:genotype_0002
579	ss40587383	A/G	CSHL-HAPMAP	HapMap-CEU	NA12815	CEPH1454.15	r27_ch15_CEU_bcm:genotype_0002
611	ss40587383	A/G	CSHL-HAPMAP	HapMap-CEU	NA12865	CEPH1459.02	r27_ch15_CEU_bcm:genotype_0002
618	ss40587383	A/G	CSHL-HAPMAP	HapMap-CEU	NA12872	CEPH1459.09	r27_ch15_CEU_bcm:genotype_0002
620	ss40587383	A/A	CSHL-HAPMAP	HapMap-CEU	NA12874	CEPH1459.11	r27_ch15_CEU_bcm:genotype_0002
637	ss40587383	A/G	CSHL-HAPMAP	HapMap-CEU	NA12892	CEPH1463.16	r27_ch15_CEU_bcm:genotype_0002
5134	ss40587383	A/G	CSHL-HAPMAP	HapMap-YRI	NA19127	YOR077.02	r27_ch15_YRI_bcm:genotype_0002
5135	ss40587383	A/G	CSHL-HAPMAP	HapMap-YRI	NA19128	YOR077.03	r27_ch15_YRI_bcm:genotype_0002
5138	ss40587383	A/G	CSHL-HAPMAP	HapMap-YRI	NA19130	YOR101.03	r27_ch15_YRI_bcm:genotype_0002
5141	ss40587383	A/G	CSHL-HAPMAP	HapMap-YRI	NA19098	YOR105.03	r27_ch15_YRI_bcm:genotype_0002
5142	ss40587383	A/G	CSHL-HAPMAP	HapMap-YRI	NA19194	YOR112.01	r27_ch15_YRI_bcm:genotype_0002
5144	ss40587383	A/G	CSHL-HAPMAP	HapMap-YRI	NA19192	YOR112.03	r27_ch15_YRI_bcm:genotype_0002
5145	ss40587383	A/G	CSHL-HAPMAP	HapMap-YRI	NA19240	YOR117.01	r27_ch15_YRI_bcm:genotype_0002
5147	ss40587383	A/G	CSHL-HAPMAP	HapMap-YRI	NA19239	YOR117.03	r27_ch15_YRI_bcm:genotype_0002
5149	ss40587383	A/A	CSHL-HAPMAP	HapMap-HCB	NA18524	CH18524	r27_ch15_CHB_bcm:genotype_0002
5151	ss40587383	A/G	CSHL-HAPMAP	HapMap-HCB	NA18558	CH18558	r27_ch15_CHB_bcm:genotype_0002
5152	ss40587383	A/G	CSHL-HAPMAP	HapMap-HCB	NA18532	CH18532	r27_ch15_CHB_bcm:genotype_0002
5153	ss40587383	A/G	CSHL-HAPMAP	HapMap-HCB	NA18561	CH18561	r27_ch15_CHB_bcm:genotype_0002
5154	ss40587383	A/G	CSHL-HAPMAP	HapMap-HCB	NA18562	CH18562	r27_ch15_CHB_bcm:genotype_0002
5155	ss40587383	A/G	CSHL-HAPMAP	HapMap-HCB	NA18537	CH18537	r27_ch15_CHB_bcm:genotype_0002
5156	ss40587383	A/A	CSHL-HAPMAP	HapMap-HCB	NA18603	CH18603	r27_ch15_CHB_bcm:genotype_0002
5157	ss40587383	A/G	CSHL-HAPMAP	HapMap-HCB	NA18540	CH18540	r27_ch15_CHB_bcm:genotype_0002
5158	ss40587383	A/A	CSHL-HAPMAP	HapMap-HCB	NA18605	CH18605	r27_ch15_CHB_bcm:genotype_0002
5159	ss40587383	A/A	CSHL-HAPMAP	HapMap-HCB	NA18542	CH18542	r27_ch15_CHB_bcm:genotype_0002
5160	ss40587383	A/A	CSHL-HAPMAP	HapMap-HCB	NA18545	CH18545	r27_ch15_CHB_bcm:genotype_0002
5161	ss40587383	A/A	CSHL-HAPMAP	HapMap-HCB	NA18572	CH18572	r27_ch15_CHB_bcm:genotype_0002
5162	ss40587383	A/A	CSHL-HAPMAP	HapMap-HCB	NA18547	CH18547	r27_ch15_CHB_bcm:genotype_0002
5163	ss40587383	A/G	CSHL-HAPMAP	HapMap-HCB	NA18609	CH18609	r27_ch15_CHB_bcm:genotype_0002
5165	ss40587383	A/G	CSHL-HAPMAP	HapMap-HCB	NA18608	CH18608	r27_ch15_CHB_bcm:genotype_0002
5166	ss40587383	A/G	CSHL-HAPMAP	HapMap-HCB	NA18552	CH18552	r27_ch15_CHB_bcm:genotype_0002
5167	ss40587383	A/G	CSHL-HAPMAP	HapMap-HCB	NA18611	CH18611	r27_ch15_CHB_bcm:genotype_0002
5168	ss40587383	A/G	CSHL-HAPMAP	HapMap-HCB	NA18555	CH18555	r27_ch15_CHB_bcm:genotype_0002
5169	ss40587383	A/G	CSHL-HAPMAP	HapMap-HCB	NA18564	CH18564	r27_ch15_CHB_bcm:genotype_0002
5170	ss40587383	A/A	CSHL-HAPMAP	HapMap-HCB	NA18566	CH18566	r27_ch15_CHB_bcm:genotype_0002
5171	ss40587383	A/G	CSHL-HAPMAP	HapMap-HCB	NA18563	CH18563	r27_ch15_CHB_bcm:genotype_0002
5172	ss40587383	A/G	CSHL-HAPMAP	HapMap-HCB	NA18570	CH18570	r27_ch15_CHB_bcm:genotype_0002
5173	ss40587383	A/G	CSHL-HAPMAP	HapMap-HCB	NA18612	CH18612	r27_ch15_CHB_bcm:genotype_0002
5174	ss40587383	A/G	CSHL-HAPMAP	HapMap-HCB	NA18571	CH18571	r27_ch15_CHB_bcm:genotype_0002
5175	ss40587383	A/A	CSHL-HAPMAP	HapMap-HCB	NA18620	CH18620	r27_ch15_CHB_bcm:genotype_0002
5176	ss40587383	A/A	CSHL-HAPMAP	HapMap-HCB	NA18621	CH18621	r27_ch15_CHB_bcm:genotype_0002
5177	ss40587383	A/G	CSHL-HAPMAP	HapMap-HCB	NA18594	CH18594	r27_ch15_CHB_bcm:genotype_0002
5179	ss40587383	A/G	CSHL-HAPMAP	HapMap-HCB	NA18573	CH18573	r27_ch15_CHB_bcm:genotype_0002
5180	ss40587383	A/A	CSHL-HAPMAP	HapMap-HCB	NA18623	CH18623	r27_ch15_CHB_bcm:genotype_0002
5183	ss40587383	A/G	CSHL-HAPMAP	HapMap-HCB	NA18624	CH18624	r27_ch15_CHB_bcm:genotype_0002
5185	ss40587383	A/A	CSHL-HAPMAP	HapMap-HCB	NA18632	CH18632	r27_ch15_CHB_bcm:genotype_0002
5187	ss40587383	A/A	CSHL-HAPMAP	HapMap-HCB	NA18633	CH18633	r27_ch15_CHB_bcm:genotype_0002
5188	ss40587383	A/G	CSHL-HAPMAP	HapMap-HCB	NA18635	CH18635	r27_ch15_CHB_bcm:genotype_0002
5189	ss40587383	A/G	CSHL-HAPMAP	HapMap-HCB	NA18592	CH18592	r27_ch15_CHB_bcm:genotype_0002
5190	ss40587383	A/G	CSHL-HAPMAP	HapMap-HCB	NA18636	CH18636	r27_ch15_CHB_bcm:genotype_0002
5191	ss40587383	A/G	CSHL-HAPMAP	HapMap-HCB	NA18593	CH18593	r27_ch15_CHB_bcm:genotype_0002
5192	ss40587383	A/A	CSHL-HAPMAP	HapMap-HCB	NA18637	CH18637	r27_ch15_CHB_bcm:genotype_0002
5193	ss40587383	A/G	CSHL-HAPMAP	HapMap-JPT	NA18942	JA18942	r27_ch15_JPT_bcm:genotype_0002
5194	ss40587383	A/G	CSHL-HAPMAP	HapMap-JPT	NA18940	JA18940	r27_ch15_JPT_bcm:genotype_0002
5195	ss40587383	A/G	CSHL-HAPMAP	HapMap-JPT	NA18951	JA18951	r27_ch15_JPT_bcm:genotype_0002
5196	ss40587383	A/G	CSHL-HAPMAP	HapMap-JPT	NA18943	JA18943	r27_ch15_JPT_bcm:genotype_0002
5197	ss40587383	A/G	CSHL-HAPMAP	HapMap-JPT	NA18947	JA18947	r27_ch15_JPT_bcm:genotype_0002
5198	ss40587383	A/A	CSHL-HAPMAP	HapMap-JPT	NA18944	JA18944	r27_ch15_JPT_bcm:genotype_0002
5199	ss40587383	A/G	CSHL-HAPMAP	HapMap-JPT	NA18945	JA18945	r27_ch15_JPT_bcm:genotype_0002
5200	ss40587383	A/A	CSHL-HAPMAP	HapMap-JPT	NA18949	JA18949	r27_ch15_JPT_bcm:genotype_0002
5201	ss40587383	A/G	CSHL-HAPMAP	HapMap-JPT	NA18948	JA18948	r27_ch15_JPT_bcm:genotype_0002
5202	ss40587383	A/A	CSHL-HAPMAP	HapMap-JPT	NA18952	JA18952	r27_ch15_JPT_bcm:genotype_0002
5204	ss40587383	A/A	CSHL-HAPMAP	HapMap-JPT	NA18964	JA18964	r27_ch15_JPT_bcm:genotype_0002
5205	ss40587383	A/A	CSHL-HAPMAP	HapMap-JPT	NA18953	JA18953	r27_ch15_JPT_bcm:genotype_0002
5206	ss40587383	A/G	CSHL-HAPMAP	HapMap-JPT	NA18968	JA18968	r27_ch15_JPT_bcm:genotype_0002
5207	ss40587383	A/G	CSHL-HAPMAP	HapMap-JPT	NA18959	JA18959	r27_ch15_JPT_bcm:genotype_0002
5209	ss40587383	A/A	CSHL-HAPMAP	HapMap-JPT	NA18960	JA18960	r27_ch15_JPT_bcm:genotype_0002
5210	ss40587383	A/G	CSHL-HAPMAP	HapMap-JPT	NA18961	JA18961	r27_ch15_JPT_bcm:genotype_0002
5212	ss40587383	A/A	CSHL-HAPMAP	HapMap-JPT	NA18965	JA18965	r27_ch15_JPT_bcm:genotype_0002
5213	ss40587383	A/A	CSHL-HAPMAP	HapMap-JPT	NA18973	JA18973	r27_ch15_JPT_bcm:genotype_0002
5214	ss40587383	A/A	CSHL-HAPMAP	HapMap-JPT	NA18966	JA18966	r27_ch15_JPT_bcm:genotype_0002
5215	ss40587383	A/G	CSHL-HAPMAP	HapMap-JPT	NA18975	JA18975	r27_ch15_JPT_bcm:genotype_0002
5216	ss40587383	A/G	CSHL-HAPMAP	HapMap-JPT	NA18967	JA18967	r27_ch15_JPT_bcm:genotype_0002
5217	ss40587383	A/A	CSHL-HAPMAP	HapMap-JPT	NA18976	JA18976	r27_ch15_JPT_bcm:genotype_0002
5218	ss40587383	A/G	CSHL-HAPMAP	HapMap-JPT	NA18978	JA18978	r27_ch15_JPT_bcm:genotype_0002
5219	ss40587383	A/G	CSHL-HAPMAP	HapMap-JPT	NA18970	JA18970	r27_ch15_JPT_bcm:genotype_0002
5220	ss40587383	A/G	CSHL-HAPMAP	HapMap-JPT	NA18980	JA18980	r27_ch15_JPT_bcm:genotype_0002
5222	ss40587383	A/A	CSHL-HAPMAP	HapMap-JPT	NA18981	JA18981	r27_ch15_JPT_bcm:genotype_0002
5223	ss40587383	A/A	CSHL-HAPMAP	HapMap-JPT	NA18971	JA18971	r27_ch15_JPT_bcm:genotype_0002
5224	ss40587383	A/G	CSHL-HAPMAP	HapMap-JPT	NA18974	JA18974	r27_ch15_JPT_bcm:genotype_0002
5225	ss40587383	A/G	CSHL-HAPMAP	HapMap-JPT	NA18987	JA18987	r27_ch15_JPT_bcm:genotype_0002
5226	ss40587383	A/G	CSHL-HAPMAP	HapMap-JPT	NA18990	JA18990	r27_ch15_JPT_bcm:genotype_0002
5227	ss40587383	A/A	CSHL-HAPMAP	HapMap-JPT	NA18991	JA18991	r27_ch15_JPT_bcm:genotype_0002
5229	ss40587383	A/A	CSHL-HAPMAP	HapMap-JPT	NA18992	JA18992	r27_ch15_JPT_bcm:genotype_0002
5231	ss40587383	A/A	CSHL-HAPMAP	HapMap-JPT	NA18998	JA18998	r27_ch15_JPT_bcm:genotype_0002
5232	ss40587383	A/G	CSHL-HAPMAP	HapMap-JPT	NA19000	JA19000	r27_ch15_JPT_bcm:genotype_0002
5233	ss40587383	A/G	CSHL-HAPMAP	HapMap-JPT	NA19005	JA19005	r27_ch15_JPT_bcm:genotype_0002
5234	ss40587383	A/A	CSHL-HAPMAP	HapMap-JPT	NA18999	JA18999	r27_ch15_JPT_bcm:genotype_0002
5235	ss40587383	A/A	CSHL-HAPMAP	HapMap-JPT	NA19007	JA19007	r27_ch15_JPT_bcm:genotype_0002
5236	ss40587383	A/G	CSHL-HAPMAP	HapMap-JPT	NA19003	JA19003	r27_ch15_JPT_bcm:genotype_0002
5239	ss40587383	A/G	CSHL-HAPMAP	HapMap-YRI	NA18505	YOR005.02	r27_ch15_YRI_bcm:genotype_0002
5240	ss40587383	A/G	CSHL-HAPMAP	HapMap-YRI	NA18504	YOR005.03	r27_ch15_YRI_bcm:genotype_0002
5248	ss40587383	A/G	CSHL-HAPMAP	HapMap-YRI	NA18517	YOR013.02	r27_ch15_YRI_bcm:genotype_0002
5249	ss40587383	A/G	CSHL-HAPMAP	HapMap-YRI	NA18516	YOR013.03	r27_ch15_YRI_bcm:genotype_0002
5257	ss40587383	A/G	CSHL-HAPMAP	HapMap-YRI	NA18852	YOR018.02	r27_ch15_YRI_bcm:genotype_0002
5264	ss40587383	A/G	CSHL-HAPMAP	HapMap-YRI	NA18862	YOR024.03	r27_ch15_YRI_bcm:genotype_0002
5268	ss40587383	A/A	CSHL-HAPMAP	HapMap-YRI	NA19094	YOR040.01	r27_ch15_YRI_bcm:genotype_0002
5269	ss40587383	A/G	CSHL-HAPMAP	HapMap-YRI	NA19093	YOR040.02	r27_ch15_YRI_bcm:genotype_0002
5270	ss40587383	A/G	CSHL-HAPMAP	HapMap-YRI	NA19092	YOR040.03	r27_ch15_YRI_bcm:genotype_0002
5271	ss40587383	A/G	CSHL-HAPMAP	HapMap-YRI	NA19103	YOR042.01	r27_ch15_YRI_bcm:genotype_0002
5272	ss40587383	A/A	CSHL-HAPMAP	HapMap-YRI	NA19102	YOR042.02	r27_ch15_YRI_bcm:genotype_0002
5278	ss40587383	A/G	CSHL-HAPMAP	HapMap-YRI	NA19201	YOR045.02	r27_ch15_YRI_bcm:genotype_0002
5280	ss40587383	A/G	CSHL-HAPMAP	HapMap-YRI	NA19173	YOR047.01	r27_ch15_YRI_bcm:genotype_0002
5281	ss40587383	A/G	CSHL-HAPMAP	HapMap-YRI	NA19172	YOR047.02	r27_ch15_YRI_bcm:genotype_0002
5283	ss40587383	A/G	CSHL-HAPMAP	HapMap-YRI	NA19205	YOR048.01	r27_ch15_YRI_bcm:genotype_0002
5284	ss40587383	A/G	CSHL-HAPMAP	HapMap-YRI	NA19204	YOR048.02	r27_ch15_YRI_bcm:genotype_0002
5285	ss40587383	A/G	CSHL-HAPMAP	HapMap-YRI	NA19203	YOR048.03	r27_ch15_YRI_bcm:genotype_0002
5288	ss40587383	A/G	CSHL-HAPMAP	HapMap-YRI	NA19210	YOR050.03	r27_ch15_YRI_bcm:genotype_0002
5289	ss40587383	A/G	CSHL-HAPMAP	HapMap-YRI	NA19208	YOR051.01	r27_ch15_YRI_bcm:genotype_0002
5290	ss40587383	A/G	CSHL-HAPMAP	HapMap-YRI	NA19206	YOR051.02	r27_ch15_YRI_bcm:genotype_0002
5291	ss40587383	A/G	CSHL-HAPMAP	HapMap-YRI	NA19207	YOR051.03	r27_ch15_YRI_bcm:genotype_0002
5292	ss40587383	A/A	CSHL-HAPMAP	HapMap-YRI	NA19161	YOR056.01	r27_ch15_YRI_bcm:genotype_0002
5293	ss40587383	A/A	CSHL-HAPMAP	HapMap-YRI	NA19159	YOR056.02	r27_ch15_YRI_bcm:genotype_0002
5294	ss40587383	A/G	CSHL-HAPMAP	HapMap-YRI	NA19160	YOR056.03	r27_ch15_YRI_bcm:genotype_0002
5304	ss40587383	A/G	CSHL-HAPMAP	HapMap-YRI	NA19154	YOR072.01	r27_ch15_YRI_bcm:genotype_0002
5305	ss40587383	A/G	CSHL-HAPMAP	HapMap-YRI	NA19152	YOR072.02	r27_ch15_YRI_bcm:genotype_0002
5306	ss40587383	A/G	CSHL-HAPMAP	HapMap-YRI	NA19153	YOR072.03	r27_ch15_YRI_bcm:genotype_0002
5307	ss40587383	A/G	CSHL-HAPMAP	HapMap-YRI	NA19145	YOR074.01	r27_ch15_YRI_bcm:genotype_0002
5308	ss40587383	A/A	CSHL-HAPMAP	HapMap-YRI	NA19143	YOR074.02	r27_ch15_YRI_bcm:genotype_0002
5309	ss40587383	A/G	CSHL-HAPMAP	HapMap-YRI	NA19144	YOR074.03	r27_ch15_YRI_bcm:genotype_0002
5310	ss40587383	A/G	CSHL-HAPMAP	HapMap-YRI	NA19129	YOR077.01	r27_ch15_YRI_bcm:genotype_0002

Genotype data submitted for	565	samples from	565	individuals	Individual with multiple genotypes submission:	0

Validation Summary:

Validation status

Marker displays
Mendelian segregation

PCR results confirmed
in multiple reactions

Homozygotes detected
in individual genotype data

DoubleHit found by: BCM_SSAHASNP, NCBI

UNKNOWN

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Revised: May 25, 2006 1:38 PM .