Reference SNP(refSNP) Cluster Report: rs2305962

Reference SNP(refSNP) Cluster Report: rs2305962

RefSNP
Organism:	human (Homo sapiens)
Molecule Type:	Genomic
Created/Updated in build:	100/130
Map to Genome Build:	36.3

Allele
Variation Class:	SNP: single nucleotide polymorphism
RefSNP Alleles:	C/G
Ancestral Allele:	C
Clinical Association:	unknown

HGVS Names
NT_006713.14:g.14585831G>C
XM_001720146.1:c.331C>G
XM_001720158.1:c.331G>C
XM_001722781.1:c.331C>G
XP_001720198.1:p.Pro111Ala
XP_001720210.1:p.Ala111Pro
XP_001722833.1:p.Pro111Ala

Links

, Linkout

SNP Details are organized in the following sections:

Submitter records for this RefSNP Cluster

The submission ss44658305 has the longest flanking sequence of all cluster members and was used to instantiate sequence for rs2305962 during BLAST analysis for the current build.

NCBI Assay ID	Handle\|Submitter ID	ss to rs Orientation /Strand	Alleles	5' Near Seq 30 bp	3' Near Seq 30 bp	Entry Date	Update Date	Build Added	Molecule Type	Success Rate
ss3253343	YUSUKE\|IMS-JST063428	fwd/T	C/G	gatactgattaccttcttgagtggaagaag	ctctaagtgttgaagcttaaggccagtgtc	09/05/01	10/10/03	100	Genomic	unknown
ss14684175	WI_SSAHASNP\|chr5.NT_006431.13_14556215	rev/B	C/G	gacactggccttaagcttcaacacttagag	cttcttccactcaagaaggtaatcagtatc	11/05/03	10/25/06	119	Genomic	unknown
ss22366629	SSAHASNP\|WGSA-200403-chr5.chr5.NT_006431.13_14556215	rev/B	C/G	gacactggccttaagcttcaacacttagag	cttcttccactcaagaaggtaatcagtatc	03/21/04	03/21/04	121	Genomic	unknown
ss23895733	PERLEGEN\|afd3287299	rev/B	C/G	gacactggccttaagcttcaacacttagag	cttcttccactcaagaaggtaatcagtatc	08/10/04	09/13/04	123	Genomic	unknown
ss44658305	ABI\|hCV3076493	rev/	C/G	gacactggccttaagcttcaacacttagag	cttcttccactcaagaaggtaatcagtatc	07/19/05	11/03/06	126	Genomic	unknown
ss68936958	PERLEGEN\|PGP03287299	rev/	C/G	gacactggccttaagcttcaacacttagag	cttcttccactcaagaaggtaatcagtatc	01/30/07	08/14/07	127	Genomic	unknown
ss74809889	AFFY\|SNP_M-183153	fwd/T	C/G	gatactgattaccttcttgagtggaagaag	ctctaagtgttgaagcttaaggccagtgtc	08/09/07	08/09/07	128	Genomic	unknown
ss74878442	ILLUMINA\|ILMN_Human_1M_rs2305962	fwd/	C/G	gatactgattaccttcttgagtggaagaag	ctctaagtgttgaagcttaaggccagtgtc	08/28/07	08/29/07	129	Genomic	unknown
ss80007929	HGSV\|Cor18507_SNV_20070510.chr5_64027229	rev/	C/G	gacactggccttaagcttcaacacttagag	cttcttccactcaagaaggtaatcagtatc	11/23/07	11/24/07	130	Genomic	unknown
ss83147981	HGSV\|Cor18555_SNV_20070510.chr5_64027229	rev/	C/G	gacactggccttaagcttcaacacttagag	cttcttccactcaagaaggtaatcagtatc	11/27/07	12/04/07	130	Genomic	unknown
ss93120114	BCMHGSC_JDW\|JWB-1986916	rev/	C/G	gacactggccttaagcttcaacacttagag	cttcttccactcaagaaggtaatcagtatc	02/26/08	03/03/08	129	Genomic	unknown
ss98622690	HUMANGENOME_JCVI\|1103654119830	rev/	C/G	gacactggccttaagcttcaacacttagag	cttcttccactcaagaaggtaatcagtatc	04/01/08	04/01/08	130	Genomic	unknown
ss109090634	1000GENOMES\|CEU.trio.12.15.2008_1277943_chr5_64027229	rev/	C/G	gacactggccttaagcttcaacacttagag	cttcttccactcaagaaggtaatcagtatc	12/15/08	12/16/08	130	Genomic	unknown
ss116641780	ILLUMINA-UK\|NA18507_000082708_NCBI36.1_chr5_64027229	rev/	C/G	gacactggccttaagcttcaacacttagag	cttcttccactcaagaaggtaatcagtatc	01/17/09	01/17/09	130	Genomic	99 %

Fasta sequence (Legend)

 TTTAATAACT GGAAGGAACA TAAATATATT TAAAGCAGAT TTACTGAACC AATGATTTAA
 TTTTCATGAG AATAATTACA TCCTGCTGCT ATTTTTCCTT CAGCACAATT TCCCTAAGGT
 ATTTCATCAT TAACGGCCTG ATTCAATGTG AATTTTTAGT GAGACACATA GTGAACTGAA
 TTTTTAAAAA GCATTCATTG TTAACAGTAT TATCACCCAG GTACAAGTTA TTCTTTTGGA
 TAGAGTTCAG GTAATTGGTA ACAAATAATA GATACTGATT ACCTTCTTGA GTGGAAGAAG
 S
 CTCTAAGTGT TGAAGCTTAA GGCCAGTGTC TAATCTTTGA GGTTTCGTAT ACAGAAATAA
 ATAGCAAAGG ACACAGACAC TGATGACAAA GGCGAGTAAA ACAAGGGCAG CAATTCCTAG
 TCCAATCAAG GCACCAATGC TGAGGAAAAC AGAAAAAAAA TATGTGTCAC ACAAAGTGGT
 TCACACTGGT TCAACTAAAG AGAAGGCATA AATATATTGT TAATTCTTGT TTTCAGTTAT
 TCATAACCAA ATTGTATTTT AGCATAAAAA GGAACTGATT GAAATCTACA GTTCACCTTT

GeneView

GeneView via analysis of contig annotation:

View more variation on this gene (click to hide).

Assembly	SNP to Chr	Chr	Chr position	Contig	Contig position	Allele

Function	mRNA				Protein
Function	mRNA to Chr	Accession	Position	Allele change	Accession	Position	Residue change

GeneView via analysis of contig annotation: N/A.

GeneView via direct blast against RefSeq sequences (used when no gene model is available):

Function	Chr	mRNA				Protein
Function	Chr	SNP to mRNA	Accession	Position	Allele change	Accession	Position	Residue change

GeneView via direct blast against RefSeq sequences (used when no gene model is available): N/A

Integrated Maps:

Genome Build	Chr	Chr Pos	Contig	Contig Pos	SNP to Chr	Contig allele	Group term	Group label	Contig label	Neighbor SNP	Map Method

doesn't map to any assembly.

NCBI Resource Links

Resource

Submitter-Referenced
GenBank
NT_006431 ABBA01048338

dbSNP Blast Analysis

UniGene Cluster ID
69504

Population Diversity

	Sample Ascertainment				Genotype Detail				Alleles
ss#	Population	Individual Group	Chrom. Sample Cnt.	Source	C/C	C/G	G/G	HWP	C	G	N
ss14684175	CHMJ	Asian	74	IG					0.459	0.514	0.027

ss23895733	AFD_EUR_PANEL	European	48	IG	0.583	0.333	0.083	0.655	0.750	0.250

	AFD_AFR_PANEL	African American	46	IG	0.304	0.522	0.174	1.000	0.565	0.435

	AFD_CHN_PANEL	Asian	48	IG	0.125	0.625	0.250	0.200	0.438	0.562

ss44658305	HapMap-CEU	European	120	IG	0.483	0.367	0.150	0.200	0.667	0.333

	HapMap-HCB	Asian	90	IG	0.200	0.578	0.222	0.317	0.489	0.511

	HapMap-JPT	Asian	88	IG	0.227	0.432	0.341	0.439	0.443	0.557

	HapMap-YRI	Sub-Saharan African	118	IG	0.441	0.458	0.102	1.000	0.669	0.331

	AoD_African_American		90	AF					0.580	0.420

	AoD_Caucasian		92	AF					0.700	0.300

ss68936958	HapMap-CEU	European	120	GF		1.000			0.500	0.500

	HapMap-HCB	Asian	90	GF		1.000			0.500	0.500

	HapMap-JPT	Asian	90	GF		1.000			0.500	0.500

	HapMap-YRI	Sub-Saharan African	120	GF		1.000			0.500	0.500

Concordant Genotype	Total Sample	C/C	C/G	G/G
ss23895733	64	12	35	17
ss44658305	374		117
ss98622690	1	1

RefSNP Genotype Summary	Total Individual	C/C	C/G	G/G
rs2305962	582	13	150	17

Discordant Genotypes:
Indiviudal SampleID	SubSNP(ss)	Genotype	Population Handle	Submitter Population	Submitter SampleID	SampleID Alias	Submission Batch	NCBI ProbeID
150	ss44658305	G/G	CSHL-HAPMAP	HapMap-CEU	NA10846	CEPH1334.01	r27_ch5_CEU_bcm:genotype_0002
157	ss44658305	G/G	CSHL-HAPMAP	HapMap-CEU	NA12144	CEPH1334.10	r27_ch5_CEU_bcm:genotype_0002
158	ss44658305	G/G	CSHL-HAPMAP	HapMap-CEU	NA12145	CEPH1334.11	r27_ch5_CEU_bcm:genotype_0002
162	ss23895733	G/G	PERLEGEN	AFD_EUR_PANEL	NA07019		71_IND_CHR_5
162	ss44658305	G/G	CSHL-HAPMAP	HapMap-CEU	NA07019	CEPH1340.02	r27_ch5_CEU_bcm:genotype_0002
169	ss44658305	C/C	CSHL-HAPMAP	HapMap-CEU	NA06994	CEPH1340.09	r27_ch5_CEU_bcm:genotype_0002
170	ss44658305	G/G	CSHL-HAPMAP	HapMap-CEU	NA07000	CEPH1340.10	r27_ch5_CEU_bcm:genotype_0002
171	ss44658305	G/G	CSHL-HAPMAP	HapMap-CEU	NA07022	CEPH1340.11	r27_ch5_CEU_bcm:genotype_0002
174	ss44658305	G/G	CSHL-HAPMAP	HapMap-CEU	NA07048	CEPH1341.01	r27_ch5_CEU_bcm:genotype_0002
175	ss44658305	G/G	CSHL-HAPMAP	HapMap-CEU	NA06991	CEPH1341.02	r27_ch5_CEU_bcm:genotype_0002
184	ss44658305	G/G	CSHL-HAPMAP	HapMap-CEU	NA07034	CEPH1341.11	r27_ch5_CEU_bcm:genotype_0002
185	ss44658305	G/G	CSHL-HAPMAP	HapMap-CEU	NA07055	CEPH1341.12	r27_ch5_CEU_bcm:genotype_0002
186	ss44658305	G/G	CSHL-HAPMAP	HapMap-CEU	NA06993	CEPH1341.13	r27_ch5_CEU_bcm:genotype_0002
187	ss44658305	G/G	CSHL-HAPMAP	HapMap-CEU	NA06985	CEPH1341.14	r27_ch5_CEU_bcm:genotype_0002
188	ss23895733	G/G	PERLEGEN	AFD_EUR_PANEL	NA10851		71_IND_CHR_5
188	ss44658305	G/G	CSHL-HAPMAP	HapMap-CEU	NA10851	CEPH1344.01	r27_ch5_CEU_bcm:genotype_0002
200	ss44658305	G/G	CSHL-HAPMAP	HapMap-CEU	NA12057	CEPH1344.13	r27_ch5_CEU_bcm:genotype_0002
203	ss23895733	G/G	PERLEGEN	AFD_EUR_PANEL	NA07348		71_IND_CHR_5
203	ss44658305	G/G	CSHL-HAPMAP	HapMap-CEU	NA07348	CEPH1345.02	r27_ch5_CEU_bcm:genotype_0002
213	ss44658305	G/G	CSHL-HAPMAP	HapMap-CEU	NA07357	CEPH1345.12	r27_ch5_CEU_bcm:genotype_0002
215	ss23895733	G/G	PERLEGEN	AFD_EUR_PANEL	NA10857		71_IND_CHR_5
215	ss44658305	G/G	CSHL-HAPMAP	HapMap-CEU	NA10857	CEPH1346.01	r27_ch5_CEU_bcm:genotype_0002
225	ss44658305	G/G	CSHL-HAPMAP	HapMap-CEU	NA12043	CEPH1346.11	r27_ch5_CEU_bcm:genotype_0002
226	ss44658305	G/G	CSHL-HAPMAP	HapMap-CEU	NA12044	CEPH1346.12	r27_ch5_CEU_bcm:genotype_0002
229	ss44658305	G/G	CSHL-HAPMAP	HapMap-CEU	NA10859	CEPH1347.02	r27_ch5_CEU_bcm:genotype_0002
238	ss44658305	G/G	CSHL-HAPMAP	HapMap-CEU	NA11881	CEPH1347.14	r27_ch5_CEU_bcm:genotype_0002
239	ss44658305	G/G	CSHL-HAPMAP	HapMap-CEU	NA11882	CEPH1347.15	r27_ch5_CEU_bcm:genotype_0002
242	ss23895733	G/G	PERLEGEN	AFD_EUR_PANEL	NA10854		71_IND_CHR_5
242	ss44658305	G/G	CSHL-HAPMAP	HapMap-CEU	NA10854	CEPH1349.02	r27_ch5_CEU_bcm:genotype_0002
253	ss44658305	G/G	CSHL-HAPMAP	HapMap-CEU	NA11840	CEPH1349.14	r27_ch5_CEU_bcm:genotype_0002
254	ss44658305	G/G	CSHL-HAPMAP	HapMap-CEU	NA10856	CEPH1350.01	r27_ch5_CEU_bcm:genotype_0002
262	ss44658305	G/G	CSHL-HAPMAP	HapMap-CEU	NA11829	CEPH1350.10	r27_ch5_CEU_bcm:genotype_0002
264	ss44658305	G/G	CSHL-HAPMAP	HapMap-CEU	NA11831	CEPH1350.12	r27_ch5_CEU_bcm:genotype_0002
344	ss44658305	C/C	CSHL-HAPMAP	HapMap-CEU	NA12716	CEPH1358.11	r27_ch5_CEU_bcm:genotype_0002
348	ss23895733	G/G	PERLEGEN	AFD_EUR_PANEL	NA10860		71_IND_CHR_5
348	ss44658305	G/G	CSHL-HAPMAP	HapMap-CEU	NA10860	CEPH1362.01	r27_ch5_CEU_bcm:genotype_0002
349	ss23895733	G/G	PERLEGEN	AFD_EUR_PANEL	NA10861		71_IND_CHR_5
349	ss44658305	G/G	CSHL-HAPMAP	HapMap-CEU	NA10861	CEPH1362.02	r27_ch5_CEU_bcm:genotype_0002
361	ss44658305	G/G	CSHL-HAPMAP	HapMap-CEU	NA11993	CEPH1362.14	r27_ch5_CEU_bcm:genotype_0002
363	ss44658305	G/G	CSHL-HAPMAP	HapMap-CEU	NA11995	CEPH1362.16	r27_ch5_CEU_bcm:genotype_0002
366	ss44658305	G/G	CSHL-HAPMAP	HapMap-CEU	NA10863	CEPH1375.02	r27_ch5_CEU_bcm:genotype_0002
373	ss44658305	G/G	CSHL-HAPMAP	HapMap-CEU	NA12264	CEPH1375.11	r27_ch5_CEU_bcm:genotype_0002
374	ss44658305	G/G	CSHL-HAPMAP	HapMap-CEU	NA12234	CEPH1375.12	r27_ch5_CEU_bcm:genotype_0002
408	ss44658305	G/G	CSHL-HAPMAP	HapMap-CEU	NA12154	CEPH1408.10	r27_ch5_CEU_bcm:genotype_0002
429	ss44658305	G/G	CSHL-HAPMAP	HapMap-CEU	NA10835	CEPH1416.01	r27_ch5_CEU_bcm:genotype_0002
439	ss44658305	G/G	CSHL-HAPMAP	HapMap-CEU	NA12249	CEPH1416.12	r27_ch5_CEU_bcm:genotype_0002
464	ss44658305	G/G	CSHL-HAPMAP	HapMap-CEU	NA12003	CEPH1420.09	r27_ch5_CEU_bcm:genotype_0002
465	ss44658305	C/C	CSHL-HAPMAP	HapMap-CEU	NA12004	CEPH1420.10	r27_ch5_CEU_bcm:genotype_0002
467	ss44658305	C/C	CSHL-HAPMAP	HapMap-CEU	NA12006	CEPH1420.12	r27_ch5_CEU_bcm:genotype_0002
524	ss44658305	C/C	CSHL-HAPMAP	HapMap-CEU	NA12740	CEPH1444.02	r27_ch5_CEU_bcm:genotype_0002
535	ss44658305	C/C	CSHL-HAPMAP	HapMap-CEU	NA12750	CEPH1444.13	r27_ch5_CEU_bcm:genotype_0002
536	ss44658305	C/C	CSHL-HAPMAP	HapMap-CEU	NA12751	CEPH1444.14	r27_ch5_CEU_bcm:genotype_0002
546	ss44658305	C/C	CSHL-HAPMAP	HapMap-CEU	NA12761	CEPH1447.10	r27_ch5_CEU_bcm:genotype_0002
547	ss44658305	G/G	CSHL-HAPMAP	HapMap-CEU	NA12762	CEPH1447.11	r27_ch5_CEU_bcm:genotype_0002
565	ss44658305	G/G	CSHL-HAPMAP	HapMap-CEU	NA12801	CEPH1454.01	r27_ch5_CEU_bcm:genotype_0002
566	ss44658305	G/G	CSHL-HAPMAP	HapMap-CEU	NA12802	CEPH1454.02	r27_ch5_CEU_bcm:genotype_0002
576	ss44658305	G/G	CSHL-HAPMAP	HapMap-CEU	NA12812	CEPH1454.12	r27_ch5_CEU_bcm:genotype_0002
610	ss44658305	G/G	CSHL-HAPMAP	HapMap-CEU	NA12864	CEPH1459.01	r27_ch5_CEU_bcm:genotype_0002
611	ss44658305	G/G	CSHL-HAPMAP	HapMap-CEU	NA12865	CEPH1459.02	r27_ch5_CEU_bcm:genotype_0002
618	ss44658305	G/G	CSHL-HAPMAP	HapMap-CEU	NA12872	CEPH1459.09	r27_ch5_CEU_bcm:genotype_0002
620	ss44658305	G/G	CSHL-HAPMAP	HapMap-CEU	NA12874	CEPH1459.11	r27_ch5_CEU_bcm:genotype_0002
621	ss44658305	G/G	CSHL-HAPMAP	HapMap-CEU	NA12875	CEPH1459.12	r27_ch5_CEU_bcm:genotype_0002
623	ss44658305	C/C	CSHL-HAPMAP	HapMap-CEU	NA12878	CEPH1463.02	r27_ch5_CEU_bcm:genotype_0002
636	ss44658305	C/C	CSHL-HAPMAP	HapMap-CEU	NA12891	CEPH1463.15	r27_ch5_CEU_bcm:genotype_0002
637	ss44658305	C/C	CSHL-HAPMAP	HapMap-CEU	NA12892	CEPH1463.16	r27_ch5_CEU_bcm:genotype_0002
5132	ss44658305	G/G	CSHL-HAPMAP	HapMap-YRI	NA18500	YOR004.01	r27_ch5_YRI_bcm:genotype_0002
5133	ss44658305	G/G	CSHL-HAPMAP	HapMap-YRI	NA18502	YOR004.02	r27_ch5_YRI_bcm:genotype_0002
5134	ss44658305	G/G	CSHL-HAPMAP	HapMap-YRI	NA19127	YOR077.02	r27_ch5_YRI_bcm:genotype_0002
5135	ss44658305	G/G	CSHL-HAPMAP	HapMap-YRI	NA19128	YOR077.03	r27_ch5_YRI_bcm:genotype_0002
5136	ss44658305	G/G	CSHL-HAPMAP	HapMap-YRI	NA19132	YOR101.01	r27_ch5_YRI_bcm:genotype_0002
5138	ss44658305	G/G	CSHL-HAPMAP	HapMap-YRI	NA19130	YOR101.03	r27_ch5_YRI_bcm:genotype_0002
5139	ss44658305	G/G	CSHL-HAPMAP	HapMap-YRI	NA19100	YOR105.01	r27_ch5_YRI_bcm:genotype_0002
5140	ss44658305	G/G	CSHL-HAPMAP	HapMap-YRI	NA19099	YOR105.02	r27_ch5_YRI_bcm:genotype_0002
5141	ss44658305	G/G	CSHL-HAPMAP	HapMap-YRI	NA19098	YOR105.03	r27_ch5_YRI_bcm:genotype_0002
5143	ss44658305	C/C	CSHL-HAPMAP	HapMap-YRI	NA19193	YOR112.02	r27_ch5_YRI_bcm:genotype_0002
5145	ss44658305	G/G	CSHL-HAPMAP	HapMap-YRI	NA19240	YOR117.01	r27_ch5_YRI_bcm:genotype_0002
5146	ss44658305	G/G	CSHL-HAPMAP	HapMap-YRI	NA19238	YOR117.02	r27_ch5_YRI_bcm:genotype_0002
5150	ss44658305	G/G	CSHL-HAPMAP	HapMap-HCB	NA18529	CH18529	r27_ch5_CHB_bcm:genotype_0002
5152	ss44658305	C/C	CSHL-HAPMAP	HapMap-HCB	NA18532	CH18532	r27_ch5_CHB_bcm:genotype_0002
5153	ss44658305	G/G	CSHL-HAPMAP	HapMap-HCB	NA18561	CH18561	r27_ch5_CHB_bcm:genotype_0002
5159	ss44658305	C/C	CSHL-HAPMAP	HapMap-HCB	NA18542	CH18542	r27_ch5_CHB_bcm:genotype_0002
5160	ss44658305	C/C	CSHL-HAPMAP	HapMap-HCB	NA18545	CH18545	r27_ch5_CHB_bcm:genotype_0002
5161	ss44658305	C/C	CSHL-HAPMAP	HapMap-HCB	NA18572	CH18572	r27_ch5_CHB_bcm:genotype_0002
5163	ss44658305	G/G	CSHL-HAPMAP	HapMap-HCB	NA18609	CH18609	r27_ch5_CHB_bcm:genotype_0002
5164	ss44658305	C/C	CSHL-HAPMAP	HapMap-HCB	NA18550	CH18550	r27_ch5_CHB_bcm:genotype_0002
5165	ss44658305	G/G	CSHL-HAPMAP	HapMap-HCB	NA18608	CH18608	r27_ch5_CHB_bcm:genotype_0002
5166	ss44658305	G/G	CSHL-HAPMAP	HapMap-HCB	NA18552	CH18552	r27_ch5_CHB_bcm:genotype_0002
5168	ss44658305	C/C	CSHL-HAPMAP	HapMap-HCB	NA18555	CH18555	r27_ch5_CHB_bcm:genotype_0002
5170	ss44658305	G/G	CSHL-HAPMAP	HapMap-HCB	NA18566	CH18566	r27_ch5_CHB_bcm:genotype_0002
5172	ss44658305	G/G	CSHL-HAPMAP	HapMap-HCB	NA18570	CH18570	r27_ch5_CHB_bcm:genotype_0002
5174	ss44658305	G/G	CSHL-HAPMAP	HapMap-HCB	NA18571	CH18571	r27_ch5_CHB_bcm:genotype_0002
5176	ss44658305	C/C	CSHL-HAPMAP	HapMap-HCB	NA18621	CH18621	r27_ch5_CHB_bcm:genotype_0002
5183	ss44658305	C/C	CSHL-HAPMAP	HapMap-HCB	NA18624	CH18624	r27_ch5_CHB_bcm:genotype_0002
5185	ss44658305	C/C	CSHL-HAPMAP	HapMap-HCB	NA18632	CH18632	r27_ch5_CHB_bcm:genotype_0002
5188	ss44658305	G/G	CSHL-HAPMAP	HapMap-HCB	NA18635	CH18635	r27_ch5_CHB_bcm:genotype_0002
5192	ss44658305	C/C	CSHL-HAPMAP	HapMap-HCB	NA18637	CH18637	r27_ch5_CHB_bcm:genotype_0002
5194	ss44658305	C/C	CSHL-HAPMAP	HapMap-JPT	NA18940	JA18940	r27_ch5_JPT_bcm:genotype_0002
5195	ss44658305	C/C	CSHL-HAPMAP	HapMap-JPT	NA18951	JA18951	r27_ch5_JPT_bcm:genotype_0002
5198	ss44658305	C/C	CSHL-HAPMAP	HapMap-JPT	NA18944	JA18944	r27_ch5_JPT_bcm:genotype_0002
5202	ss44658305	C/C	CSHL-HAPMAP	HapMap-JPT	NA18952	JA18952	r27_ch5_JPT_bcm:genotype_0002
5203	ss44658305	G/G	CSHL-HAPMAP	HapMap-JPT	NA18956	JA18956	r27_ch5_JPT_bcm:genotype_0002
5204	ss44658305	C/C	CSHL-HAPMAP	HapMap-JPT	NA18964	JA18964	r27_ch5_JPT_bcm:genotype_0002
5205	ss44658305	C/C	CSHL-HAPMAP	HapMap-JPT	NA18953	JA18953	r27_ch5_JPT_bcm:genotype_0002
5207	ss44658305	C/C	CSHL-HAPMAP	HapMap-JPT	NA18959	JA18959	r27_ch5_JPT_bcm:genotype_0002
5208	ss44658305	C/C	CSHL-HAPMAP	HapMap-JPT	NA18969	JA18969	r27_ch5_JPT_bcm:genotype_0002
5209	ss44658305	G/G	CSHL-HAPMAP	HapMap-JPT	NA18960	JA18960	r27_ch5_JPT_bcm:genotype_0002
5211	ss44658305	C/C	CSHL-HAPMAP	HapMap-JPT	NA18972	JA18972	r27_ch5_JPT_bcm:genotype_0002
5213	ss44658305	C/C	CSHL-HAPMAP	HapMap-JPT	NA18973	JA18973	r27_ch5_JPT_bcm:genotype_0002
5215	ss44658305	C/C	CSHL-HAPMAP	HapMap-JPT	NA18975	JA18975	r27_ch5_JPT_bcm:genotype_0002
5216	ss44658305	C/C	CSHL-HAPMAP	HapMap-JPT	NA18967	JA18967	r27_ch5_JPT_bcm:genotype_0002
5217	ss44658305	G/G	CSHL-HAPMAP	HapMap-JPT	NA18976	JA18976	r27_ch5_JPT_bcm:genotype_0002
5220	ss44658305	C/C	CSHL-HAPMAP	HapMap-JPT	NA18980	JA18980	r27_ch5_JPT_bcm:genotype_0002
5221	ss44658305	G/G	CSHL-HAPMAP	HapMap-JPT	NA18995	JA18995	r27_ch5_JPT_bcm:genotype_0002
5222	ss44658305	G/G	CSHL-HAPMAP	HapMap-JPT	NA18981	JA18981	r27_ch5_JPT_bcm:genotype_0002
5224	ss44658305	G/G	CSHL-HAPMAP	HapMap-JPT	NA18974	JA18974	r27_ch5_JPT_bcm:genotype_0002
5225	ss44658305	G/G	CSHL-HAPMAP	HapMap-JPT	NA18987	JA18987	r27_ch5_JPT_bcm:genotype_0002
5227	ss44658305	C/C	CSHL-HAPMAP	HapMap-JPT	NA18991	JA18991	r27_ch5_JPT_bcm:genotype_0002
5228	ss44658305	C/C	CSHL-HAPMAP	HapMap-JPT	NA18994	JA18994	r27_ch5_JPT_bcm:genotype_0002
5230	ss44658305	G/G	CSHL-HAPMAP	HapMap-JPT	NA18997	JA18997	r27_ch5_JPT_bcm:genotype_0002
5231	ss44658305	G/G	CSHL-HAPMAP	HapMap-JPT	NA18998	JA18998	r27_ch5_JPT_bcm:genotype_0002
5236	ss44658305	G/G	CSHL-HAPMAP	HapMap-JPT	NA19003	JA19003	r27_ch5_JPT_bcm:genotype_0002
5238	ss44658305	G/G	CSHL-HAPMAP	HapMap-YRI	NA18503	YOR005.01	r27_ch5_YRI_bcm:genotype_0002
5240	ss44658305	G/G	CSHL-HAPMAP	HapMap-YRI	NA18504	YOR005.03	r27_ch5_YRI_bcm:genotype_0002
5245	ss44658305	C/C	CSHL-HAPMAP	HapMap-YRI	NA18858	YOR012.02	r27_ch5_YRI_bcm:genotype_0002
5246	ss44658305	G/G	CSHL-HAPMAP	HapMap-YRI	NA18859	YOR012.03	r27_ch5_YRI_bcm:genotype_0002
5248	ss44658305	G/G	CSHL-HAPMAP	HapMap-YRI	NA18517	YOR013.02	r27_ch5_YRI_bcm:genotype_0002
5250	ss44658305	G/G	CSHL-HAPMAP	HapMap-YRI	NA18521	YOR016.01	r27_ch5_YRI_bcm:genotype_0002
5252	ss44658305	G/G	CSHL-HAPMAP	HapMap-YRI	NA18522	YOR016.03	r27_ch5_YRI_bcm:genotype_0002
5253	ss44658305	G/G	CSHL-HAPMAP	HapMap-YRI	NA18872	YOR017.01	r27_ch5_YRI_bcm:genotype_0002
5254	ss44658305	G/G	CSHL-HAPMAP	HapMap-YRI	NA18870	YOR017.02	r27_ch5_YRI_bcm:genotype_0002
5256	ss44658305	C/C	CSHL-HAPMAP	HapMap-YRI	NA18854	YOR018.01	r27_ch5_YRI_bcm:genotype_0002
5258	ss44658305	C/C	CSHL-HAPMAP	HapMap-YRI	NA18853	YOR018.03	r27_ch5_YRI_bcm:genotype_0002
5262	ss44658305	C/C	CSHL-HAPMAP	HapMap-YRI	NA18863	YOR024.01	r27_ch5_YRI_bcm:genotype_0002
5266	ss44658305	C/C	CSHL-HAPMAP	HapMap-YRI	NA18912	YOR028.02	r27_ch5_YRI_bcm:genotype_0002
5268	ss44658305	G/G	CSHL-HAPMAP	HapMap-YRI	NA19094	YOR040.01	r27_ch5_YRI_bcm:genotype_0002
5270	ss44658305	G/G	CSHL-HAPMAP	HapMap-YRI	NA19092	YOR040.03	r27_ch5_YRI_bcm:genotype_0002
5271	ss44658305	G/G	CSHL-HAPMAP	HapMap-YRI	NA19103	YOR042.01	r27_ch5_YRI_bcm:genotype_0002
5272	ss44658305	G/G	CSHL-HAPMAP	HapMap-YRI	NA19102	YOR042.02	r27_ch5_YRI_bcm:genotype_0002
5274	ss44658305	G/G	CSHL-HAPMAP	HapMap-YRI	NA19139	YOR043.01	r27_ch5_YRI_bcm:genotype_0002
5275	ss44658305	G/G	CSHL-HAPMAP	HapMap-YRI	NA19137	YOR043.02	r27_ch5_YRI_bcm:genotype_0002
5276	ss44658305	G/G	CSHL-HAPMAP	HapMap-YRI	NA19138	YOR043.03	r27_ch5_YRI_bcm:genotype_0002
5277	ss44658305	C/C	CSHL-HAPMAP	HapMap-YRI	NA19202	YOR045.01	r27_ch5_YRI_bcm:genotype_0002
5282	ss44658305	G/G	CSHL-HAPMAP	HapMap-YRI	NA19171	YOR047.03	r27_ch5_YRI_bcm:genotype_0002
5286	ss44658305	G/G	CSHL-HAPMAP	HapMap-YRI	NA19211	YOR050.01	r27_ch5_YRI_bcm:genotype_0002
5287	ss44658305	G/G	CSHL-HAPMAP	HapMap-YRI	NA19209	YOR050.02	r27_ch5_YRI_bcm:genotype_0002
5288	ss44658305	G/G	CSHL-HAPMAP	HapMap-YRI	NA19210	YOR050.03	r27_ch5_YRI_bcm:genotype_0002
5289	ss44658305	G/G	CSHL-HAPMAP	HapMap-YRI	NA19208	YOR051.01	r27_ch5_YRI_bcm:genotype_0002
5290	ss44658305	G/G	CSHL-HAPMAP	HapMap-YRI	NA19206	YOR051.02	r27_ch5_YRI_bcm:genotype_0002
5291	ss44658305	G/G	CSHL-HAPMAP	HapMap-YRI	NA19207	YOR051.03	r27_ch5_YRI_bcm:genotype_0002
5292	ss44658305	G/G	CSHL-HAPMAP	HapMap-YRI	NA19161	YOR056.01	r27_ch5_YRI_bcm:genotype_0002
5294	ss44658305	G/G	CSHL-HAPMAP	HapMap-YRI	NA19160	YOR056.03	r27_ch5_YRI_bcm:genotype_0002
5296	ss44658305	G/G	CSHL-HAPMAP	HapMap-YRI	NA19222	YOR058.02	r27_ch5_YRI_bcm:genotype_0002
5299	ss44658305	G/G	CSHL-HAPMAP	HapMap-YRI	NA19116	YOR060.02	r27_ch5_YRI_bcm:genotype_0002
5300	ss44658305	C/C	CSHL-HAPMAP	HapMap-YRI	NA19119	YOR060.03	r27_ch5_YRI_bcm:genotype_0002
5302	ss44658305	G/G	CSHL-HAPMAP	HapMap-YRI	NA19140	YOR071.02	r27_ch5_YRI_bcm:genotype_0002
5303	ss44658305	C/C	CSHL-HAPMAP	HapMap-YRI	NA19141	YOR071.03	r27_ch5_YRI_bcm:genotype_0002
5305	ss44658305	G/G	CSHL-HAPMAP	HapMap-YRI	NA19152	YOR072.02	r27_ch5_YRI_bcm:genotype_0002
5310	ss44658305	G/G	CSHL-HAPMAP	HapMap-YRI	NA19129	YOR077.01	r27_ch5_YRI_bcm:genotype_0002

Genotype data submitted for	597	samples from	582	individuals	Individual with multiple genotypes submission:	15

Validation Summary:

Validation status

Marker displays
Mendelian segregation

PCR results confirmed
in multiple reactions

Homozygotes detected
in individual genotype data

Validated by: PERLEGEN

DoubleHit found by: BCM_SSAHASNP

UNKNOWN

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Revised: May 25, 2006 1:38 PM .