Reference SNP(refSNP) Cluster Report: rs2229137

Reference SNP(refSNP) Cluster Report: rs2229137

RefSNP
Organism:	human (Homo sapiens)
Molecule Type:	Genomic
Created/Updated in build:	98/130
Map to Genome Build:	36.3

Allele
Variation Class:	SNP: single nucleotide polymorphism
RefSNP Alleles:	A/C
Ancestral Allele:	Not available
Clinical Association:	unknown

HGVS Names

Links

, Linkout

SNP Details are organized in the following sections:

Submitter records for this RefSNP Cluster

The submission ss8528369 has the longest flanking sequence of all cluster members and was used to instantiate sequence for rs2229137 during BLAST analysis for the current build.

NCBI Assay ID	Handle\|Submitter ID	ss to rs Orientation /Strand	Alleles	5' Near Seq 30 bp	3' Near Seq 30 bp	Entry Date	Update Date	Build Added	Molecule Type	Success Rate
ss3176126	WICVAR\|WIAF-17932	fwd/T	A/C	tattgtagatctgggaaggggcccatcctg	tggagctgcagacttaccgttaccacggac	06/28/01	04/07/04	98	cDNA	unknown
ss4997116	YUSUKE\|IMS-JST170513	rev/B	G/T	gtccgtggtaacggtaagtctgcagctcca	caggatgggcccctaaaacagaaccggtag	08/12/02	10/10/03	130	Genomic	unknown
ss8528369	SC_SNP\|NT_011757.12_6290249	fwd/T	A/C	ctaccggttctgttttaggggcccatcctg	tggagctgcagacttaccgttaccacggac	05/23/03	10/25/06	130	Genomic	unknown
ss24230312	PERLEGEN\|afd3906730	fwd/T	A/C	ctaccggttctgttttaggggcccatcctg	tggagctgcagacttaccgttaccacggac	08/10/04	09/13/04	130	Genomic	unknown
ss38341970	OMIMSNP\|OMIM_300502_0015	fwd/T	A/C	tattgtagatctgggaaggggcccatcctg	tggagctgcagacttaccgttaccacggac	05/17/05	05/17/05	130	cDNA	unknown
ss65727983	ILLUMINA\|Human1-rs3810710	rev/B	G/T	gtccgtggtaacggtaagtctgcagctcca	caggatgggcccctaaaacagaaccggtag	10/10/06	10/10/06	130	Genomic	unknown
ss67305549	ILLUMINA\|HumanHap550v1.1_rs3810710	rev/B	G/T	gtccgtggtaacggtaagtctgcagctcca	caggatgggcccctaaaacagaaccggtag	11/14/06	11/14/06	130	Genomic	unknown
ss67710696	ILLUMINA\|HumanHap650Yv1.0_rs3810710	rev/B	G/T	gtccgtggtaacggtaagtctgcagctcca	caggatgggcccctaaaacagaaccggtag	11/14/06	11/14/06	130	Genomic	unknown
ss68222393	ILLUMINA\|HumanHap250Sv1.0_rs3810710	rev/B	G/T	gtccgtggtaacggtaagtctgcagctcca	caggatgggcccctaaaacagaaccggtag	12/06/06	12/07/06	130	Genomic	unknown
ss69258628	PERLEGEN\|PGP03906730	fwd/T	A/C	ctaccggttctgttttaggggcccatcctg	tggagctgcagacttaccgttaccacggac	01/30/07	03/31/08	130	Genomic	unknown
ss70784202	ILLUMINA\|HumanHap550v3.0__rs3810710	fwd/T	A/C	ctaccggttctgttttaggggcccatcctg	tggagctgcagacttaccgttaccacggac	04/20/07	03/30/08	130	Genomic	unknown
ss71360885	ILLUMINA\|HumanHap650Yv3.0_rs3810710	rev/B	G/T	gtccgtggtaacggtaagtctgcagctcca	caggatgggcccctaaaacagaaccggtag	04/23/07	04/23/07	130	Genomic	unknown
ss75894045	ILLUMINA\|ILMN_Human_1M_rs3810710	rev/B	G/T	gtccgtggtaacggtaagtctgcagctcca	caggatgggcccctaaaacagaaccggtag	08/28/07	08/29/07	129	Genomic	unknown
ss84193994	KRIBB_YJKIM\|KHS655025	rev/B	G/T	gtccgtggtaacggtaagtctgcagctcca	caggatgggcccctaaaacagaaccggtag	12/04/07	12/06/07	130	Genomic	unknown

Fasta sequence (Legend)

 tttgtatttt ttgatagaga tggggttttg ccatgttgtc caggctagtc tcgaactcct
 gggcgcaagt gctctgccca cctcagcttc ccaaagtgct gggattacag gcatgagcca
 ccatgcctgg ccTTCAAAGC CTTTTTGATT CAAAACAAGC TGTTGGCAGA TTGCCTTATT
 AAAAATGAGA AAGATGAAAT ATGCAATCAA TACTTGCTAG AAATGAGAAC AGATCAGTCA
 ACCAATAAGA AATTCGTGAC AACTCAGAAG ATCTGATAAG ACTACACTGG ACGCTTAATA
 AAGGGCCTGC GTTTGAGGCC GTGGATTGCC GGCCTGTTCT TCCAGTCATC GTTCCTAACT
 AACTAACTGC CTACCGGTTC TGTTTTAGGG GCCCATCCTG
 M
 TGGAGCTGCA GACTTACCGT TACCACGGAC ACAGTATGAG TGACCCTGGA GTCAGGTACG
 CTCATGGGCA GTGTGGTTTC CATAGGGGTG GGCTTTGAAT GGTGTTACAT GGCAAAAGCA
 ACACATTTCA GTATTTGCTT TTGGAGCTAG ATACCAGTTC ACTTCATGTA CGCAGTTGTG
 TTGGGCATCA AGTTATCTGA AAGCAGTGCC TCCTAATAAG AAAGCTTTCT GAAAATGCCT
 ACAGTGTATA GTGTGTGTGA GCACAAGCAG CAATTTTTAA AGAAAGAGTG TTATATACCT
 TAATTGTAGA GGGAAATTGT TACATAAAAC AGGGCTGATG GTAGTGTAGT ATCTTGGGGG
 CATTTAGCTT TTGTAGGCAT TACCCCAAGT CTACACCTGG

GeneView

GeneView via analysis of contig annotation:

View more variation on this gene (click to hide).

Assembly	SNP to Chr	Chr	Chr position	Contig	Contig position	Allele

Function	mRNA				Protein
Function	mRNA to Chr	Accession	Position	Allele change	Accession	Position	Residue change

GeneView via analysis of contig annotation: N/A.

GeneView via direct blast against RefSeq sequences (used when no gene model is available):

Function	Chr	mRNA				Protein
Function	Chr	SNP to mRNA	Accession	Position	Allele change	Accession	Position	Residue change

GeneView via direct blast against RefSeq sequences (used when no gene model is available): N/A

Integrated Maps:

Genome Build	Chr	Chr Pos	Contig	Contig Pos	SNP to Chr	Contig allele	Group term	Group label	Contig label	Neighbor SNP	Map Method

doesn't map to any assembly.

NCBI Resource Links

Resource

Submitter-Referenced
GenBank
NT_011757 12803198 189737 190761 292412 35380 4505684

dbSNP Blast Analysis

UniGene Cluster ID
530331

Population Diversity

	Sample Ascertainment				Genotype Detail						Alleles
ss#	Population	Individual Group	Chrom. Sample Cnt.	Source	A	A/A	A/C	C	C/C	HWP	A	C
ss24230312	AFD_EUR_PANEL	European	48	IG		1.000					1.000

	AFD_AFR_PANEL	African American	46	IG		1.000					1.000

	AFD_CHN_PANEL	Asian	46	IG		0.478	0.391		0.130	0.655	0.674	0.326

ss3176126	MITOGPOP6	multiple	60	IG		0.967			0.033	0.001	0.967	0.033

ss69258628	HapMap-CEU	European	89	IG		0.508					1.000

	HapMap-HCB	Asian	65	IG		0.286	0.262			0.050	0.831	0.169

	HapMap-JPT	Asian	63	IG		0.244	0.293			0.025	0.810	0.190

	HapMap-YRI	Sub-Saharan African	90	IG		0.500					1.000

ss8528369	HapMap-CEU	European	120	IG		1.000					1.000

	HapMap-HCB	Asian	90	IG		0.689	0.222		0.089	0.584	0.800	0.200

	HapMap-JPT	Asian	88	IG		0.636	0.250		0.114	0.371	0.761	0.239

	HapMap-YRI	Sub-Saharan African	120	IG		1.000					1.000

	CHMJ	Asian	74	IG	0.811			0.189			0.811	0.189

Concordant Genotype	Total Sample	A	A/A	A/C	C	C/C
ss24230312	67		34	9		3
ss8528369	476

RefSNP Genotype Summary	Total Individual	A	A/A	A/C	C	C/C
rs2229137	666		34	9		3

Discordant Genotypes:
Indiviudal SampleID	SubSNP(ss)	Genotype	Population Handle	Submitter Population	Submitter SampleID	SampleID Alias	Submission Batch	NCBI ProbeID
150	ss8528369	T/T	CSHL-HAPMAP	HapMap-CEU	NA10846	CEPH1334.01	r27_chX_CEU_illumina:human_1m_beadchip	1031774
157	ss8528369	T/T	CSHL-HAPMAP	HapMap-CEU	NA12144	CEPH1334.10	r27_chX_CEU_illumina:human_1m_beadchip	1031774
159	ss8528369	T/T	CSHL-HAPMAP	HapMap-CEU	NA12146	CEPH1334.12	r27_chX_CEU_illumina:human_1m_beadchip	1031774
161	ss8528369	T/T	CSHL-HAPMAP	HapMap-CEU	NA07029	CEPH1340.01	r27_chX_CEU_illumina:human_1m_beadchip	1031774
169	ss8528369	T/T	CSHL-HAPMAP	HapMap-CEU	NA06994	CEPH1340.09	r27_chX_CEU_illumina:human_1m_beadchip	1031774
171	ss8528369	T/T	CSHL-HAPMAP	HapMap-CEU	NA07022	CEPH1340.11	r27_chX_CEU_illumina:human_1m_beadchip	1031774
184	ss8528369	N/N	CSHL-HAPMAP	HapMap-CEU	NA07034	CEPH1341.11	r27_chX_CEU_illumina:human_1m_beadchip	1031774
186	ss8528369	T/T	CSHL-HAPMAP	HapMap-CEU	NA06993	CEPH1341.13	r27_chX_CEU_illumina:human_1m_beadchip	1031774
188	ss8528369	N/N	CSHL-HAPMAP	HapMap-CEU	NA10851	CEPH1344.01	r27_chX_CEU_illumina:human_1m_beadchip	1031774
188	ss24230312	0/A	PERLEGEN	AFD_EUR_PANEL	NA10851		71_IND_CHR_X
199	ss8528369	T/T	CSHL-HAPMAP	HapMap-CEU	NA12056	CEPH1344.12	r27_chX_CEU_illumina:human_1m_beadchip	1031774
213	ss8528369	T/T	CSHL-HAPMAP	HapMap-CEU	NA07357	CEPH1345.12	r27_chX_CEU_illumina:human_1m_beadchip	1031774
215	ss8528369	N/N	CSHL-HAPMAP	HapMap-CEU	NA10857	CEPH1346.01	r27_chX_CEU_illumina:human_1m_beadchip	1031774
215	ss24230312	0/A	PERLEGEN	AFD_EUR_PANEL	NA10857		71_IND_CHR_X
225	ss8528369	T/T	CSHL-HAPMAP	HapMap-CEU	NA12043	CEPH1346.11	r27_chX_CEU_illumina:human_1m_beadchip	1031774
238	ss8528369	T/T	CSHL-HAPMAP	HapMap-CEU	NA11881	CEPH1347.14	r27_chX_CEU_illumina:human_1m_beadchip	1031774
252	ss8528369	T/T	CSHL-HAPMAP	HapMap-CEU	NA11839	CEPH1349.13	r27_chX_CEU_illumina:human_1m_beadchip	1031774
254	ss8528369	T/T	CSHL-HAPMAP	HapMap-CEU	NA10856	CEPH1350.01	r27_chX_CEU_illumina:human_1m_beadchip	1031774
262	ss8528369	T/T	CSHL-HAPMAP	HapMap-CEU	NA11829	CEPH1350.10	r27_chX_CEU_illumina:human_1m_beadchip	1031774
264	ss8528369	T/T	CSHL-HAPMAP	HapMap-CEU	NA11831	CEPH1350.12	r27_chX_CEU_illumina:human_1m_beadchip	1031774
335	ss8528369	T/T	CSHL-HAPMAP	HapMap-CEU	NA12707	CEPH1358.01	r27_chX_CEU_illumina:human_1m_beadchip	1031774
344	ss8528369	T/T	CSHL-HAPMAP	HapMap-CEU	NA12716	CEPH1358.11	r27_chX_CEU_illumina:human_1m_beadchip	1031774
348	ss8528369	N/N	CSHL-HAPMAP	HapMap-CEU	NA10860	CEPH1362.01	r27_chX_CEU_illumina:human_1m_beadchip	1031774
348	ss24230312	0/A	PERLEGEN	AFD_EUR_PANEL	NA10860		71_IND_CHR_X
360	ss8528369	T/T	CSHL-HAPMAP	HapMap-CEU	NA11992	CEPH1362.13	r27_chX_CEU_illumina:human_1m_beadchip	1031774
362	ss8528369	T/T	CSHL-HAPMAP	HapMap-CEU	NA11994	CEPH1362.15	r27_chX_CEU_illumina:human_1m_beadchip	1031774
373	ss8528369	T/T	CSHL-HAPMAP	HapMap-CEU	NA12264	CEPH1375.11	r27_chX_CEU_illumina:human_1m_beadchip	1031774
399	ss8528369	T/T	CSHL-HAPMAP	HapMap-CEU	NA10830	CEPH1408.01	r27_chX_CEU_illumina:human_1m_beadchip	1031774
399	ss24230312	0/A	PERLEGEN	AFD_EUR_PANEL	NA10830		71_IND_CHR_X
408	ss8528369	T/T	CSHL-HAPMAP	HapMap-CEU	NA12154	CEPH1408.10	r27_chX_CEU_illumina:human_1m_beadchip	1031774
410	ss8528369	T/T	CSHL-HAPMAP	HapMap-CEU	NA12155	CEPH1408.12	r27_chX_CEU_illumina:human_1m_beadchip	1031774
429	ss8528369	T/T	CSHL-HAPMAP	HapMap-CEU	NA10835	CEPH1416.01	r27_chX_CEU_illumina:human_1m_beadchip	1031774
456	ss8528369	T/T	CSHL-HAPMAP	HapMap-CEU	NA10838	CEPH1420.01	r27_chX_CEU_illumina:human_1m_beadchip	1031774
464	ss8528369	T/T	CSHL-HAPMAP	HapMap-CEU	NA12003	CEPH1420.09	r27_chX_CEU_illumina:human_1m_beadchip	1031774
466	ss8528369	T/T	CSHL-HAPMAP	HapMap-CEU	NA12005	CEPH1420.11	r27_chX_CEU_illumina:human_1m_beadchip	1031774
535	ss8528369	T/T	CSHL-HAPMAP	HapMap-CEU	NA12750	CEPH1444.13	r27_chX_CEU_illumina:human_1m_beadchip	1031774
537	ss8528369	T/T	CSHL-HAPMAP	HapMap-CEU	NA12752	CEPH1447.01	r27_chX_CEU_illumina:human_1m_beadchip	1031774
545	ss8528369	T/T	CSHL-HAPMAP	HapMap-CEU	NA12760	CEPH1447.09	r27_chX_CEU_illumina:human_1m_beadchip	1031774
547	ss8528369	T/T	CSHL-HAPMAP	HapMap-CEU	NA12762	CEPH1447.11	r27_chX_CEU_illumina:human_1m_beadchip	1031774
565	ss8528369	T/T	CSHL-HAPMAP	HapMap-CEU	NA12801	CEPH1454.01	r27_chX_CEU_illumina:human_1m_beadchip	1031774
576	ss8528369	T/T	CSHL-HAPMAP	HapMap-CEU	NA12812	CEPH1454.12	r27_chX_CEU_illumina:human_1m_beadchip	1031774
578	ss8528369	T/T	CSHL-HAPMAP	HapMap-CEU	NA12814	CEPH1454.14	r27_chX_CEU_illumina:human_1m_beadchip	1031774
610	ss8528369	T/T	CSHL-HAPMAP	HapMap-CEU	NA12864	CEPH1459.01	r27_chX_CEU_illumina:human_1m_beadchip	1031774
618	ss8528369	T/T	CSHL-HAPMAP	HapMap-CEU	NA12872	CEPH1459.09	r27_chX_CEU_illumina:human_1m_beadchip	1031774
620	ss8528369	T/T	CSHL-HAPMAP	HapMap-CEU	NA12874	CEPH1459.11	r27_chX_CEU_illumina:human_1m_beadchip	1031774
636	ss8528369	T/T	CSHL-HAPMAP	HapMap-CEU	NA12891	CEPH1463.15	r27_chX_CEU_illumina:human_1m_beadchip	1031774
5132	ss8528369	T/T	CSHL-HAPMAP	HapMap-YRI	NA18500	YOR004.01	r27_chX_YRI_illumina:golden_gate_1.1.0	1031774
5135	ss8528369	T/T	CSHL-HAPMAP	HapMap-YRI	NA19128	YOR077.03	r27_chX_YRI_illumina:golden_gate_1.1.0	1031774
5138	ss8528369	T/T	CSHL-HAPMAP	HapMap-YRI	NA19130	YOR101.03	r27_chX_YRI_illumina:golden_gate_1.1.0	1031774
5141	ss8528369	T/T	CSHL-HAPMAP	HapMap-YRI	NA19098	YOR105.03	r27_chX_YRI_illumina:golden_gate_1.1.0	1031774
5142	ss8528369	T/T	CSHL-HAPMAP	HapMap-YRI	NA19194	YOR112.01	r27_chX_YRI_illumina:golden_gate_1.1.0	1031774
5144	ss8528369	T/T	CSHL-HAPMAP	HapMap-YRI	NA19192	YOR112.03	r27_chX_YRI_illumina:golden_gate_1.1.0	1031774
5147	ss8528369	T/T	CSHL-HAPMAP	HapMap-YRI	NA19239	YOR117.03	r27_chX_YRI_illumina:golden_gate_1.1.0	1031774
5149	ss8528369	T/T	CSHL-HAPMAP	HapMap-HCB	NA18524	CH18524	r27_chX_CHB_illumina:human_1m_beadchip	1031774
5151	ss8528369	T/T	CSHL-HAPMAP	HapMap-HCB	NA18558	CH18558	r27_chX_CHB_illumina:human_1m_beadchip	1031774
5153	ss8528369	T/T	CSHL-HAPMAP	HapMap-HCB	NA18561	CH18561	r27_chX_CHB_illumina:human_1m_beadchip	1031774
5154	ss8528369	T/T	CSHL-HAPMAP	HapMap-HCB	NA18562	CH18562	r27_chX_CHB_illumina:human_1m_beadchip	1031774
5156	ss8528369	T/T	CSHL-HAPMAP	HapMap-HCB	NA18603	CH18603	r27_chX_CHB_illumina:human_1m_beadchip	1031774
5158	ss8528369	T/T	CSHL-HAPMAP	HapMap-HCB	NA18605	CH18605	r27_chX_CHB_illumina:human_1m_beadchip	1031774
5163	ss8528369	T/T	CSHL-HAPMAP	HapMap-HCB	NA18609	CH18609	r27_chX_CHB_illumina:human_1m_beadchip	1031774
5167	ss8528369	T/T	CSHL-HAPMAP	HapMap-HCB	NA18611	CH18611	r27_chX_CHB_illumina:human_1m_beadchip	1031774
5171	ss8528369	T/T	CSHL-HAPMAP	HapMap-HCB	NA18563	CH18563	r27_chX_CHB_illumina:human_1m_beadchip	1031774
5175	ss8528369	T/T	CSHL-HAPMAP	HapMap-HCB	NA18620	CH18620	r27_chX_CHB_illumina:human_1m_beadchip	1031774
5176	ss8528369	T/T	CSHL-HAPMAP	HapMap-HCB	NA18621	CH18621	r27_chX_CHB_illumina:human_1m_beadchip	1031774
5178	ss8528369	T/T	CSHL-HAPMAP	HapMap-HCB	NA18622	CH18622	r27_chX_CHB_illumina:human_1m_beadchip	1031774
5179	ss8528369	G/G	CSHL-HAPMAP	HapMap-HCB	NA18573	CH18573	r27_chX_CHB_illumina:human_1m_beadchip	1031774
5180	ss8528369	T/T	CSHL-HAPMAP	HapMap-HCB	NA18623	CH18623	r27_chX_CHB_illumina:human_1m_beadchip	1031774
5183	ss8528369	T/T	CSHL-HAPMAP	HapMap-HCB	NA18624	CH18624	r27_chX_CHB_illumina:human_1m_beadchip	1031774
5185	ss8528369	T/T	CSHL-HAPMAP	HapMap-HCB	NA18632	CH18632	r27_chX_CHB_illumina:human_1m_beadchip	1031774
5187	ss8528369	T/T	CSHL-HAPMAP	HapMap-HCB	NA18633	CH18633	r27_chX_CHB_illumina:human_1m_beadchip	1031774
5188	ss8528369	T/T	CSHL-HAPMAP	HapMap-HCB	NA18635	CH18635	r27_chX_CHB_illumina:human_1m_beadchip	1031774
5190	ss8528369	T/T	CSHL-HAPMAP	HapMap-HCB	NA18636	CH18636	r27_chX_CHB_illumina:human_1m_beadchip	1031774
5192	ss8528369	T/T	CSHL-HAPMAP	HapMap-HCB	NA18637	CH18637	r27_chX_CHB_illumina:human_1m_beadchip	1031774
5194	ss8528369	T/T	CSHL-HAPMAP	HapMap-JPT	NA18940	JA18940	r27_chX_JPT_illumina:human_1m_beadchip	1031774
5196	ss8528369	T/T	CSHL-HAPMAP	HapMap-JPT	NA18943	JA18943	r27_chX_JPT_illumina:human_1m_beadchip	1031774
5198	ss8528369	T/T	CSHL-HAPMAP	HapMap-JPT	NA18944	JA18944	r27_chX_JPT_illumina:human_1m_beadchip	1031774
5199	ss8528369	T/T	CSHL-HAPMAP	HapMap-JPT	NA18945	JA18945	r27_chX_JPT_illumina:human_1m_beadchip	1031774
5201	ss8528369	T/T	CSHL-HAPMAP	HapMap-JPT	NA18948	JA18948	r27_chX_JPT_illumina:human_1m_beadchip	1031774
5202	ss8528369	T/T	CSHL-HAPMAP	HapMap-JPT	NA18952	JA18952	r27_chX_JPT_illumina:human_1m_beadchip	1031774
5205	ss8528369	T/T	CSHL-HAPMAP	HapMap-JPT	NA18953	JA18953	r27_chX_JPT_illumina:human_1m_beadchip	1031774
5207	ss8528369	T/T	CSHL-HAPMAP	HapMap-JPT	NA18959	JA18959	r27_chX_JPT_illumina:human_1m_beadchip	1031774
5210	ss8528369	T/T	CSHL-HAPMAP	HapMap-JPT	NA18961	JA18961	r27_chX_JPT_illumina:human_1m_beadchip	1031774
5212	ss8528369	T/T	CSHL-HAPMAP	HapMap-JPT	NA18965	JA18965	r27_chX_JPT_illumina:human_1m_beadchip	1031774
5214	ss8528369	T/T	CSHL-HAPMAP	HapMap-JPT	NA18966	JA18966	r27_chX_JPT_illumina:human_1m_beadchip	1031774
5216	ss8528369	T/T	CSHL-HAPMAP	HapMap-JPT	NA18967	JA18967	r27_chX_JPT_illumina:human_1m_beadchip	1031774
5218	ss8528369	G/T	CSHL-HAPMAP	HapMap-JPT	NA18978	JA18978	r27_chX_JPT_illumina:human_1m_beadchip	1031774
5219	ss8528369	T/T	CSHL-HAPMAP	HapMap-JPT	NA18970	JA18970	r27_chX_JPT_illumina:human_1m_beadchip	1031774
5223	ss8528369	T/T	CSHL-HAPMAP	HapMap-JPT	NA18971	JA18971	r27_chX_JPT_illumina:human_1m_beadchip	1031774
5228	ss8528369	T/T	CSHL-HAPMAP	HapMap-JPT	NA18994	JA18994	r27_chX_JPT_illumina:human_1m_beadchip	1031774
5232	ss8528369	T/T	CSHL-HAPMAP	HapMap-JPT	NA19000	JA19000	r27_chX_JPT_illumina:human_1m_beadchip	1031774
5233	ss8528369	T/T	CSHL-HAPMAP	HapMap-JPT	NA19005	JA19005	r27_chX_JPT_illumina:human_1m_beadchip	1031774
5235	ss8528369	T/T	CSHL-HAPMAP	HapMap-JPT	NA19007	JA19007	r27_chX_JPT_illumina:human_1m_beadchip	1031774
5237	ss8528369	T/T	CSHL-HAPMAP	HapMap-YRI	NA18501	YOR004.03	r27_chX_YRI_illumina:golden_gate_1.1.0	1031774
5238	ss8528369	T/T	CSHL-HAPMAP	HapMap-YRI	NA18503	YOR005.01	r27_chX_YRI_illumina:golden_gate_1.1.0	1031774
5240	ss8528369	T/T	CSHL-HAPMAP	HapMap-YRI	NA18504	YOR005.03	r27_chX_YRI_illumina:golden_gate_1.1.0	1031774
5241	ss8528369	T/T	CSHL-HAPMAP	HapMap-YRI	NA18506	YOR009.01	r27_chX_YRI_illumina:golden_gate_1.1.0	1031774
5243	ss8528369	T/T	CSHL-HAPMAP	HapMap-YRI	NA18507	YOR009.03	r27_chX_YRI_illumina:golden_gate_1.1.0	1031774
5244	ss8528369	T/T	CSHL-HAPMAP	HapMap-YRI	NA18860	YOR012.01	r27_chX_YRI_illumina:golden_gate_1.1.0	1031774
5246	ss8528369	T/T	CSHL-HAPMAP	HapMap-YRI	NA18859	YOR012.03	r27_chX_YRI_illumina:golden_gate_1.1.0	1031774
5247	ss8528369	T/T	CSHL-HAPMAP	HapMap-YRI	NA18515	YOR013.01	r27_chX_YRI_illumina:golden_gate_1.1.0	1031774
5249	ss8528369	T/T	CSHL-HAPMAP	HapMap-YRI	NA18516	YOR013.03	r27_chX_YRI_illumina:golden_gate_1.1.0	1031774
5250	ss8528369	T/T	CSHL-HAPMAP	HapMap-YRI	NA18521	YOR016.01	r27_chX_YRI_illumina:golden_gate_1.1.0	1031774
5252	ss8528369	T/T	CSHL-HAPMAP	HapMap-YRI	NA18522	YOR016.03	r27_chX_YRI_illumina:golden_gate_1.1.0	1031774
5253	ss8528369	T/T	CSHL-HAPMAP	HapMap-YRI	NA18872	YOR017.01	r27_chX_YRI_illumina:golden_gate_1.1.0	1031774
5255	ss8528369	T/T	CSHL-HAPMAP	HapMap-YRI	NA18871	YOR017.03	r27_chX_YRI_illumina:golden_gate_1.1.0	1031774
5256	ss8528369	T/T	CSHL-HAPMAP	HapMap-YRI	NA18854	YOR018.01	r27_chX_YRI_illumina:golden_gate_1.1.0	1031774
5258	ss8528369	T/T	CSHL-HAPMAP	HapMap-YRI	NA18853	YOR018.03	r27_chX_YRI_illumina:golden_gate_1.1.0	1031774
5259	ss8528369	T/T	CSHL-HAPMAP	HapMap-YRI	NA18857	YOR023.01	r27_chX_YRI_illumina:golden_gate_1.1.0	1031774
5261	ss8528369	T/T	CSHL-HAPMAP	HapMap-YRI	NA18856	YOR023.03	r27_chX_YRI_illumina:golden_gate_1.1.0	1031774
5262	ss8528369	T/T	CSHL-HAPMAP	HapMap-YRI	NA18863	YOR024.01	r27_chX_YRI_illumina:golden_gate_1.1.0	1031774
5264	ss8528369	T/T	CSHL-HAPMAP	HapMap-YRI	NA18862	YOR024.03	r27_chX_YRI_illumina:golden_gate_1.1.0	1031774
5265	ss8528369	T/T	CSHL-HAPMAP	HapMap-YRI	NA18914	YOR028.01	r27_chX_YRI_illumina:golden_gate_1.1.0	1031774
5267	ss8528369	T/T	CSHL-HAPMAP	HapMap-YRI	NA18913	YOR028.03	r27_chX_YRI_illumina:golden_gate_1.1.0	1031774
5270	ss8528369	T/T	CSHL-HAPMAP	HapMap-YRI	NA19092	YOR040.03	r27_chX_YRI_illumina:golden_gate_1.1.0	1031774
5271	ss8528369	T/T	CSHL-HAPMAP	HapMap-YRI	NA19103	YOR042.01	r27_chX_YRI_illumina:golden_gate_1.1.0	1031774
5273	ss8528369	T/T	CSHL-HAPMAP	HapMap-YRI	NA19101	YOR042.03	r27_chX_YRI_illumina:golden_gate_1.1.0	1031774
5274	ss8528369	T/T	CSHL-HAPMAP	HapMap-YRI	NA19139	YOR043.01	r27_chX_YRI_illumina:golden_gate_1.1.0	1031774
5276	ss8528369	T/T	CSHL-HAPMAP	HapMap-YRI	NA19138	YOR043.03	r27_chX_YRI_illumina:golden_gate_1.1.0	1031774
5279	ss8528369	T/T	CSHL-HAPMAP	HapMap-YRI	NA19200	YOR045.03	r27_chX_YRI_illumina:golden_gate_1.1.0	1031774
5280	ss8528369	T/T	CSHL-HAPMAP	HapMap-YRI	NA19173	YOR047.01	r27_chX_YRI_illumina:golden_gate_1.1.0	1031774
5282	ss8528369	T/T	CSHL-HAPMAP	HapMap-YRI	NA19171	YOR047.03	r27_chX_YRI_illumina:golden_gate_1.1.0	1031774
5283	ss8528369	T/T	CSHL-HAPMAP	HapMap-YRI	NA19205	YOR048.01	r27_chX_YRI_illumina:golden_gate_1.1.0	1031774
5285	ss8528369	T/T	CSHL-HAPMAP	HapMap-YRI	NA19203	YOR048.03	r27_chX_YRI_illumina:golden_gate_1.1.0	1031774
5286	ss8528369	T/T	CSHL-HAPMAP	HapMap-YRI	NA19211	YOR050.01	r27_chX_YRI_illumina:golden_gate_1.1.0	1031774
5288	ss8528369	T/T	CSHL-HAPMAP	HapMap-YRI	NA19210	YOR050.03	r27_chX_YRI_illumina:golden_gate_1.1.0	1031774
5289	ss8528369	T/T	CSHL-HAPMAP	HapMap-YRI	NA19208	YOR051.01	r27_chX_YRI_illumina:golden_gate_1.1.0	1031774
5291	ss8528369	T/T	CSHL-HAPMAP	HapMap-YRI	NA19207	YOR051.03	r27_chX_YRI_illumina:golden_gate_1.1.0	1031774
5292	ss8528369	T/T	CSHL-HAPMAP	HapMap-YRI	NA19161	YOR056.01	r27_chX_YRI_illumina:golden_gate_1.1.0	1031774
5294	ss8528369	T/T	CSHL-HAPMAP	HapMap-YRI	NA19160	YOR056.03	r27_chX_YRI_illumina:golden_gate_1.1.0	1031774
5297	ss8528369	T/T	CSHL-HAPMAP	HapMap-YRI	NA19223	YOR058.03	r27_chX_YRI_illumina:golden_gate_1.1.0	1031774
5298	ss8528369	T/T	CSHL-HAPMAP	HapMap-YRI	NA19120	YOR060.01	r27_chX_YRI_illumina:golden_gate_1.1.0	1031774
5300	ss8528369	T/T	CSHL-HAPMAP	HapMap-YRI	NA19119	YOR060.03	r27_chX_YRI_illumina:golden_gate_1.1.0	1031774
5301	ss8528369	T/T	CSHL-HAPMAP	HapMap-YRI	NA19142	YOR071.01	r27_chX_YRI_illumina:golden_gate_1.1.0	1031774
5303	ss8528369	T/T	CSHL-HAPMAP	HapMap-YRI	NA19141	YOR071.03	r27_chX_YRI_illumina:golden_gate_1.1.0	1031774
5304	ss8528369	T/T	CSHL-HAPMAP	HapMap-YRI	NA19154	YOR072.01	r27_chX_YRI_illumina:golden_gate_1.1.0	1031774
5306	ss8528369	T/T	CSHL-HAPMAP	HapMap-YRI	NA19153	YOR072.03	r27_chX_YRI_illumina:golden_gate_1.1.0	1031774
5307	ss8528369	T/T	CSHL-HAPMAP	HapMap-YRI	NA19145	YOR074.01	r27_chX_YRI_illumina:golden_gate_1.1.0	1031774
5309	ss8528369	T/T	CSHL-HAPMAP	HapMap-YRI	NA19144	YOR074.03	r27_chX_YRI_illumina:golden_gate_1.1.0	1031774

Genotype data submitted for	681	samples from	666	individuals	Individual with multiple genotypes submission:	15

Validation Summary:

Validation status	Marker displays Mendelian segregation	PCR results confirmed in multiple reactions	Homozygotes detected in individual genotype data
	UNKNOWN	YES	YES

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Revised: May 25, 2006 1:38 PM .