Reference SNP(refSNP) Cluster Report: rs2071601

Reference SNP(refSNP) Cluster Report: rs2071601

RefSNP
Organism:	human (Homo sapiens)
Molecule Type:	Genomic
Created/Updated in build:	96/130
Map to Genome Build:	36.3

Allele
Variation Class:	SNP: single nucleotide polymorphism
RefSNP Alleles:	C/G
Ancestral Allele:	C
Clinical Association:	unknown

HGVS Names
NM_002280.4:c.1327C>G
NP_002271.3:p.Pro443Ala
NT_010755.15:g.3357645G>C

Links

, Linkout

SNP Details are organized in the following sections:

Submitter records for this RefSNP Cluster

The submission ss40844252 has the longest flanking sequence of all cluster members and was used to instantiate sequence for rs2071601 during BLAST analysis for the current build.

NCBI Assay ID	Handle\|Submitter ID	ss to rs Orientation /Strand	Alleles	5' Near Seq 30 bp	3' Near Seq 30 bp	Entry Date	Update Date	Build Added	Molecule Type	Success Rate
ss2985273	YUSUKE\|IMS-JST007146	fwd/T	C/G	ggtcctagtgcagcccgcacaaactgcagc	cccgccccatttgtgtgccctgcccagggg	05/24/01	10/25/06	96	Genomic	unknown
ss3186645	HGBASE\|SNP000572229	fwd/T	C/G	tagtgcagcccgcacaaactgcagc	cccgccccatttgtgtgccctgccc	07/09/01	10/10/03	98	Genomic	unknown
ss12386290	WI_SSAHASNP\|chr17.NT_010755.13_3356071	rev/B	C/G	cccctgggcagggcacacaaatggggcggg	gctgcagtttgtgcgggctgcactaggacc	07/04/03	10/10/03	116	Genomic	unknown
ss14302921	BCM_SSAHASNP\|chr17.NT_010755.14_3355847	rev/B	C/G	cccctgggcagggcacacaaatggggcggg	gctgcagtttgtgcgggctgcactaggacc	11/05/03	10/25/06	119	Genomic	unknown
ss40844252	ABI\|hCV26648311	rev/	C/G	cccctgggcagggcacacaaatggggcggg	gctgcagtttgtgcgggctgcactaggacc	07/17/05	11/03/06	126	Genomic	unknown
ss69196314	PERLEGEN\|PGP04229181	rev/	C/G	cccctgggcagggcacacaaatggggcggg	gctgcagtttgtgcgggctgcactaggacc	01/30/07	08/14/07	127	Genomic	unknown
ss77467776	HGSV\|Cor12156_SNV_20070510.chr17_36886875	rev/	C/G	cccctgggcagggcacacaaatggggcggg	gctgcagtttgtgcgggctgcactaggacc	10/09/07	10/13/07	129	Genomic	unknown
ss78334673	HGSV\|Cor12878_SNV_20070510.chr17_36886875	rev/	C/G	cccctgggcagggcacacaaatggggcggg	gctgcagtttgtgcgggctgcactaggacc	10/17/07	10/18/07	129	Genomic	unknown
ss83174742	HGSV\|Cor18956_SNV_20070510.chr17_36886875	rev/	C/G	cccctgggcagggcacacaaatggggcggg	gctgcagtttgtgcgggctgcactaggacc	11/30/07	12/04/07	130	Genomic	unknown
ss85333888	HGSV\|Cor19129_SNV_20070510.chr17_36886875	rev/	C/G	cccctgggcagggcacacaaatggggcggg	gctgcagtttgtgcgggctgcactaggacc	12/06/07	12/09/07	130	Genomic	unknown
ss96545768	HUMANGENOME_JCVI\|1103645324505	rev/	C/G	cccctgggcagggcacacaaatggggcggg	gctgcagtttgtgcgggctgcactaggacc	03/26/08	03/26/08	130	Genomic	unknown
ss109763424	1000GENOMES\|CEU.trio.12.15.2008_3398603_chr17_36886875	rev/	C/G	cccctgggcagggcacacaaatggggcggg	gctgcagtttgtgcgggctgcactaggacc	12/15/08	12/16/08	130	Genomic	unknown
ss113531447	1000GENOMES\|NA19240_2008_12_16_3057695_chr17_36886875	rev/	C/G	cccctgggcagggcacacaaatggggcggg	gctgcagtttgtgcgggctgcactaggacc	12/18/08	12/18/08	130	Genomic	unknown
ss118054118	ILLUMINA-UK\|NA18507_000043127_NCBI36.1_chr17_36886875	rev/	C/G	cccctgggcagggcacacaaatggggcggg	gctgcagtttgtgcgggctgcactaggacc	01/20/09	01/20/09	130	Genomic	99 %

Fasta sequence (Legend)

 GTCTTCCTGA AAACTCATCA CGTGACTCCA GCAAGCCCCC TTTCCTCTCA GGGCCTGTTT
 CCCTTTTGGT AAAACAAGGG GGCAGGATCA AGGTGGTTTT TAGGGTGCTT CCCAGTTTGC
 ATAGTCTAGG ATCTACTTTG AGTTACTGCA AACAGCAACT GGAAAATCAC AGTAATTTGT
 TTTCTTTTTT CTAGGCTCCC CTGTAACCCA TGTGCACCTG ACTACTCACC CTCCAAGTCA
 TGCCTTCCCT GTCTTCCTGC GGCCTCCTGC GGTCCTAGTG CAGCCCGCAC AAACTGCAGC
 S
 CCCGCCCCAT TTGTGTGCCC TGCCCAGGGG GCCGGTTCTG AGAGCGGGTG ACCCAGATGG
 CCATGGCTAT TGTCTCCAGG GCTTGAACTT GGCCTCTACC CAAACTTAAC CCTTGTAGCC
 CAATCCCCTC TCTTCGCGCA GAGCCCAGGC CCAGGGTCTG GCTGAAAAGG CTTTCTGCAA
 ATACATGCCC TAAAGTTTCT CAGAGCCTGT CACAAAGGCC GGCTGCCCCC AAAGGTCTCA
 ACTCCTCATC ATTTCAATGG GTGCCAGGGT CTCTGTTCTC AGGCTGCCTC CTGGGTCAGG

GeneView

GeneView via analysis of contig annotation:

View more variation on this gene (click to hide).

Assembly	SNP to Chr	Chr	Chr position	Contig	Contig position	Allele

Function	mRNA				Protein
Function	mRNA to Chr	Accession	Position	Allele change	Accession	Position	Residue change

GeneView via analysis of contig annotation: N/A.

GeneView via direct blast against RefSeq sequences (used when no gene model is available):

Function	Chr	mRNA				Protein
Function	Chr	SNP to mRNA	Accession	Position	Allele change	Accession	Position	Residue change

GeneView via direct blast against RefSeq sequences (used when no gene model is available): N/A

Integrated Maps:

Genome Build	Chr	Chr Pos	Contig	Contig Pos	SNP to Chr	Contig allele	Group term	Group label	Contig label	Neighbor SNP	Map Method

doesn't map to any assembly.

NCBI Resource Links

Resource

Submitter-Referenced
GenBank
Y16791.1 ABBA01031810

dbSNP Blast Analysis

UniGene Cluster ID
73082

Population Diversity

	Sample Ascertainment				Genotype Detail				Alleles
ss#	Population	Individual Group	Chrom. Sample Cnt.	Source	C/C	C/G	G/G	HWP	C	G
ss14302921	EURAME		32	GF	0.250	0.688	0.062	0.100	0.594	0.406

	AFRAME		28	GF	0.143	0.429	0.429	1.000	0.357	0.643

ss2985273	JBIC-allele		1440	AF					0.603	0.397

ss40844252	HapMap-CEU	European	114	IG	0.316	0.456	0.228	0.584	0.544	0.456

	HapMap-HCB	Asian	90	IG	0.422	0.444	0.133	1.000	0.644	0.356

	HapMap-JPT	Asian	88	IG	0.432	0.477	0.091	0.655	0.670	0.330

	HapMap-YRI	Sub-Saharan African	108	IG	0.074	0.500	0.426	0.317	0.324	0.676

ss69196314	HapMap-CEU	European	120	GF	0.767	0.233			0.883	0.117

	HapMap-HCB	Asian	90	GF	0.822	0.178			0.911	0.089

	HapMap-JPT	Asian	90	GF	0.822	0.178			0.911	0.089

	HapMap-YRI	Sub-Saharan African	120	GF	0.617	0.383			0.808	0.192

Concordant Genotype	Total Sample	C/C	C/G	G/G
ss40844252	353		16	69
ss96545768	1	1

RefSNP Genotype Summary	Total Individual	C/C	C/G	G/G
rs2071601	526	1	16	69

Discordant Genotypes:
Indiviudal SampleID	SubSNP(ss)	Genotype	Population Handle	Submitter Population	Submitter SampleID	SampleID Alias	Submission Batch	NCBI ProbeID
150	ss40844252	C/G	CSHL-HAPMAP	HapMap-CEU	NA10846	CEPH1334.01	r27_ch17_CEU_bcm:genotype_0002
158	ss40844252	C/C	CSHL-HAPMAP	HapMap-CEU	NA12145	CEPH1334.11	r27_ch17_CEU_bcm:genotype_0002
169	ss40844252	C/C	CSHL-HAPMAP	HapMap-CEU	NA06994	CEPH1340.09	r27_ch17_CEU_bcm:genotype_0002
174	ss40844252	C/C	CSHL-HAPMAP	HapMap-CEU	NA07048	CEPH1341.01	r27_ch17_CEU_bcm:genotype_0002
175	ss40844252	C/G	CSHL-HAPMAP	HapMap-CEU	NA06991	CEPH1341.02	r27_ch17_CEU_bcm:genotype_0002
184	ss40844252	C/G	CSHL-HAPMAP	HapMap-CEU	NA07034	CEPH1341.11	r27_ch17_CEU_bcm:genotype_0002
185	ss40844252	C/C	CSHL-HAPMAP	HapMap-CEU	NA07055	CEPH1341.12	r27_ch17_CEU_bcm:genotype_0002
186	ss40844252	C/G	CSHL-HAPMAP	HapMap-CEU	NA06993	CEPH1341.13	r27_ch17_CEU_bcm:genotype_0002
187	ss40844252	C/G	CSHL-HAPMAP	HapMap-CEU	NA06985	CEPH1341.14	r27_ch17_CEU_bcm:genotype_0002
203	ss40844252	C/G	CSHL-HAPMAP	HapMap-CEU	NA07348	CEPH1345.02	r27_ch17_CEU_bcm:genotype_0002
213	ss40844252	C/G	CSHL-HAPMAP	HapMap-CEU	NA07357	CEPH1345.12	r27_ch17_CEU_bcm:genotype_0002
214	ss40844252	C/G	CSHL-HAPMAP	HapMap-CEU	NA07345	CEPH1345.13	r27_ch17_CEU_bcm:genotype_0002
215	ss40844252	C/G	CSHL-HAPMAP	HapMap-CEU	NA10857	CEPH1346.01	r27_ch17_CEU_bcm:genotype_0002
225	ss40844252	C/C	CSHL-HAPMAP	HapMap-CEU	NA12043	CEPH1346.11	r27_ch17_CEU_bcm:genotype_0002
229	ss40844252	C/G	CSHL-HAPMAP	HapMap-CEU	NA10859	CEPH1347.02	r27_ch17_CEU_bcm:genotype_0002
238	ss40844252	C/G	CSHL-HAPMAP	HapMap-CEU	NA11881	CEPH1347.14	r27_ch17_CEU_bcm:genotype_0002
239	ss40844252	C/G	CSHL-HAPMAP	HapMap-CEU	NA11882	CEPH1347.15	r27_ch17_CEU_bcm:genotype_0002
242	ss40844252	C/G	CSHL-HAPMAP	HapMap-CEU	NA10854	CEPH1349.02	r27_ch17_CEU_bcm:genotype_0002
254	ss40844252	C/G	CSHL-HAPMAP	HapMap-CEU	NA10856	CEPH1350.01	r27_ch17_CEU_bcm:genotype_0002
262	ss40844252	C/G	CSHL-HAPMAP	HapMap-CEU	NA11829	CEPH1350.10	r27_ch17_CEU_bcm:genotype_0002
265	ss40844252	C/G	CSHL-HAPMAP	HapMap-CEU	NA11832	CEPH1350.13	r27_ch17_CEU_bcm:genotype_0002
345	ss40844252	C/G	CSHL-HAPMAP	HapMap-CEU	NA12717	CEPH1358.12	r27_ch17_CEU_bcm:genotype_0002
348	ss40844252	C/G	CSHL-HAPMAP	HapMap-CEU	NA10860	CEPH1362.01	r27_ch17_CEU_bcm:genotype_0002
349	ss40844252	C/G	CSHL-HAPMAP	HapMap-CEU	NA10861	CEPH1362.02	r27_ch17_CEU_bcm:genotype_0002
360	ss40844252	C/C	CSHL-HAPMAP	HapMap-CEU	NA11992	CEPH1362.13	r27_ch17_CEU_bcm:genotype_0002
362	ss40844252	C/G	CSHL-HAPMAP	HapMap-CEU	NA11994	CEPH1362.15	r27_ch17_CEU_bcm:genotype_0002
363	ss40844252	C/C	CSHL-HAPMAP	HapMap-CEU	NA11995	CEPH1362.16	r27_ch17_CEU_bcm:genotype_0002
366	ss40844252	C/C	CSHL-HAPMAP	HapMap-CEU	NA10863	CEPH1375.02	r27_ch17_CEU_bcm:genotype_0002
373	ss40844252	C/C	CSHL-HAPMAP	HapMap-CEU	NA12264	CEPH1375.11	r27_ch17_CEU_bcm:genotype_0002
374	ss40844252	C/G	CSHL-HAPMAP	HapMap-CEU	NA12234	CEPH1375.12	r27_ch17_CEU_bcm:genotype_0002
399	ss40844252	C/G	CSHL-HAPMAP	HapMap-CEU	NA10830	CEPH1408.01	r27_ch17_CEU_bcm:genotype_0002
409	ss40844252	C/G	CSHL-HAPMAP	HapMap-CEU	NA12236	CEPH1408.11	r27_ch17_CEU_bcm:genotype_0002
411	ss40844252	C/G	CSHL-HAPMAP	HapMap-CEU	NA12156	CEPH1408.13	r27_ch17_CEU_bcm:genotype_0002
429	ss40844252	C/G	CSHL-HAPMAP	HapMap-CEU	NA10835	CEPH1416.01	r27_ch17_CEU_bcm:genotype_0002
438	ss40844252	C/G	CSHL-HAPMAP	HapMap-CEU	NA12248	CEPH1416.11	r27_ch17_CEU_bcm:genotype_0002
439	ss40844252	C/C	CSHL-HAPMAP	HapMap-CEU	NA12249	CEPH1416.12	r27_ch17_CEU_bcm:genotype_0002
457	ss40844252	C/G	CSHL-HAPMAP	HapMap-CEU	NA10839	CEPH1420.02	r27_ch17_CEU_bcm:genotype_0002
465	ss40844252	C/G	CSHL-HAPMAP	HapMap-CEU	NA12004	CEPH1420.10	r27_ch17_CEU_bcm:genotype_0002
466	ss40844252	C/C	CSHL-HAPMAP	HapMap-CEU	NA12005	CEPH1420.11	r27_ch17_CEU_bcm:genotype_0002
467	ss40844252	C/G	CSHL-HAPMAP	HapMap-CEU	NA12006	CEPH1420.12	r27_ch17_CEU_bcm:genotype_0002
537	ss40844252	C/G	CSHL-HAPMAP	HapMap-CEU	NA12752	CEPH1447.01	r27_ch17_CEU_bcm:genotype_0002
538	ss40844252	C/G	CSHL-HAPMAP	HapMap-CEU	NA12753	CEPH1447.02	r27_ch17_CEU_bcm:genotype_0002
545	ss40844252	C/G	CSHL-HAPMAP	HapMap-CEU	NA12760	CEPH1447.09	r27_ch17_CEU_bcm:genotype_0002
547	ss40844252	C/G	CSHL-HAPMAP	HapMap-CEU	NA12762	CEPH1447.11	r27_ch17_CEU_bcm:genotype_0002
548	ss40844252	C/G	CSHL-HAPMAP	HapMap-CEU	NA12763	CEPH1447.12	r27_ch17_CEU_bcm:genotype_0002
565	ss40844252	C/G	CSHL-HAPMAP	HapMap-CEU	NA12801	CEPH1454.01	r27_ch17_CEU_bcm:genotype_0002
566	ss40844252	C/G	CSHL-HAPMAP	HapMap-CEU	NA12802	CEPH1454.02	r27_ch17_CEU_bcm:genotype_0002
577	ss40844252	C/C	CSHL-HAPMAP	HapMap-CEU	NA12813	CEPH1454.13	r27_ch17_CEU_bcm:genotype_0002
578	ss40844252	C/G	CSHL-HAPMAP	HapMap-CEU	NA12814	CEPH1454.14	r27_ch17_CEU_bcm:genotype_0002
610	ss40844252	C/C	CSHL-HAPMAP	HapMap-CEU	NA12864	CEPH1459.01	r27_ch17_CEU_bcm:genotype_0002
618	ss40844252	C/G	CSHL-HAPMAP	HapMap-CEU	NA12872	CEPH1459.09	r27_ch17_CEU_bcm:genotype_0002
619	ss40844252	C/C	CSHL-HAPMAP	HapMap-CEU	NA12873	CEPH1459.10	r27_ch17_CEU_bcm:genotype_0002
621	ss40844252	C/C	CSHL-HAPMAP	HapMap-CEU	NA12875	CEPH1459.12	r27_ch17_CEU_bcm:genotype_0002
623	ss40844252	C/C	CSHL-HAPMAP	HapMap-CEU	NA12878	CEPH1463.02	r27_ch17_CEU_bcm:genotype_0002
636	ss40844252	C/C	CSHL-HAPMAP	HapMap-CEU	NA12891	CEPH1463.15	r27_ch17_CEU_bcm:genotype_0002
637	ss40844252	C/G	CSHL-HAPMAP	HapMap-CEU	NA12892	CEPH1463.16	r27_ch17_CEU_bcm:genotype_0002
5132	ss40844252	C/G	CSHL-HAPMAP	HapMap-YRI	NA18500	YOR004.01	r27_ch17_YRI_bcm:genotype_0002
5133	ss40844252	C/C	CSHL-HAPMAP	HapMap-YRI	NA18502	YOR004.02	r27_ch17_YRI_bcm:genotype_0002
5134	ss40844252	C/G	CSHL-HAPMAP	HapMap-YRI	NA19127	YOR077.02	r27_ch17_YRI_bcm:genotype_0002
5135	ss40844252	C/G	CSHL-HAPMAP	HapMap-YRI	NA19128	YOR077.03	r27_ch17_YRI_bcm:genotype_0002
5136	ss40844252	C/G	CSHL-HAPMAP	HapMap-YRI	NA19132	YOR101.01	r27_ch17_YRI_bcm:genotype_0002
5137	ss40844252	C/C	CSHL-HAPMAP	HapMap-YRI	NA19131	YOR101.02	r27_ch17_YRI_bcm:genotype_0002
5138	ss40844252	C/G	CSHL-HAPMAP	HapMap-YRI	NA19130	YOR101.03	r27_ch17_YRI_bcm:genotype_0002
5139	ss40844252	C/C	CSHL-HAPMAP	HapMap-YRI	NA19100	YOR105.01	r27_ch17_YRI_bcm:genotype_0002
5141	ss40844252	C/C	CSHL-HAPMAP	HapMap-YRI	NA19098	YOR105.03	r27_ch17_YRI_bcm:genotype_0002
5142	ss40844252	C/G	CSHL-HAPMAP	HapMap-YRI	NA19194	YOR112.01	r27_ch17_YRI_bcm:genotype_0002
5143	ss40844252	C/G	CSHL-HAPMAP	HapMap-YRI	NA19193	YOR112.02	r27_ch17_YRI_bcm:genotype_0002
5145	ss40844252	C/C	CSHL-HAPMAP	HapMap-YRI	NA19240	YOR117.01	r27_ch17_YRI_bcm:genotype_0002
5146	ss40844252	C/G	CSHL-HAPMAP	HapMap-YRI	NA19238	YOR117.02	r27_ch17_YRI_bcm:genotype_0002
5147	ss40844252	C/C	CSHL-HAPMAP	HapMap-YRI	NA19239	YOR117.03	r27_ch17_YRI_bcm:genotype_0002
5149	ss40844252	C/G	CSHL-HAPMAP	HapMap-HCB	NA18524	CH18524	r27_ch17_CHB_bcm:genotype_0002
5151	ss40844252	C/C	CSHL-HAPMAP	HapMap-HCB	NA18558	CH18558	r27_ch17_CHB_bcm:genotype_0002
5153	ss40844252	C/C	CSHL-HAPMAP	HapMap-HCB	NA18561	CH18561	r27_ch17_CHB_bcm:genotype_0002
5156	ss40844252	C/G	CSHL-HAPMAP	HapMap-HCB	NA18603	CH18603	r27_ch17_CHB_bcm:genotype_0002
5157	ss40844252	C/C	CSHL-HAPMAP	HapMap-HCB	NA18540	CH18540	r27_ch17_CHB_bcm:genotype_0002
5158	ss40844252	C/G	CSHL-HAPMAP	HapMap-HCB	NA18605	CH18605	r27_ch17_CHB_bcm:genotype_0002
5163	ss40844252	C/G	CSHL-HAPMAP	HapMap-HCB	NA18609	CH18609	r27_ch17_CHB_bcm:genotype_0002
5165	ss40844252	C/C	CSHL-HAPMAP	HapMap-HCB	NA18608	CH18608	r27_ch17_CHB_bcm:genotype_0002
5167	ss40844252	C/G	CSHL-HAPMAP	HapMap-HCB	NA18611	CH18611	r27_ch17_CHB_bcm:genotype_0002
5168	ss40844252	C/G	CSHL-HAPMAP	HapMap-HCB	NA18555	CH18555	r27_ch17_CHB_bcm:genotype_0002
5169	ss40844252	C/G	CSHL-HAPMAP	HapMap-HCB	NA18564	CH18564	r27_ch17_CHB_bcm:genotype_0002
5172	ss40844252	C/G	CSHL-HAPMAP	HapMap-HCB	NA18570	CH18570	r27_ch17_CHB_bcm:genotype_0002
5173	ss40844252	C/G	CSHL-HAPMAP	HapMap-HCB	NA18612	CH18612	r27_ch17_CHB_bcm:genotype_0002
5175	ss40844252	C/C	CSHL-HAPMAP	HapMap-HCB	NA18620	CH18620	r27_ch17_CHB_bcm:genotype_0002
5177	ss40844252	C/G	CSHL-HAPMAP	HapMap-HCB	NA18594	CH18594	r27_ch17_CHB_bcm:genotype_0002
5178	ss40844252	C/C	CSHL-HAPMAP	HapMap-HCB	NA18622	CH18622	r27_ch17_CHB_bcm:genotype_0002
5179	ss40844252	C/G	CSHL-HAPMAP	HapMap-HCB	NA18573	CH18573	r27_ch17_CHB_bcm:genotype_0002
5180	ss40844252	C/G	CSHL-HAPMAP	HapMap-HCB	NA18623	CH18623	r27_ch17_CHB_bcm:genotype_0002
5181	ss40844252	C/G	CSHL-HAPMAP	HapMap-HCB	NA18576	CH18576	r27_ch17_CHB_bcm:genotype_0002
5183	ss40844252	C/G	CSHL-HAPMAP	HapMap-HCB	NA18624	CH18624	r27_ch17_CHB_bcm:genotype_0002
5185	ss40844252	C/G	CSHL-HAPMAP	HapMap-HCB	NA18632	CH18632	r27_ch17_CHB_bcm:genotype_0002
5187	ss40844252	C/G	CSHL-HAPMAP	HapMap-HCB	NA18633	CH18633	r27_ch17_CHB_bcm:genotype_0002
5188	ss40844252	C/G	CSHL-HAPMAP	HapMap-HCB	NA18635	CH18635	r27_ch17_CHB_bcm:genotype_0002
5190	ss40844252	C/G	CSHL-HAPMAP	HapMap-HCB	NA18636	CH18636	r27_ch17_CHB_bcm:genotype_0002
5195	ss40844252	C/G	CSHL-HAPMAP	HapMap-JPT	NA18951	JA18951	r27_ch17_JPT_bcm:genotype_0002
5197	ss40844252	C/G	CSHL-HAPMAP	HapMap-JPT	NA18947	JA18947	r27_ch17_JPT_bcm:genotype_0002
5198	ss40844252	C/G	CSHL-HAPMAP	HapMap-JPT	NA18944	JA18944	r27_ch17_JPT_bcm:genotype_0002
5199	ss40844252	C/G	CSHL-HAPMAP	HapMap-JPT	NA18945	JA18945	r27_ch17_JPT_bcm:genotype_0002
5200	ss40844252	C/G	CSHL-HAPMAP	HapMap-JPT	NA18949	JA18949	r27_ch17_JPT_bcm:genotype_0002
5203	ss40844252	C/G	CSHL-HAPMAP	HapMap-JPT	NA18956	JA18956	r27_ch17_JPT_bcm:genotype_0002
5204	ss40844252	C/G	CSHL-HAPMAP	HapMap-JPT	NA18964	JA18964	r27_ch17_JPT_bcm:genotype_0002
5207	ss40844252	C/C	CSHL-HAPMAP	HapMap-JPT	NA18959	JA18959	r27_ch17_JPT_bcm:genotype_0002
5208	ss40844252	C/G	CSHL-HAPMAP	HapMap-JPT	NA18969	JA18969	r27_ch17_JPT_bcm:genotype_0002
5211	ss40844252	C/G	CSHL-HAPMAP	HapMap-JPT	NA18972	JA18972	r27_ch17_JPT_bcm:genotype_0002
5213	ss40844252	C/G	CSHL-HAPMAP	HapMap-JPT	NA18973	JA18973	r27_ch17_JPT_bcm:genotype_0002
5214	ss40844252	C/G	CSHL-HAPMAP	HapMap-JPT	NA18966	JA18966	r27_ch17_JPT_bcm:genotype_0002
5215	ss40844252	C/C	CSHL-HAPMAP	HapMap-JPT	NA18975	JA18975	r27_ch17_JPT_bcm:genotype_0002
5218	ss40844252	C/C	CSHL-HAPMAP	HapMap-JPT	NA18978	JA18978	r27_ch17_JPT_bcm:genotype_0002
5221	ss40844252	C/G	CSHL-HAPMAP	HapMap-JPT	NA18995	JA18995	r27_ch17_JPT_bcm:genotype_0002
5222	ss40844252	C/G	CSHL-HAPMAP	HapMap-JPT	NA18981	JA18981	r27_ch17_JPT_bcm:genotype_0002
5225	ss40844252	C/C	CSHL-HAPMAP	HapMap-JPT	NA18987	JA18987	r27_ch17_JPT_bcm:genotype_0002
5227	ss40844252	C/G	CSHL-HAPMAP	HapMap-JPT	NA18991	JA18991	r27_ch17_JPT_bcm:genotype_0002
5232	ss40844252	C/G	CSHL-HAPMAP	HapMap-JPT	NA19000	JA19000	r27_ch17_JPT_bcm:genotype_0002
5235	ss40844252	C/G	CSHL-HAPMAP	HapMap-JPT	NA19007	JA19007	r27_ch17_JPT_bcm:genotype_0002
5238	ss40844252	C/C	CSHL-HAPMAP	HapMap-YRI	NA18503	YOR005.01	r27_ch17_YRI_bcm:genotype_0002
5239	ss40844252	C/G	CSHL-HAPMAP	HapMap-YRI	NA18505	YOR005.02	r27_ch17_YRI_bcm:genotype_0002
5240	ss40844252	C/G	CSHL-HAPMAP	HapMap-YRI	NA18504	YOR005.03	r27_ch17_YRI_bcm:genotype_0002
5241	ss40844252	C/C	CSHL-HAPMAP	HapMap-YRI	NA18506	YOR009.01	r27_ch17_YRI_bcm:genotype_0002
5242	ss40844252	C/G	CSHL-HAPMAP	HapMap-YRI	NA18508	YOR009.02	r27_ch17_YRI_bcm:genotype_0002
5243	ss40844252	C/C	CSHL-HAPMAP	HapMap-YRI	NA18507	YOR009.03	r27_ch17_YRI_bcm:genotype_0002
5244	ss40844252	C/C	CSHL-HAPMAP	HapMap-YRI	NA18860	YOR012.01	r27_ch17_YRI_bcm:genotype_0002
5245	ss40844252	C/C	CSHL-HAPMAP	HapMap-YRI	NA18858	YOR012.02	r27_ch17_YRI_bcm:genotype_0002
5249	ss40844252	C/G	CSHL-HAPMAP	HapMap-YRI	NA18516	YOR013.03	r27_ch17_YRI_bcm:genotype_0002
5250	ss40844252	C/C	CSHL-HAPMAP	HapMap-YRI	NA18521	YOR016.01	r27_ch17_YRI_bcm:genotype_0002
5251	ss40844252	C/C	CSHL-HAPMAP	HapMap-YRI	NA18523	YOR016.02	r27_ch17_YRI_bcm:genotype_0002
5252	ss40844252	C/C	CSHL-HAPMAP	HapMap-YRI	NA18522	YOR016.03	r27_ch17_YRI_bcm:genotype_0002
5253	ss40844252	C/C	CSHL-HAPMAP	HapMap-YRI	NA18872	YOR017.01	r27_ch17_YRI_bcm:genotype_0002
5254	ss40844252	C/G	CSHL-HAPMAP	HapMap-YRI	NA18870	YOR017.02	r27_ch17_YRI_bcm:genotype_0002
5255	ss40844252	C/G	CSHL-HAPMAP	HapMap-YRI	NA18871	YOR017.03	r27_ch17_YRI_bcm:genotype_0002
5256	ss40844252	C/C	CSHL-HAPMAP	HapMap-YRI	NA18854	YOR018.01	r27_ch17_YRI_bcm:genotype_0002
5257	ss40844252	C/C	CSHL-HAPMAP	HapMap-YRI	NA18852	YOR018.02	r27_ch17_YRI_bcm:genotype_0002
5258	ss40844252	C/G	CSHL-HAPMAP	HapMap-YRI	NA18853	YOR018.03	r27_ch17_YRI_bcm:genotype_0002
5262	ss40844252	C/C	CSHL-HAPMAP	HapMap-YRI	NA18863	YOR024.01	r27_ch17_YRI_bcm:genotype_0002
5263	ss40844252	C/G	CSHL-HAPMAP	HapMap-YRI	NA18861	YOR024.02	r27_ch17_YRI_bcm:genotype_0002
5264	ss40844252	C/C	CSHL-HAPMAP	HapMap-YRI	NA18862	YOR024.03	r27_ch17_YRI_bcm:genotype_0002
5265	ss40844252	C/C	CSHL-HAPMAP	HapMap-YRI	NA18914	YOR028.01	r27_ch17_YRI_bcm:genotype_0002
5266	ss40844252	C/G	CSHL-HAPMAP	HapMap-YRI	NA18912	YOR028.02	r27_ch17_YRI_bcm:genotype_0002
5267	ss40844252	C/G	CSHL-HAPMAP	HapMap-YRI	NA18913	YOR028.03	r27_ch17_YRI_bcm:genotype_0002
5268	ss40844252	C/G	CSHL-HAPMAP	HapMap-YRI	NA19094	YOR040.01	r27_ch17_YRI_bcm:genotype_0002
5269	ss40844252	C/C	CSHL-HAPMAP	HapMap-YRI	NA19093	YOR040.02	r27_ch17_YRI_bcm:genotype_0002
5270	ss40844252	C/G	CSHL-HAPMAP	HapMap-YRI	NA19092	YOR040.03	r27_ch17_YRI_bcm:genotype_0002
5271	ss40844252	C/C	CSHL-HAPMAP	HapMap-YRI	NA19103	YOR042.01	r27_ch17_YRI_bcm:genotype_0002
5272	ss40844252	C/C	CSHL-HAPMAP	HapMap-YRI	NA19102	YOR042.02	r27_ch17_YRI_bcm:genotype_0002
5273	ss40844252	C/G	CSHL-HAPMAP	HapMap-YRI	NA19101	YOR042.03	r27_ch17_YRI_bcm:genotype_0002
5274	ss40844252	C/G	CSHL-HAPMAP	HapMap-YRI	NA19139	YOR043.01	r27_ch17_YRI_bcm:genotype_0002
5275	ss40844252	C/G	CSHL-HAPMAP	HapMap-YRI	NA19137	YOR043.02	r27_ch17_YRI_bcm:genotype_0002
5276	ss40844252	C/G	CSHL-HAPMAP	HapMap-YRI	NA19138	YOR043.03	r27_ch17_YRI_bcm:genotype_0002
5277	ss40844252	C/C	CSHL-HAPMAP	HapMap-YRI	NA19202	YOR045.01	r27_ch17_YRI_bcm:genotype_0002
5278	ss40844252	C/G	CSHL-HAPMAP	HapMap-YRI	NA19201	YOR045.02	r27_ch17_YRI_bcm:genotype_0002
5279	ss40844252	C/C	CSHL-HAPMAP	HapMap-YRI	NA19200	YOR045.03	r27_ch17_YRI_bcm:genotype_0002
5280	ss40844252	C/C	CSHL-HAPMAP	HapMap-YRI	NA19173	YOR047.01	r27_ch17_YRI_bcm:genotype_0002
5281	ss40844252	C/C	CSHL-HAPMAP	HapMap-YRI	NA19172	YOR047.02	r27_ch17_YRI_bcm:genotype_0002
5283	ss40844252	C/G	CSHL-HAPMAP	HapMap-YRI	NA19205	YOR048.01	r27_ch17_YRI_bcm:genotype_0002
5284	ss40844252	C/G	CSHL-HAPMAP	HapMap-YRI	NA19204	YOR048.02	r27_ch17_YRI_bcm:genotype_0002
5285	ss40844252	C/C	CSHL-HAPMAP	HapMap-YRI	NA19203	YOR048.03	r27_ch17_YRI_bcm:genotype_0002
5287	ss40844252	C/C	CSHL-HAPMAP	HapMap-YRI	NA19209	YOR050.02	r27_ch17_YRI_bcm:genotype_0002
5288	ss40844252	C/G	CSHL-HAPMAP	HapMap-YRI	NA19210	YOR050.03	r27_ch17_YRI_bcm:genotype_0002
5289	ss40844252	C/C	CSHL-HAPMAP	HapMap-YRI	NA19208	YOR051.01	r27_ch17_YRI_bcm:genotype_0002
5290	ss40844252	C/G	CSHL-HAPMAP	HapMap-YRI	NA19206	YOR051.02	r27_ch17_YRI_bcm:genotype_0002
5291	ss40844252	C/C	CSHL-HAPMAP	HapMap-YRI	NA19207	YOR051.03	r27_ch17_YRI_bcm:genotype_0002
5293	ss40844252	C/C	CSHL-HAPMAP	HapMap-YRI	NA19159	YOR056.02	r27_ch17_YRI_bcm:genotype_0002
5294	ss40844252	C/G	CSHL-HAPMAP	HapMap-YRI	NA19160	YOR056.03	r27_ch17_YRI_bcm:genotype_0002
5296	ss40844252	C/G	CSHL-HAPMAP	HapMap-YRI	NA19222	YOR058.02	r27_ch17_YRI_bcm:genotype_0002
5297	ss40844252	C/G	CSHL-HAPMAP	HapMap-YRI	NA19223	YOR058.03	r27_ch17_YRI_bcm:genotype_0002
5300	ss40844252	C/C	CSHL-HAPMAP	HapMap-YRI	NA19119	YOR060.03	r27_ch17_YRI_bcm:genotype_0002
5302	ss40844252	C/C	CSHL-HAPMAP	HapMap-YRI	NA19140	YOR071.02	r27_ch17_YRI_bcm:genotype_0002
5303	ss40844252	C/C	CSHL-HAPMAP	HapMap-YRI	NA19141	YOR071.03	r27_ch17_YRI_bcm:genotype_0002
5305	ss40844252	C/C	CSHL-HAPMAP	HapMap-YRI	NA19152	YOR072.02	r27_ch17_YRI_bcm:genotype_0002
5307	ss40844252	C/C	CSHL-HAPMAP	HapMap-YRI	NA19145	YOR074.01	r27_ch17_YRI_bcm:genotype_0002
5308	ss40844252	C/G	CSHL-HAPMAP	HapMap-YRI	NA19143	YOR074.02	r27_ch17_YRI_bcm:genotype_0002
5309	ss40844252	C/C	CSHL-HAPMAP	HapMap-YRI	NA19144	YOR074.03	r27_ch17_YRI_bcm:genotype_0002
5310	ss40844252	C/C	CSHL-HAPMAP	HapMap-YRI	NA19129	YOR077.01	r27_ch17_YRI_bcm:genotype_0002

Genotype data submitted for	526	samples from	526	individuals	Individual with multiple genotypes submission:	0

Validation Summary:

Validation status

Marker displays
Mendelian segregation

PCR results confirmed
in multiple reactions

Homozygotes detected
in individual genotype data

DoubleHit found by: BCM_SSAHASNP

UNKNOWN

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Revised: May 25, 2006 1:38 PM .