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Reference SNP(refSNP) Cluster Report: rs17159388          
RefSNP
Organism:human (Homo sapiens)
Molecule Type:Genomic
Created/Updated in build:123/130
Map to Genome Build:36.3
Allele
Variation Class:SNP:
single nucleotide polymorphism
RefSNP Alleles:A/G
Ancestral Allele:G
Clinical Association:unknown
HGVS Names
NM_024552.2:c.356G>A
NP_078828.2:p.Arg119Gln
NT_077812.2:g.924551G>A
Links , Linkout

SNP Details are organized in the following sections:
Submission Fasta Resource GeneView Map Diversity Validation

  Submitter records for this RefSNP Cluster back to top
The submission ss23582548 has the longest flanking sequence of all cluster members and was used to instantiate sequence for rs17159388 during BLAST analysis for the current build.

NCBI
Assay ID		Handle|Submitter IDValidation
Status		ss to rs
Orientation
/Strand		Alleles5' Near Seq 30 bp3' Near Seq 30 bpEntry
Date		Update
Date		Build
Added		Molecule
Type		Freq
Warning		Ancestral
Allele		Success
Rate
ss23582548PERLEGEN|afd1597108byFreqfwd/TA/Gtcacgctgcagcagacccagcgatggttccgagacgccggaaccaggatcgaccccagct08/10/0409/13/04123Genomicunknown
ss67545695ILLUMINA|HumanHap650Yv1.0_rs17159388fwd/TA/Gtcacgctgcagcagacccagcgatggttccgagacgccggaaccaggatcgaccccagct11/14/0611/14/06127Genomicunknown
ss69223654PERLEGEN|PGP01597108byFreqfwd/TA/Gtcacgctgcagcagacccagcgatggttccgagacgccggaaccaggatcgaccccagct01/30/0703/31/08127Genomicunknown
ss71218440ILLUMINA|HumanHap650Yv3.0_rs17159388fwd/TA/Gtcacgctgcagcagacccagcgatggttccgagacgccggaaccaggatcgaccccagct04/23/0704/23/07127Genomicunknown
ss75403677ILLUMINA|ILMN_Human_1M_rs17159388fwd/TA/Gtcacgctgcagcagacccagcgatggttccgagacgccggaaccaggatcgaccccagct08/28/0708/29/07129Genomicunknown

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|rs17159388|allelePos=101|totalLen=201|taxid=9606|snpclass=1|alleles='A/G'|mol=Genomic|build=129
 CCTCTGTGAC CCTTGTCCTC ATCACCCCCT CCCCAGCCCC AGCTGTCTCT CCTGGCCGCC
 CAGTGTGGCC TCACGCTGCA GCAGACCC
 AGCGATGGTT CC
 R
 GAGACGCCGG AA
 CCAGGATCGA CCCCAGCTGA CCAAGAAGTT CTGTGAGGCC AGGTAAGCCC AGGATGGGGC
 TTCTGGGGTG CAGGGAAGCG GGCCGGGG

  GeneView back to top

GeneView via analysis of contig annotation:  

View more variation on this gene (click to hide).
Include clinically associated: in gene region cSNP has frequency double hit
Assembly SNP to Chr Chr Chr position Contig Contig position Allele
Function mRNA Protein
mRNA to Chr Accession Position Allele change Accession Position Residue change
on assembly: is labeled at position on chromosome .

GeneView via analysis of contig annotation: N/A.

GeneView via direct blast against RefSeq sequences (used when no gene model is available):

Function Chr mRNA Protein
SNP to mRNA Accession Position Allele change Accession Position Residue change
on assembly: is labeled at position on chromosome .

GeneView via direct blast against RefSeq sequences (used when no gene model is available): N/A


  Integrated Maps: back to top
Genome Build Chr Chr Pos Contig Contig Pos SNP to
Chr		 Contig
allele		 Group term Group label Contig label Neighbor
SNP		 Map Method
doesn't map to any assembly.

  NCBI Resource Links back to top
Resource
Submitter-Referenced
GenBank
NC_000019.8
dbSNP Blast Analysis
UniGene Cluster ID
515111

  Population Diversity back to top

Sample AscertainmentGenotype Detailnew.gifAlleles
ss# Population Individual
Group		 Chrom.
Sample Cnt.
 Source A/A
 A/G
 G/G
 HWP A
 G
ss23582548 AFD_EUR_PANEL European 48 IG 1.000 1.000
AFD_AFR_PANEL African American 46 IG 0.043 0.174 0.783 0.273 0.130 0.870
AFD_CHN_PANEL Asian 48 IG 0.250 0.750 0.527 0.125 0.875
HapMap-CEU European 110 IG 0.036 0.964 1.000 0.018 0.982
HapMap-HCB Asian 84 IG 0.024 0.214 0.762 0.752 0.131 0.869
HapMap-JPT Asian 88 IG 0.182 0.818 0.091 0.909
HapMap-YRI Sub-Saharan African 120 IG 0.050 0.300 0.650 0.655 0.200 0.800
ss69223654 HapMap-CEU European 120 GF 0.017 0.367 0.617 0.200 0.800
HapMap-HCB Asian 88 GF 0.068 0.636 0.295 0.386 0.614
HapMap-JPT Asian 90 GF 0.089 0.533 0.378 0.356 0.644
HapMap-YRI Sub-Saharan African 120 GF 0.167 0.650 0.183 0.492 0.508
Concordant Genotype Total Sample A/A A/G G/G
ss23582548 1144 24 237 866
RefSNP Genotype Summary Total Individual A/A A/G G/G
rs17159388 1263 24 237 866
Discordant Genotypes:
Indiviudal
SampleID		 SubSNP(ss) Genotype Population
Handle		 Submitter
Population		 Submitter
SampleID		 SampleID
Alias		 Submission
Batch		 NCBI
ProbeID
158 ss23582548 G/G CSHL-HAPMAP HapMap-CEU NA12145 CEPH1334.11 r27_ch19_CEU_illumina:human_1m_beadchip 5636985
159 ss23582548 G/G CSHL-HAPMAP HapMap-CEU NA12146 CEPH1334.12 r27_ch19_CEU_illumina:human_1m_beadchip 5636985
161 ss23582548 G/G CSHL-HAPMAP HapMap-CEU NA07029 CEPH1340.01 r27_ch19_CEU_illumina:human_1m_beadchip 5636985
162 ss23582548 G/G PERLEGEN AFD_EUR_PANEL NA07019 71_IND_CHR_19 5636985
162 ss23582548 N/N CSHL-HAPMAP HapMap-CEU NA07019 CEPH1340.02 r27_ch19_CEU_illumina:human_1m_beadchip 5636985
169 ss23582548 G/G CSHL-HAPMAP HapMap-CEU NA06994 CEPH1340.09 r27_ch19_CEU_illumina:human_1m_beadchip 5636985
170 ss23582548 G/G CSHL-HAPMAP HapMap-CEU NA07000 CEPH1340.10 r27_ch19_CEU_illumina:human_1m_beadchip 5636985
171 ss23582548 G/G CSHL-HAPMAP HapMap-CEU NA07022 CEPH1340.11 r27_ch19_CEU_illumina:human_1m_beadchip 5636985
186 ss23582548 G/G CSHL-HAPMAP HapMap-CEU NA06993 CEPH1341.13 r27_ch19_CEU_illumina:human_1m_beadchip 5636985
199 ss23582548 G/G CSHL-HAPMAP HapMap-CEU NA12056 CEPH1344.12 r27_ch19_CEU_illumina:human_1m_beadchip 5636985
213 ss23582548 G/G CSHL-HAPMAP HapMap-CEU NA07357 CEPH1345.12 r27_ch19_CEU_illumina:human_1m_beadchip 5636985
225 ss23582548 G/G CSHL-HAPMAP HapMap-CEU NA12043 CEPH1346.11 r27_ch19_CEU_illumina:human_1m_beadchip 5636985
226 ss23582548 G/G CSHL-HAPMAP HapMap-CEU NA12044 CEPH1346.12 r27_ch19_CEU_illumina:human_1m_beadchip 5636985
238 ss23582548 G/G CSHL-HAPMAP HapMap-CEU NA11881 CEPH1347.14 r27_ch19_CEU_illumina:human_1m_beadchip 5636985
239 ss23582548 G/G CSHL-HAPMAP HapMap-CEU NA11882 CEPH1347.15 r27_ch19_CEU_illumina:human_1m_beadchip 5636985
255 ss23582548 G/G CSHL-HAPMAP HapMap-CEU NA10855 CEPH1350.02 r27_ch19_CEU_illumina:human_1m_beadchip 5636985
335 ss23582548 G/G CSHL-HAPMAP HapMap-CEU NA12707 CEPH1358.01 r27_ch19_CEU_illumina:human_1m_beadchip 5636985
345 ss23582548 N/N CSHL-HAPMAP HapMap-CEU NA12717 CEPH1358.12 r27_ch19_CEU_illumina:human_1m_beadchip 5636985
348 ss23582548 G/G PERLEGEN AFD_EUR_PANEL NA10860 71_IND_CHR_19 5636985
348 ss23582548 N/N CSHL-HAPMAP HapMap-CEU NA10860 CEPH1362.01 r27_ch19_CEU_illumina:human_1m_beadchip 5636985
349 ss23582548 G/G PERLEGEN AFD_EUR_PANEL NA10861 71_IND_CHR_19 5636985
349 ss23582548 G/G CSHL-HAPMAP HapMap-CEU NA10861 CEPH1362.02 r27_ch19_CEU_illumina:human_1m_beadchip 5636985
439 ss23582548 G/G CSHL-HAPMAP HapMap-CEU NA12249 CEPH1416.12 r27_ch19_CEU_illumina:human_1m_beadchip 5636985
464 ss23582548 A/G CSHL-HAPMAP HapMap-CEU NA12003 CEPH1420.09 r27_ch19_CEU_illumina:human_1m_beadchip 5636985
465 ss23582548 N/N CSHL-HAPMAP HapMap-CEU NA12004 CEPH1420.10 r27_ch19_CEU_illumina:human_1m_beadchip 5636985
524 ss23582548 G/G CSHL-HAPMAP HapMap-CEU NA12740 CEPH1444.02 r27_ch19_CEU_illumina:human_1m_beadchip 5636985
577 ss23582548 G/G CSHL-HAPMAP HapMap-CEU NA12813 CEPH1454.13 r27_ch19_CEU_illumina:human_1m_beadchip 5636985
618 ss23582548 G/G CSHL-HAPMAP HapMap-CEU NA12872 CEPH1459.09 r27_ch19_CEU_illumina:human_1m_beadchip 5636985
5135 ss23582548 G/G CSHL-HAPMAP HapMap-YRI NA19128 YOR077.03 r27_ch19_YRI_illumina:human_1m_beadchip 5636985
5137 ss23582548 G/G CSHL-HAPMAP HapMap-YRI NA19131 YOR101.02 r27_ch19_YRI_illumina:human_1m_beadchip 5636985
5138 ss23582548 G/G CSHL-HAPMAP HapMap-YRI NA19130 YOR101.03 r27_ch19_YRI_illumina:human_1m_beadchip 5636985
5139 ss23582548 N/N CSHL-HAPMAP HapMap-YRI NA19100 YOR105.01 r27_ch19_YRI_illumina:human_1m_beadchip 5636985
5140 ss23582548 G/G CSHL-HAPMAP HapMap-YRI NA19099 YOR105.02 r27_ch19_YRI_illumina:human_1m_beadchip 5636985
5142 ss23582548 G/G CSHL-HAPMAP HapMap-YRI NA19194 YOR112.01 r27_ch19_YRI_illumina:human_1m_beadchip 5636985
5144 ss23582548 G/G CSHL-HAPMAP HapMap-YRI NA19192 YOR112.03 r27_ch19_YRI_illumina:human_1m_beadchip 5636985
5145 ss23582548 G/G CSHL-HAPMAP HapMap-YRI NA19240 YOR117.01 r27_ch19_YRI_illumina:human_1m_beadchip 5636985
5149 ss23582548 A/G CSHL-HAPMAP HapMap-HCB NA18524 CH18524 r27_ch19_CHB_illumina:human_1m_beadchip 5636985
5150 ss23582548 G/G CSHL-HAPMAP HapMap-HCB NA18529 CH18529 r27_ch19_CHB_illumina:human_1m_beadchip 5636985
5152 ss23582548 G/G CSHL-HAPMAP HapMap-HCB NA18532 CH18532 r27_ch19_CHB_illumina:human_1m_beadchip 5636985
5154 ss23582548 G/G CSHL-HAPMAP HapMap-HCB NA18562 CH18562 r27_ch19_CHB_illumina:human_1m_beadchip 5636985
5156 ss23582548 G/G CSHL-HAPMAP HapMap-HCB NA18603 CH18603 r27_ch19_CHB_illumina:human_1m_beadchip 5636985
5158 ss23582548 G/G CSHL-HAPMAP HapMap-HCB NA18605 CH18605 r27_ch19_CHB_illumina:human_1m_beadchip 5636985
5161 ss23582548 G/G CSHL-HAPMAP HapMap-HCB NA18572 CH18572 r27_ch19_CHB_illumina:human_1m_beadchip 5636985
5163 ss23582548 G/G CSHL-HAPMAP HapMap-HCB NA18609 CH18609 r27_ch19_CHB_illumina:human_1m_beadchip 5636985
5164 ss23582548 G/G CSHL-HAPMAP HapMap-HCB NA18550 CH18550 r27_ch19_CHB_illumina:human_1m_beadchip 5636985
5165 ss23582548 G/G CSHL-HAPMAP HapMap-HCB NA18608 CH18608 r27_ch19_CHB_illumina:human_1m_beadchip 5636985
5168 ss23582548 G/G CSHL-HAPMAP HapMap-HCB NA18555 CH18555 r27_ch19_CHB_illumina:human_1m_beadchip 5636985
5169 ss23582548 G/G CSHL-HAPMAP HapMap-HCB NA18564 CH18564 r27_ch19_CHB_illumina:human_1m_beadchip 5636985
5170 ss23582548 G/G CSHL-HAPMAP HapMap-HCB NA18566 CH18566 r27_ch19_CHB_illumina:human_1m_beadchip 5636985
5171 ss23582548 G/G CSHL-HAPMAP HapMap-HCB NA18563 CH18563 r27_ch19_CHB_illumina:human_1m_beadchip 5636985
5173 ss23582548 G/G CSHL-HAPMAP HapMap-HCB NA18612 CH18612 r27_ch19_CHB_illumina:human_1m_beadchip 5636985
5175 ss23582548 G/G CSHL-HAPMAP HapMap-HCB NA18620 CH18620 r27_ch19_CHB_illumina:human_1m_beadchip 5636985
5176 ss23582548 G/G CSHL-HAPMAP HapMap-HCB NA18621 CH18621 r27_ch19_CHB_illumina:human_1m_beadchip 5636985
5179 ss23582548 G/G CSHL-HAPMAP HapMap-HCB NA18573 CH18573 r27_ch19_CHB_illumina:human_1m_beadchip 5636985
5182 ss23582548 G/G CSHL-HAPMAP HapMap-HCB NA18577 CH18577 r27_ch19_CHB_illumina:human_1m_beadchip 5636985
5186 ss23582548 A/A CSHL-HAPMAP HapMap-HCB NA18582 CH18582 r27_ch19_CHB_illumina:human_1m_beadchip 5636985
5188 ss23582548 A/G CSHL-HAPMAP HapMap-HCB NA18635 CH18635 r27_ch19_CHB_illumina:human_1m_beadchip 5636985
5191 ss23582548 G/G CSHL-HAPMAP HapMap-HCB NA18593 CH18593 r27_ch19_CHB_illumina:human_1m_beadchip 5636985
5194 ss23582548 G/G CSHL-HAPMAP HapMap-JPT NA18940 JA18940 r27_ch19_JPT_illumina:human_1m_beadchip 5636985
5195 ss23582548 G/G CSHL-HAPMAP HapMap-JPT NA18951 JA18951 r27_ch19_JPT_illumina:human_1m_beadchip 5636985
5197 ss23582548 G/G CSHL-HAPMAP HapMap-JPT NA18947 JA18947 r27_ch19_JPT_illumina:human_1m_beadchip 5636985
5198 ss23582548 G/G CSHL-HAPMAP HapMap-JPT NA18944 JA18944 r27_ch19_JPT_illumina:human_1m_beadchip 5636985
5203 ss23582548 G/G CSHL-HAPMAP HapMap-JPT NA18956 JA18956 r27_ch19_JPT_illumina:human_1m_beadchip 5636985
5205 ss23582548 G/G CSHL-HAPMAP HapMap-JPT NA18953 JA18953 r27_ch19_JPT_illumina:human_1m_beadchip 5636985
5207 ss23582548 G/G CSHL-HAPMAP HapMap-JPT NA18959 JA18959 r27_ch19_JPT_illumina:human_1m_beadchip 5636985
5208 ss23582548 G/G CSHL-HAPMAP HapMap-JPT NA18969 JA18969 r27_ch19_JPT_illumina:human_1m_beadchip 5636985
5209 ss23582548 G/G CSHL-HAPMAP HapMap-JPT NA18960 JA18960 r27_ch19_JPT_illumina:human_1m_beadchip 5636985
5211 ss23582548 G/G CSHL-HAPMAP HapMap-JPT NA18972 JA18972 r27_ch19_JPT_illumina:human_1m_beadchip 5636985
5213 ss23582548 G/G CSHL-HAPMAP HapMap-JPT NA18973 JA18973 r27_ch19_JPT_illumina:human_1m_beadchip 5636985
5214 ss23582548 G/G CSHL-HAPMAP HapMap-JPT NA18966 JA18966 r27_ch19_JPT_illumina:human_1m_beadchip 5636985
5215 ss23582548 G/G CSHL-HAPMAP HapMap-JPT NA18975 JA18975 r27_ch19_JPT_illumina:human_1m_beadchip 5636985
5220 ss23582548 G/G CSHL-HAPMAP HapMap-JPT NA18980 JA18980 r27_ch19_JPT_illumina:human_1m_beadchip 5636985
5221 ss23582548 G/G CSHL-HAPMAP HapMap-JPT NA18995 JA18995 r27_ch19_JPT_illumina:human_1m_beadchip 5636985
5223 ss23582548 G/G CSHL-HAPMAP HapMap-JPT NA18971 JA18971 r27_ch19_JPT_illumina:human_1m_beadchip 5636985
5225 ss23582548 G/G CSHL-HAPMAP HapMap-JPT NA18987 JA18987 r27_ch19_JPT_illumina:human_1m_beadchip 5636985
5226 ss23582548 G/G CSHL-HAPMAP HapMap-JPT NA18990 JA18990 r27_ch19_JPT_illumina:human_1m_beadchip 5636985
5235 ss23582548 A/G CSHL-HAPMAP HapMap-JPT NA19007 JA19007 r27_ch19_JPT_illumina:human_1m_beadchip 5636985
5237 ss23582548 G/G CSHL-HAPMAP HapMap-YRI NA18501 YOR004.03 r27_ch19_YRI_illumina:human_1m_beadchip 5636985
5238 ss23582548 G/G CSHL-HAPMAP HapMap-YRI NA18503 YOR005.01 r27_ch19_YRI_illumina:human_1m_beadchip 5636985
5240 ss23582548 G/G CSHL-HAPMAP HapMap-YRI NA18504 YOR005.03 r27_ch19_YRI_illumina:human_1m_beadchip 5636985
5241 ss23582548 G/G CSHL-HAPMAP HapMap-YRI NA18506 YOR009.01 r27_ch19_YRI_illumina:human_1m_beadchip 5636985
5242 ss23582548 G/G CSHL-HAPMAP HapMap-YRI NA18508 YOR009.02 r27_ch19_YRI_illumina:human_1m_beadchip 5636985
5243 ss23582548 G/G CSHL-HAPMAP HapMap-YRI NA18507 YOR009.03 r27_ch19_YRI_illumina:human_1m_beadchip 5636985
5244 ss23582548 A/G CSHL-HAPMAP HapMap-YRI NA18860 YOR012.01 r27_ch19_YRI_illumina:human_1m_beadchip 5636985
5245 ss23582548 G/G CSHL-HAPMAP HapMap-YRI NA18858 YOR012.02 r27_ch19_YRI_illumina:human_1m_beadchip 5636985
5247 ss23582548 G/G CSHL-HAPMAP HapMap-YRI NA18515 YOR013.01 r27_ch19_YRI_illumina:human_1m_beadchip 5636985
5248 ss23582548 G/G CSHL-HAPMAP HapMap-YRI NA18517 YOR013.02 r27_ch19_YRI_illumina:human_1m_beadchip 5636985
5249 ss23582548 G/G CSHL-HAPMAP HapMap-YRI NA18516 YOR013.03 r27_ch19_YRI_illumina:human_1m_beadchip 5636985
5254 ss23582548 G/G CSHL-HAPMAP HapMap-YRI NA18870 YOR017.02 r27_ch19_YRI_illumina:human_1m_beadchip 5636985
5256 ss23582548 G/G CSHL-HAPMAP HapMap-YRI NA18854 YOR018.01 r27_ch19_YRI_illumina:human_1m_beadchip 5636985
5257 ss23582548 G/G CSHL-HAPMAP HapMap-YRI NA18852 YOR018.02 r27_ch19_YRI_illumina:human_1m_beadchip 5636985
5259 ss23582548 A/G CSHL-HAPMAP HapMap-YRI NA18857 YOR023.01 r27_ch19_YRI_illumina:human_1m_beadchip 5636985
5260 ss23582548 A/A CSHL-HAPMAP HapMap-YRI NA18855 YOR023.02 r27_ch19_YRI_illumina:human_1m_beadchip 5636985
5261 ss23582548 N/N CSHL-HAPMAP HapMap-YRI NA18856 YOR023.03 r27_ch19_YRI_illumina:human_1m_beadchip 5636985
5262 ss23582548 G/G CSHL-HAPMAP HapMap-YRI NA18863 YOR024.01 r27_ch19_YRI_illumina:human_1m_beadchip 5636985
5263 ss23582548 G/G CSHL-HAPMAP HapMap-YRI NA18861 YOR024.02 r27_ch19_YRI_illumina:human_1m_beadchip 5636985
5265 ss23582548 G/G CSHL-HAPMAP HapMap-YRI NA18914 YOR028.01 r27_ch19_YRI_illumina:human_1m_beadchip 5636985
5266 ss23582548 A/G CSHL-HAPMAP HapMap-YRI NA18912 YOR028.02 r27_ch19_YRI_illumina:human_1m_beadchip 5636985
5267 ss23582548 G/G CSHL-HAPMAP HapMap-YRI NA18913 YOR028.03 r27_ch19_YRI_illumina:human_1m_beadchip 5636985
5268 ss23582548 G/G CSHL-HAPMAP HapMap-YRI NA19094 YOR040.01 r27_ch19_YRI_illumina:human_1m_beadchip 5636985
5269 ss23582548 G/G CSHL-HAPMAP HapMap-YRI NA19093 YOR040.02 r27_ch19_YRI_illumina:human_1m_beadchip 5636985
5271 ss23582548 G/G CSHL-HAPMAP HapMap-YRI NA19103 YOR042.01 r27_ch19_YRI_illumina:human_1m_beadchip 5636985
5273 ss23582548 G/G CSHL-HAPMAP HapMap-YRI NA19101 YOR042.03 r27_ch19_YRI_illumina:human_1m_beadchip 5636985
5274 ss23582548 G/G CSHL-HAPMAP HapMap-YRI NA19139 YOR043.01 r27_ch19_YRI_illumina:human_1m_beadchip 5636985
5275 ss23582548 G/G CSHL-HAPMAP HapMap-YRI NA19137 YOR043.02 r27_ch19_YRI_illumina:human_1m_beadchip 5636985
5276 ss23582548 G/G CSHL-HAPMAP HapMap-YRI NA19138 YOR043.03 r27_ch19_YRI_illumina:human_1m_beadchip 5636985
5279 ss23582548 G/G CSHL-HAPMAP HapMap-YRI NA19200 YOR045.03 r27_ch19_YRI_illumina:human_1m_beadchip 5636985
5284 ss23582548 A/G CSHL-HAPMAP HapMap-YRI NA19204 YOR048.02 r27_ch19_YRI_illumina:human_1m_beadchip 5636985
5285 ss23582548 G/G CSHL-HAPMAP HapMap-YRI NA19203 YOR048.03 r27_ch19_YRI_illumina:human_1m_beadchip 5636985
5286 ss23582548 G/G CSHL-HAPMAP HapMap-YRI NA19211 YOR050.01 r27_ch19_YRI_illumina:human_1m_beadchip 5636985
5289 ss23582548 A/G CSHL-HAPMAP HapMap-YRI NA19208 YOR051.01 r27_ch19_YRI_illumina:human_1m_beadchip 5636985
5290 ss23582548 A/A CSHL-HAPMAP HapMap-YRI NA19206 YOR051.02 r27_ch19_YRI_illumina:human_1m_beadchip 5636985
5291 ss23582548 G/G CSHL-HAPMAP HapMap-YRI NA19207 YOR051.03 r27_ch19_YRI_illumina:human_1m_beadchip 5636985
5292 ss23582548 G/G CSHL-HAPMAP HapMap-YRI NA19161 YOR056.01 r27_ch19_YRI_illumina:human_1m_beadchip 5636985
5293 ss23582548 A/G CSHL-HAPMAP HapMap-YRI NA19159 YOR056.02 r27_ch19_YRI_illumina:human_1m_beadchip 5636985
5294 ss23582548 G/G CSHL-HAPMAP HapMap-YRI NA19160 YOR056.03 r27_ch19_YRI_illumina:human_1m_beadchip 5636985
5296 ss23582548 G/G CSHL-HAPMAP HapMap-YRI NA19222 YOR058.02 r27_ch19_YRI_illumina:human_1m_beadchip 5636985
5299 ss23582548 A/A CSHL-HAPMAP HapMap-YRI NA19116 YOR060.02 r27_ch19_YRI_illumina:human_1m_beadchip 5636985
5301 ss23582548 G/G CSHL-HAPMAP HapMap-YRI NA19142 YOR071.01 r27_ch19_YRI_illumina:human_1m_beadchip 5636985
5302 ss23582548 A/G CSHL-HAPMAP HapMap-YRI NA19140 YOR071.02 r27_ch19_YRI_illumina:human_1m_beadchip 5636985
5303 ss23582548 G/G CSHL-HAPMAP HapMap-YRI NA19141 YOR071.03 r27_ch19_YRI_illumina:human_1m_beadchip 5636985
5307 ss23582548 N/N CSHL-HAPMAP HapMap-YRI NA19145 YOR074.01 r27_ch19_YRI_illumina:human_1m_beadchip 5636985
5309 ss23582548 G/G CSHL-HAPMAP HapMap-YRI NA19144 YOR074.03 r27_ch19_YRI_illumina:human_1m_beadchip 5636985
6331 ss23582548 N/N CSHL-HAPMAP HapMap-JPT NA19012 JA19012 r27_ch19_JPT_illumina:human_1m_beadchip 5636985
Genotype data submitted for1278 samples from1263 individualsIndividual with multiple genotypes submission:15

  Validation Summary: back to top
Validation status Marker displays
Mendelian segregation		 PCR results confirmed
in multiple reactions		 Homozygotes detected
in individual genotype data
byClusterbyFreqwithHapMapFreq UNKNOWN UNKNOWN UNKNOWN

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Revised: May 25, 2006 1:38 PM .