Reference SNP(refSNP) Cluster Report: rs1062557

Reference SNP(refSNP) Cluster Report: rs1062557

RefSNP
Organism:	human (Homo sapiens)
Molecule Type:	Genomic
Created/Updated in build:	86/130
Map to Genome Build:	36.3

Allele
Variation Class:	SNP: single nucleotide polymorphism
RefSNP Alleles:	A/C
Ancestral Allele:	C
Clinical Association:	unknown

HGVS Names
NM_001012512.1:c.10C>A
NM_001012513.1:c.10C>A
NM_002091.3:c.10C>A
NP_001012530.1:p.Arg4Ser
NP_001012531.1:p.Arg4Ser
NP_002082.2:p.Arg4Ser
NT_025028.13:g.4678353C>A

Links

, Linkout

SNP Details are organized in the following sections:

Submitter records for this RefSNP Cluster

The submission ss44144118 has the longest flanking sequence of all cluster members and was used to instantiate sequence for rs1062557 during BLAST analysis for the current build.

NCBI Assay ID	Handle\|Submitter ID	ss to rs Orientation /Strand	Alleles	5' Near Seq 30 bp	3' Near Seq 30 bp	Entry Date	Update Date	Build Added	Molecule Type	Success Rate
ss1548680	LEE\|1009792	fwd/T	A/C	caagggcttcccgtcgggaccatgcgcggc	gtgagctcccgctggtcctgctggcgctgg	09/13/00	10/10/03	86	cDNA	unknown
ss3198340	YUSUKE\|IMS-JST014262	rev/B	G/T	ccagcgccagcaggaccagcgggagctcac	gccgcgcatggtcccgacgggaagcccttg	08/07/01	10/10/03	98	Genomic	unknown
ss10910226	BCM_SSAHASNP\|chr18.NT_025028.13_4678353	fwd/T	A/C	caagggcttcccgtcgggaccatgcgcggc	gtgagctcccgctggtcctgctggcgctgg	06/30/03	10/25/06	116	Genomic	unknown
ss14406776	WI_SSAHASNP\|chr18.NT_025028.13_4678353	fwd/T	A/C	caagggcttcccgtcgggaccatgcgcggc	gtgagctcccgctggtcctgctggcgctgg	11/05/03	11/22/03	119	Genomic	unknown
ss16254627	CGAP-GAI\|1508957	fwd/T	A/C	caagggcttcccgtcgggaccatgcgcggc	gtgagctcccgctggtcctgctggcgctgg	11/18/03	11/22/03	120	cDNA	unknown
ss24203977	PERLEGEN\|afd4172566	fwd/T	A/C	caagggcttcccgtcgggaccatgcgcggc	gtgagctcccgctggtcctgctggcgctgg	08/10/04	09/13/04	123	Genomic	unknown
ss44144118	ABI\|hCV8688723	fwd/T	A/C	caagggcttcccgtcgggaccatgcgcggc	gtgagctcccgctggtcctgctggcgctgg	07/18/05	11/03/06	126	Genomic	unknown
ss48427388	APPLERA_GI\|hCV8688723	fwd/T	A/C	caagggcttcccgtcgggaccatgcgcggc	gtgagctcccgctggtcctgctggcgctgg	09/28/05	11/03/06	126	Genomic	unknown
ss69216364	PERLEGEN\|PGP04172566	fwd/T	A/C	caagggcttcccgtcgggaccatgcgcggc	gtgagctcccgctggtcctgctggcgctgg	01/30/07	08/14/07	127	Genomic	unknown
ss74901604	ILLUMINA\|ILMN_Human_1M_rs1062557	fwd/T	A/C	caagggcttcccgtcgggaccatgcgcggc	gtgagctcccgctggtcctgctggcgctgg	08/28/07	08/29/07	129	Genomic	unknown
ss85043212	HGSV\|Cor19240_SNV_20070510.chr18_55038487	fwd/T	A/C	caagggcttcccgtcgggaccatgcgcggc	gtgagctcccgctggtcctgctggcgctgg	11/30/07	12/08/07	130	Genomic	unknown
ss90812721	BCMHGSC_JDW\|JWB-1108223	fwd/T	A/C	caagggcttcccgtcgggaccatgcgcggc	gtgagctcccgctggtcctgctggcgctgg	02/26/08	03/01/08	129	Genomic	unknown
ss96516271	HUMANGENOME_JCVI\|1103645211975	fwd/T	A/C	caagggcttcccgtcgggaccatgcgcggc	gtgagctcccgctggtcctgctggcgctgg	03/26/08	03/26/08	130	Genomic	unknown
ss106550002	BGI\|BGI_rs1062557	fwd/T	A/C	caagggcttcccgtcgggaccatgcgcggc	gtgagctcccgctggtcctgctggcgctgg	09/15/08	06/19/09	130	Genomic	unknown

Fasta sequence (Legend)

 GGGGGCAATG TACACTCAGC CTTTTCATCA CTCGGCGGGG AGATGGATGG TTTTCCGGAC
 CGGGCGTCCC AGCGCCCCGG TTAGCTATAG GGAGACGTCA GAGCGCTCTG GTCCGCGATA
 GAAGAGCCCC CCAGCCCCCC CGCCCGGGCT TCCATATAAA GTAGGGGCCC TAGTGGAGGC
 CGCAGCAGTA GCACCAGCGG CTGCGGCGGC GGAGCTCCTC CGAGGTCCGG GTCACCAGTC
 TCTGCTCTTC CCAGCCTCTC CGGCGCGCTC CAAGGGCTTC CCGTCGGGAC CATGCGCGGC
 M
 GTGAGCTCCC GCTGGTCCTG CTGGCGCTGG TCCTCTGCCT GGCGCCCCGG GGGCGAGCGG
 TCCCGCTGCC TGCGGGCGGA GGGACCGTGC TGACCAAGAT GTACCCGCGC GGCAACCACT
 GGGCGGTGGG TGAGTGTCCT GGCCGCGGGA GCCGCGCGCT TGTCCTCCTC TGGATCAGCC
 AGCCGGAGGG GACCTGTCTC CCCATTTCTT TGCGTTTCCC TGGCCCAGCT TTGGGAGCTG
 GGTTTGTTGT GACCTTTCTA TCGGCAAACA CCTTCCCCGT TCTCCTAAAA CTCCACCCCA

GeneView

GeneView via analysis of contig annotation:

View more variation on this gene (click to hide).

Assembly	SNP to Chr	Chr	Chr position	Contig	Contig position	Allele

Function	mRNA				Protein
Function	mRNA to Chr	Accession	Position	Allele change	Accession	Position	Residue change

GeneView via analysis of contig annotation: N/A.

GeneView via direct blast against RefSeq sequences (used when no gene model is available):

Function	Chr	mRNA				Protein
Function	Chr	SNP to mRNA	Accession	Position	Allele change	Accession	Position	Residue change

GeneView via direct blast against RefSeq sequences (used when no gene model is available): N/A

Integrated Maps:

Genome Build	Chr	Chr Pos	Contig	Contig Pos	SNP to Chr	Contig allele	Group term	Group label	Contig label	Neighbor SNP	Map Method

doesn't map to any assembly.

NCBI Resource Links

Resource

Submitter-Referenced
GenBank
S67384 ABBA01056164 BI964898 Hs.1473

dbSNP Blast Analysis

UniGene Cluster ID
153444

Population Diversity

	Sample Ascertainment				Genotype Detail				Alleles
ss#	Population	Individual Group	Chrom. Sample Cnt.	Source	A/A	A/C	C/C	HWP	A	C
ss10910226	CEPH		186	AF					0.990	0.010

ss24203977	AFD_EUR_PANEL	European	48	IG	0.583	0.417		0.200	0.792	0.208

	AFD_AFR_PANEL	African American	46	IG	0.652	0.348		0.317	0.826	0.174

	AFD_CHN_PANEL	Asian	48	IG	0.458	0.458	0.083	0.752	0.688	0.312

ss3198340	JBIC-allele		1488	AF					0.812	0.188

ss44144118	HapMap-CEU	European	120	IG	0.650	0.300	0.050	0.655	0.800	0.200

	HapMap-HCB	Asian	86	IG	0.558	0.349	0.093	0.479	0.733	0.267

	HapMap-JPT	Asian	90	IG	0.600	0.356	0.044	1.000	0.778	0.222

	HapMap-YRI	Sub-Saharan African	118	IG	0.576	0.373	0.051	1.000	0.763	0.237

ss48427388	AGI_ASP population	multiple	78	IG	0.436	0.487	0.077	0.479	0.679	0.321

ss69216364	HapMap-CEU	European	120	GF		1.000			0.500	0.500

	HapMap-HCB	Asian	90	GF		1.000			0.500	0.500

	HapMap-JPT	Asian	88	GF		1.000			0.500	0.500

	HapMap-YRI	Sub-Saharan African	120	GF		1.000			0.500	0.500

Concordant Genotype	Total Sample	A/A	A/C	C/C
ss24203977	67	36	29	2
ss44144118	1031	475	464	70
ss48427388	39	17	19	3
ss96516271	1		1

RefSNP Genotype Summary	Total Individual	A/A	A/C	C/C
rs1062557	1303	524	508	75

Discordant Genotypes:
Indiviudal SampleID	SubSNP(ss)	Genotype	Population Handle	Submitter Population	Submitter SampleID	SampleID Alias	Submission Batch	NCBI ProbeID
150	ss44144118	A/A	CSHL-HAPMAP	HapMap-CEU	NA10846	CEPH1334.01	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
151	ss44144118	A/A	CSHL-HAPMAP	HapMap-CEU	NA10847	CEPH1334.02	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
157	ss44144118	A/A	CSHL-HAPMAP	HapMap-CEU	NA12144	CEPH1334.10	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
158	ss44144118	A/A	CSHL-HAPMAP	HapMap-CEU	NA12145	CEPH1334.11	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
159	ss44144118	A/A	CSHL-HAPMAP	HapMap-CEU	NA12146	CEPH1334.12	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
160	ss44144118	A/A	CSHL-HAPMAP	HapMap-CEU	NA12239	CEPH1334.13	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
170	ss44144118	A/A	CSHL-HAPMAP	HapMap-CEU	NA07000	CEPH1340.10	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
171	ss44144118	A/A	CSHL-HAPMAP	HapMap-CEU	NA07022	CEPH1340.11	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
174	ss44144118	N/N	CSHL-HAPMAP	HapMap-CEU	NA07048	CEPH1341.01	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
175	ss44144118	A/A	CSHL-HAPMAP	HapMap-CEU	NA06991	CEPH1341.02	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
184	ss44144118	N/N	CSHL-HAPMAP	HapMap-CEU	NA07034	CEPH1341.11	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
186	ss44144118	A/A	CSHL-HAPMAP	HapMap-CEU	NA06993	CEPH1341.13	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
187	ss44144118	A/A	CSHL-HAPMAP	HapMap-CEU	NA06985	CEPH1341.14	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
188	ss24203977	A/A	PERLEGEN	AFD_EUR_PANEL	NA10851		71_IND_CHR_18
188	ss44144118	N/N	CSHL-HAPMAP	HapMap-CEU	NA10851	CEPH1344.01	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
199	ss44144118	A/A	CSHL-HAPMAP	HapMap-CEU	NA12056	CEPH1344.12	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
200	ss44144118	A/A	CSHL-HAPMAP	HapMap-CEU	NA12057	CEPH1344.13	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
203	ss24203977	A/A	PERLEGEN	AFD_EUR_PANEL	NA07348		71_IND_CHR_18
203	ss44144118	A/A	CSHL-HAPMAP	HapMap-CEU	NA07348	CEPH1345.02	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
213	ss44144118	A/A	CSHL-HAPMAP	HapMap-CEU	NA07357	CEPH1345.12	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
214	ss44144118	A/A	CSHL-HAPMAP	HapMap-CEU	NA07345	CEPH1345.13	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
215	ss24203977	A/A	PERLEGEN	AFD_EUR_PANEL	NA10857		71_IND_CHR_18
215	ss44144118	N/N	CSHL-HAPMAP	HapMap-CEU	NA10857	CEPH1346.01	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
225	ss44144118	A/A	CSHL-HAPMAP	HapMap-CEU	NA12043	CEPH1346.11	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
226	ss44144118	A/A	CSHL-HAPMAP	HapMap-CEU	NA12044	CEPH1346.12	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
229	ss44144118	A/A	CSHL-HAPMAP	HapMap-CEU	NA10859	CEPH1347.02	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
238	ss44144118	A/A	CSHL-HAPMAP	HapMap-CEU	NA11881	CEPH1347.14	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
239	ss44144118	A/A	CSHL-HAPMAP	HapMap-CEU	NA11882	CEPH1347.15	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
253	ss44144118	C/C	CSHL-HAPMAP	HapMap-CEU	NA11840	CEPH1349.14	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
254	ss44144118	A/A	CSHL-HAPMAP	HapMap-CEU	NA10856	CEPH1350.01	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
255	ss44144118	A/A	CSHL-HAPMAP	HapMap-CEU	NA10855	CEPH1350.02	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
262	ss44144118	A/A	CSHL-HAPMAP	HapMap-CEU	NA11829	CEPH1350.10	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
263	ss44144118	A/A	CSHL-HAPMAP	HapMap-CEU	NA11830	CEPH1350.11	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
264	ss44144118	A/A	CSHL-HAPMAP	HapMap-CEU	NA11831	CEPH1350.12	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
345	ss44144118	N/N	CSHL-HAPMAP	HapMap-CEU	NA12717	CEPH1358.12	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
360	ss44144118	A/A	CSHL-HAPMAP	HapMap-CEU	NA11992	CEPH1362.13	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
362	ss44144118	A/A	CSHL-HAPMAP	HapMap-CEU	NA11994	CEPH1362.15	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
363	ss44144118	C/C	CSHL-HAPMAP	HapMap-CEU	NA11995	CEPH1362.16	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
366	ss44144118	A/A	CSHL-HAPMAP	HapMap-CEU	NA10863	CEPH1375.02	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
373	ss44144118	A/A	CSHL-HAPMAP	HapMap-CEU	NA12264	CEPH1375.11	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
400	ss24203977	A/A	PERLEGEN	AFD_EUR_PANEL	NA10831		71_IND_CHR_18
400	ss44144118	A/A	CSHL-HAPMAP	HapMap-CEU	NA10831	CEPH1408.02	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
410	ss44144118	A/A	CSHL-HAPMAP	HapMap-CEU	NA12155	CEPH1408.12	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
411	ss44144118	A/A	CSHL-HAPMAP	HapMap-CEU	NA12156	CEPH1408.13	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
429	ss44144118	A/A	CSHL-HAPMAP	HapMap-CEU	NA10835	CEPH1416.01	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
438	ss44144118	A/A	CSHL-HAPMAP	HapMap-CEU	NA12248	CEPH1416.11	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
439	ss44144118	A/A	CSHL-HAPMAP	HapMap-CEU	NA12249	CEPH1416.12	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
457	ss44144118	A/A	CSHL-HAPMAP	HapMap-CEU	NA10839	CEPH1420.02	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
466	ss44144118	A/A	CSHL-HAPMAP	HapMap-CEU	NA12005	CEPH1420.11	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
467	ss44144118	A/A	CSHL-HAPMAP	HapMap-CEU	NA12006	CEPH1420.12	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
524	ss44144118	A/A	CSHL-HAPMAP	HapMap-CEU	NA12740	CEPH1444.02	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
535	ss44144118	N/N	CSHL-HAPMAP	HapMap-CEU	NA12750	CEPH1444.13	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
536	ss44144118	A/A	CSHL-HAPMAP	HapMap-CEU	NA12751	CEPH1444.14	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
537	ss44144118	A/A	CSHL-HAPMAP	HapMap-CEU	NA12752	CEPH1447.01	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
538	ss44144118	A/A	CSHL-HAPMAP	HapMap-CEU	NA12753	CEPH1447.02	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
545	ss44144118	A/A	CSHL-HAPMAP	HapMap-CEU	NA12760	CEPH1447.09	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
546	ss44144118	A/A	CSHL-HAPMAP	HapMap-CEU	NA12761	CEPH1447.10	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
548	ss44144118	A/A	CSHL-HAPMAP	HapMap-CEU	NA12763	CEPH1447.12	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
565	ss44144118	A/A	CSHL-HAPMAP	HapMap-CEU	NA12801	CEPH1454.01	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
576	ss44144118	A/A	CSHL-HAPMAP	HapMap-CEU	NA12812	CEPH1454.12	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
577	ss44144118	A/A	CSHL-HAPMAP	HapMap-CEU	NA12813	CEPH1454.13	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
610	ss44144118	A/A	CSHL-HAPMAP	HapMap-CEU	NA12864	CEPH1459.01	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
611	ss44144118	A/A	CSHL-HAPMAP	HapMap-CEU	NA12865	CEPH1459.02	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
618	ss44144118	A/A	CSHL-HAPMAP	HapMap-CEU	NA12872	CEPH1459.09	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
619	ss44144118	A/A	CSHL-HAPMAP	HapMap-CEU	NA12873	CEPH1459.10	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
621	ss44144118	A/A	CSHL-HAPMAP	HapMap-CEU	NA12875	CEPH1459.12	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
623	ss44144118	C/C	CSHL-HAPMAP	HapMap-CEU	NA12878	CEPH1463.02	r27_ch18_CEU_illumina:human_1m_beadchip	5578036
5132	ss44144118	A/A	CSHL-HAPMAP	HapMap-YRI	NA18500	YOR004.01	r27_ch18_YRI_illumina:human_1m_beadchip	5578036
5133	ss44144118	N/N	CSHL-HAPMAP	HapMap-YRI	NA18502	YOR004.02	r27_ch18_YRI_illumina:human_1m_beadchip	5578036
5136	ss44144118	A/A	CSHL-HAPMAP	HapMap-YRI	NA19132	YOR101.01	r27_ch18_YRI_illumina:human_1m_beadchip	5578036
5137	ss44144118	A/A	CSHL-HAPMAP	HapMap-YRI	NA19131	YOR101.02	r27_ch18_YRI_illumina:human_1m_beadchip	5578036
5139	ss44144118	N/N	CSHL-HAPMAP	HapMap-YRI	NA19100	YOR105.01	r27_ch18_YRI_illumina:human_1m_beadchip	5578036
5141	ss44144118	A/A	CSHL-HAPMAP	HapMap-YRI	NA19098	YOR105.03	r27_ch18_YRI_illumina:human_1m_beadchip	5578036
5142	ss44144118	A/A	CSHL-HAPMAP	HapMap-YRI	NA19194	YOR112.01	r27_ch18_YRI_illumina:human_1m_beadchip	5578036
5143	ss44144118	A/A	CSHL-HAPMAP	HapMap-YRI	NA19193	YOR112.02	r27_ch18_YRI_illumina:human_1m_beadchip	5578036
5144	ss44144118	A/A	CSHL-HAPMAP	HapMap-YRI	NA19192	YOR112.03	r27_ch18_YRI_illumina:human_1m_beadchip	5578036
5146	ss44144118	A/A	CSHL-HAPMAP	HapMap-YRI	NA19238	YOR117.02	r27_ch18_YRI_illumina:human_1m_beadchip	5578036
5147	ss44144118	A/A	CSHL-HAPMAP	HapMap-YRI	NA19239	YOR117.03	r27_ch18_YRI_illumina:human_1m_beadchip	5578036
5148	ss44144118	A/A	CSHL-HAPMAP	HapMap-HCB	NA18526	CH18526	r27_ch18_CHB_illumina:human_1m_beadchip	5578036
5149	ss44144118	A/A	CSHL-HAPMAP	HapMap-HCB	NA18524	CH18524	r27_ch18_CHB_illumina:human_1m_beadchip	5578036
5150	ss44144118	C/C	CSHL-HAPMAP	HapMap-HCB	NA18529	CH18529	r27_ch18_CHB_illumina:human_1m_beadchip	5578036
5152	ss44144118	A/A	CSHL-HAPMAP	HapMap-HCB	NA18532	CH18532	r27_ch18_CHB_illumina:human_1m_beadchip	5578036
5153	ss44144118	A/A	CSHL-HAPMAP	HapMap-HCB	NA18561	CH18561	r27_ch18_CHB_illumina:human_1m_beadchip	5578036
5155	ss44144118	A/A	CSHL-HAPMAP	HapMap-HCB	NA18537	CH18537	r27_ch18_CHB_illumina:human_1m_beadchip	5578036
5156	ss44144118	A/A	CSHL-HAPMAP	HapMap-HCB	NA18603	CH18603	r27_ch18_CHB_illumina:human_1m_beadchip	5578036
5157	ss44144118	N/N	CSHL-HAPMAP	HapMap-HCB	NA18540	CH18540	r27_ch18_CHB_illumina:human_1m_beadchip	5578036
5158	ss44144118	A/A	CSHL-HAPMAP	HapMap-HCB	NA18605	CH18605	r27_ch18_CHB_illumina:human_1m_beadchip	5578036
5161	ss44144118	A/A	CSHL-HAPMAP	HapMap-HCB	NA18572	CH18572	r27_ch18_CHB_illumina:human_1m_beadchip	5578036
5162	ss44144118	N/N	CSHL-HAPMAP	HapMap-HCB	NA18547	CH18547	r27_ch18_CHB_illumina:human_1m_beadchip	5578036
5164	ss44144118	A/A	CSHL-HAPMAP	HapMap-HCB	NA18550	CH18550	r27_ch18_CHB_illumina:human_1m_beadchip	5578036
5165	ss44144118	C/C	CSHL-HAPMAP	HapMap-HCB	NA18608	CH18608	r27_ch18_CHB_illumina:human_1m_beadchip	5578036
5166	ss44144118	A/A	CSHL-HAPMAP	HapMap-HCB	NA18552	CH18552	r27_ch18_CHB_illumina:human_1m_beadchip	5578036
5169	ss44144118	A/A	CSHL-HAPMAP	HapMap-HCB	NA18564	CH18564	r27_ch18_CHB_illumina:human_1m_beadchip	5578036
5171	ss44144118	C/C	CSHL-HAPMAP	HapMap-HCB	NA18563	CH18563	r27_ch18_CHB_illumina:human_1m_beadchip	5578036
5172	ss44144118	A/A	CSHL-HAPMAP	HapMap-HCB	NA18570	CH18570	r27_ch18_CHB_illumina:human_1m_beadchip	5578036
5173	ss44144118	A/A	CSHL-HAPMAP	HapMap-HCB	NA18612	CH18612	r27_ch18_CHB_illumina:human_1m_beadchip	5578036
5174	ss44144118	A/A	CSHL-HAPMAP	HapMap-HCB	NA18571	CH18571	r27_ch18_CHB_illumina:human_1m_beadchip	5578036
5175	ss44144118	A/A	CSHL-HAPMAP	HapMap-HCB	NA18620	CH18620	r27_ch18_CHB_illumina:human_1m_beadchip	5578036
5176	ss44144118	A/A	CSHL-HAPMAP	HapMap-HCB	NA18621	CH18621	r27_ch18_CHB_illumina:human_1m_beadchip	5578036
5177	ss44144118	A/A	CSHL-HAPMAP	HapMap-HCB	NA18594	CH18594	r27_ch18_CHB_illumina:human_1m_beadchip	5578036
5179	ss44144118	C/C	CSHL-HAPMAP	HapMap-HCB	NA18573	CH18573	r27_ch18_CHB_illumina:human_1m_beadchip	5578036
5184	ss44144118	A/A	CSHL-HAPMAP	HapMap-HCB	NA18579	CH18579	r27_ch18_CHB_illumina:human_1m_beadchip	5578036
5186	ss44144118	A/A	CSHL-HAPMAP	HapMap-HCB	NA18582	CH18582	r27_ch18_CHB_illumina:human_1m_beadchip	5578036
5187	ss44144118	A/A	CSHL-HAPMAP	HapMap-HCB	NA18633	CH18633	r27_ch18_CHB_illumina:human_1m_beadchip	5578036
5188	ss44144118	A/A	CSHL-HAPMAP	HapMap-HCB	NA18635	CH18635	r27_ch18_CHB_illumina:human_1m_beadchip	5578036
5189	ss44144118	A/A	CSHL-HAPMAP	HapMap-HCB	NA18592	CH18592	r27_ch18_CHB_illumina:human_1m_beadchip	5578036
5193	ss44144118	A/A	CSHL-HAPMAP	HapMap-JPT	NA18942	JA18942	r27_ch18_JPT_illumina:human_1m_beadchip	5578036
5194	ss44144118	A/A	CSHL-HAPMAP	HapMap-JPT	NA18940	JA18940	r27_ch18_JPT_illumina:human_1m_beadchip	5578036
5198	ss44144118	A/A	CSHL-HAPMAP	HapMap-JPT	NA18944	JA18944	r27_ch18_JPT_illumina:human_1m_beadchip	5578036
5200	ss44144118	C/C	CSHL-HAPMAP	HapMap-JPT	NA18949	JA18949	r27_ch18_JPT_illumina:human_1m_beadchip	5578036
5201	ss44144118	A/A	CSHL-HAPMAP	HapMap-JPT	NA18948	JA18948	r27_ch18_JPT_illumina:human_1m_beadchip	5578036
5204	ss44144118	C/C	CSHL-HAPMAP	HapMap-JPT	NA18964	JA18964	r27_ch18_JPT_illumina:human_1m_beadchip	5578036
5205	ss44144118	A/A	CSHL-HAPMAP	HapMap-JPT	NA18953	JA18953	r27_ch18_JPT_illumina:human_1m_beadchip	5578036
5207	ss44144118	A/A	CSHL-HAPMAP	HapMap-JPT	NA18959	JA18959	r27_ch18_JPT_illumina:human_1m_beadchip	5578036
5211	ss44144118	A/A	CSHL-HAPMAP	HapMap-JPT	NA18972	JA18972	r27_ch18_JPT_illumina:human_1m_beadchip	5578036
5212	ss44144118	A/A	CSHL-HAPMAP	HapMap-JPT	NA18965	JA18965	r27_ch18_JPT_illumina:human_1m_beadchip	5578036
5213	ss44144118	A/A	CSHL-HAPMAP	HapMap-JPT	NA18973	JA18973	r27_ch18_JPT_illumina:human_1m_beadchip	5578036
5214	ss44144118	A/A	CSHL-HAPMAP	HapMap-JPT	NA18966	JA18966	r27_ch18_JPT_illumina:human_1m_beadchip	5578036
5215	ss44144118	A/A	CSHL-HAPMAP	HapMap-JPT	NA18975	JA18975	r27_ch18_JPT_illumina:human_1m_beadchip	5578036
5216	ss44144118	A/A	CSHL-HAPMAP	HapMap-JPT	NA18967	JA18967	r27_ch18_JPT_illumina:human_1m_beadchip	5578036
5217	ss44144118	A/A	CSHL-HAPMAP	HapMap-JPT	NA18976	JA18976	r27_ch18_JPT_illumina:human_1m_beadchip	5578036
5218	ss44144118	A/A	CSHL-HAPMAP	HapMap-JPT	NA18978	JA18978	r27_ch18_JPT_illumina:human_1m_beadchip	5578036
5219	ss44144118	A/A	CSHL-HAPMAP	HapMap-JPT	NA18970	JA18970	r27_ch18_JPT_illumina:human_1m_beadchip	5578036
5220	ss44144118	A/A	CSHL-HAPMAP	HapMap-JPT	NA18980	JA18980	r27_ch18_JPT_illumina:human_1m_beadchip	5578036
5221	ss44144118	A/A	CSHL-HAPMAP	HapMap-JPT	NA18995	JA18995	r27_ch18_JPT_illumina:human_1m_beadchip	5578036
5224	ss44144118	A/A	CSHL-HAPMAP	HapMap-JPT	NA18974	JA18974	r27_ch18_JPT_illumina:human_1m_beadchip	5578036
5225	ss44144118	A/A	CSHL-HAPMAP	HapMap-JPT	NA18987	JA18987	r27_ch18_JPT_illumina:human_1m_beadchip	5578036
5226	ss44144118	A/A	CSHL-HAPMAP	HapMap-JPT	NA18990	JA18990	r27_ch18_JPT_illumina:human_1m_beadchip	5578036
5232	ss44144118	A/A	CSHL-HAPMAP	HapMap-JPT	NA19000	JA19000	r27_ch18_JPT_illumina:human_1m_beadchip	5578036
5233	ss44144118	A/A	CSHL-HAPMAP	HapMap-JPT	NA19005	JA19005	r27_ch18_JPT_illumina:human_1m_beadchip	5578036
5234	ss44144118	A/A	CSHL-HAPMAP	HapMap-JPT	NA18999	JA18999	r27_ch18_JPT_illumina:human_1m_beadchip	5578036
5235	ss44144118	A/A	CSHL-HAPMAP	HapMap-JPT	NA19007	JA19007	r27_ch18_JPT_illumina:human_1m_beadchip	5578036
5236	ss44144118	N/N	CSHL-HAPMAP	HapMap-JPT	NA19003	JA19003	r27_ch18_JPT_illumina:human_1m_beadchip	5578036
5238	ss44144118	A/A	CSHL-HAPMAP	HapMap-YRI	NA18503	YOR005.01	r27_ch18_YRI_illumina:human_1m_beadchip	5578036
5239	ss44144118	A/A	CSHL-HAPMAP	HapMap-YRI	NA18505	YOR005.02	r27_ch18_YRI_illumina:human_1m_beadchip	5578036
5240	ss44144118	A/A	CSHL-HAPMAP	HapMap-YRI	NA18504	YOR005.03	r27_ch18_YRI_illumina:human_1m_beadchip	5578036
5245	ss44144118	C/C	CSHL-HAPMAP	HapMap-YRI	NA18858	YOR012.02	r27_ch18_YRI_illumina:human_1m_beadchip	5578036
5248	ss44144118	C/C	CSHL-HAPMAP	HapMap-YRI	NA18517	YOR013.02	r27_ch18_YRI_illumina:human_1m_beadchip	5578036
5249	ss44144118	A/A	CSHL-HAPMAP	HapMap-YRI	NA18516	YOR013.03	r27_ch18_YRI_illumina:human_1m_beadchip	5578036
5250	ss44144118	N/N	CSHL-HAPMAP	HapMap-YRI	NA18521	YOR016.01	r27_ch18_YRI_illumina:human_1m_beadchip	5578036
5254	ss44144118	A/A	CSHL-HAPMAP	HapMap-YRI	NA18870	YOR017.02	r27_ch18_YRI_illumina:human_1m_beadchip	5578036
5256	ss44144118	A/A	CSHL-HAPMAP	HapMap-YRI	NA18854	YOR018.01	r27_ch18_YRI_illumina:human_1m_beadchip	5578036
5257	ss44144118	A/A	CSHL-HAPMAP	HapMap-YRI	NA18852	YOR018.02	r27_ch18_YRI_illumina:human_1m_beadchip	5578036
5259	ss44144118	A/A	CSHL-HAPMAP	HapMap-YRI	NA18857	YOR023.01	r27_ch18_YRI_illumina:human_1m_beadchip	5578036
5260	ss44144118	A/A	CSHL-HAPMAP	HapMap-YRI	NA18855	YOR023.02	r27_ch18_YRI_illumina:human_1m_beadchip	5578036
5262	ss44144118	A/A	CSHL-HAPMAP	HapMap-YRI	NA18863	YOR024.01	r27_ch18_YRI_illumina:human_1m_beadchip	5578036
5263	ss44144118	A/A	CSHL-HAPMAP	HapMap-YRI	NA18861	YOR024.02	r27_ch18_YRI_illumina:human_1m_beadchip	5578036
5264	ss44144118	A/A	CSHL-HAPMAP	HapMap-YRI	NA18862	YOR024.03	r27_ch18_YRI_illumina:human_1m_beadchip	5578036
5265	ss44144118	A/A	CSHL-HAPMAP	HapMap-YRI	NA18914	YOR028.01	r27_ch18_YRI_illumina:human_1m_beadchip	5578036
5266	ss44144118	A/A	CSHL-HAPMAP	HapMap-YRI	NA18912	YOR028.02	r27_ch18_YRI_illumina:human_1m_beadchip	5578036
5267	ss44144118	A/A	CSHL-HAPMAP	HapMap-YRI	NA18913	YOR028.03	r27_ch18_YRI_illumina:human_1m_beadchip	5578036
5268	ss44144118	A/A	CSHL-HAPMAP	HapMap-YRI	NA19094	YOR040.01	r27_ch18_YRI_illumina:human_1m_beadchip	5578036
5270	ss44144118	N/N	CSHL-HAPMAP	HapMap-YRI	NA19092	YOR040.03	r27_ch18_YRI_illumina:human_1m_beadchip	5578036
5271	ss44144118	A/A	CSHL-HAPMAP	HapMap-YRI	NA19103	YOR042.01	r27_ch18_YRI_illumina:human_1m_beadchip	5578036
5272	ss44144118	A/A	CSHL-HAPMAP	HapMap-YRI	NA19102	YOR042.02	r27_ch18_YRI_illumina:human_1m_beadchip	5578036
5273	ss44144118	A/A	CSHL-HAPMAP	HapMap-YRI	NA19101	YOR042.03	r27_ch18_YRI_illumina:human_1m_beadchip	5578036
5274	ss44144118	A/A	CSHL-HAPMAP	HapMap-YRI	NA19139	YOR043.01	r27_ch18_YRI_illumina:human_1m_beadchip	5578036
5275	ss44144118	A/A	CSHL-HAPMAP	HapMap-YRI	NA19137	YOR043.02	r27_ch18_YRI_illumina:human_1m_beadchip	5578036
5276	ss44144118	A/A	CSHL-HAPMAP	HapMap-YRI	NA19138	YOR043.03	r27_ch18_YRI_illumina:human_1m_beadchip	5578036
5278	ss44144118	C/C	CSHL-HAPMAP	HapMap-YRI	NA19201	YOR045.02	r27_ch18_YRI_illumina:human_1m_beadchip	5578036
5279	ss44144118	A/A	CSHL-HAPMAP	HapMap-YRI	NA19200	YOR045.03	r27_ch18_YRI_illumina:human_1m_beadchip	5578036
5282	ss44144118	A/A	CSHL-HAPMAP	HapMap-YRI	NA19171	YOR047.03	r27_ch18_YRI_illumina:human_1m_beadchip	5578036
5286	ss44144118	A/A	CSHL-HAPMAP	HapMap-YRI	NA19211	YOR050.01	r27_ch18_YRI_illumina:human_1m_beadchip	5578036
5287	ss44144118	A/A	CSHL-HAPMAP	HapMap-YRI	NA19209	YOR050.02	r27_ch18_YRI_illumina:human_1m_beadchip	5578036
5288	ss44144118	A/A	CSHL-HAPMAP	HapMap-YRI	NA19210	YOR050.03	r27_ch18_YRI_illumina:human_1m_beadchip	5578036
5289	ss44144118	A/A	CSHL-HAPMAP	HapMap-YRI	NA19208	YOR051.01	r27_ch18_YRI_illumina:human_1m_beadchip	5578036
5290	ss44144118	A/A	CSHL-HAPMAP	HapMap-YRI	NA19206	YOR051.02	r27_ch18_YRI_illumina:human_1m_beadchip	5578036
5291	ss44144118	A/A	CSHL-HAPMAP	HapMap-YRI	NA19207	YOR051.03	r27_ch18_YRI_illumina:human_1m_beadchip	5578036
5292	ss44144118	A/A	CSHL-HAPMAP	HapMap-YRI	NA19161	YOR056.01	r27_ch18_YRI_illumina:human_1m_beadchip	5578036
5293	ss44144118	A/A	CSHL-HAPMAP	HapMap-YRI	NA19159	YOR056.02	r27_ch18_YRI_illumina:human_1m_beadchip	5578036
5295	ss44144118	A/A	CSHL-HAPMAP	HapMap-YRI	NA19221	YOR058.01	r27_ch18_YRI_illumina:human_1m_beadchip	5578036
5296	ss44144118	A/A	CSHL-HAPMAP	HapMap-YRI	NA19222	YOR058.02	r27_ch18_YRI_illumina:human_1m_beadchip	5578036
5297	ss44144118	A/A	CSHL-HAPMAP	HapMap-YRI	NA19223	YOR058.03	r27_ch18_YRI_illumina:human_1m_beadchip	5578036
5300	ss44144118	A/A	CSHL-HAPMAP	HapMap-YRI	NA19119	YOR060.03	r27_ch18_YRI_illumina:human_1m_beadchip	5578036
5301	ss44144118	A/A	CSHL-HAPMAP	HapMap-YRI	NA19142	YOR071.01	r27_ch18_YRI_illumina:human_1m_beadchip	5578036
5303	ss44144118	A/A	CSHL-HAPMAP	HapMap-YRI	NA19141	YOR071.03	r27_ch18_YRI_illumina:human_1m_beadchip	5578036
5307	ss44144118	N/N	CSHL-HAPMAP	HapMap-YRI	NA19145	YOR074.01	r27_ch18_YRI_illumina:human_1m_beadchip	5578036
5309	ss44144118	A/A	CSHL-HAPMAP	HapMap-YRI	NA19144	YOR074.03	r27_ch18_YRI_illumina:human_1m_beadchip	5578036
5310	ss44144118	A/A	CSHL-HAPMAP	HapMap-YRI	NA19129	YOR077.01	r27_ch18_YRI_illumina:human_1m_beadchip	5578036
6331	ss44144118	N/N	CSHL-HAPMAP	HapMap-JPT	NA19012	JA19012	r27_ch18_JPT_illumina:human_1m_beadchip	5578036

Genotype data submitted for	1318	samples from	1303	individuals	Individual with multiple genotypes submission:	15

Validation Summary:

Validation status

Marker displays
Mendelian segregation

PCR results confirmed
in multiple reactions

Homozygotes detected
in individual genotype data

DoubleHit found by: BCM_SSAHASNP

UNKNOWN

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Revised: May 25, 2006 1:38 PM .