| RefSNP | | Organism: | human (Homo sapiens) | | Molecule Type: | Genomic | | Created/Updated in build: | 126/130 | | Map to Genome Build: | 36.3 |
| | Allele | | Variation Class: | DIP:
deletion/insertion polymorphism | | RefSNP Alleles: | -/A | | Ancestral Allele: | Not available | | Clinical Association: | unknown |
| | HGVS Names | | NM_000550.2:c.1584_1585insA |
| |
SNP Details are organized in the following sections:
The submission ss43431270 has the longest flanking sequence of all cluster members and was used to instantiate sequence for rs34883117 during BLAST analysis for the current build.
NCBI
Assay ID | Handle|Submitter ID | Validation
Status | ss to rs
Orientation
/Strand | Alleles | 5' Near Seq 30 bp | 3' Near Seq 30 bp | Entry
Date | Update
Date | Build
Added | Molecule
Type | Freq
Warning | Ancestral
Allele | Success
Rate |
|---|
| ss43431270 | ABI|hCV33355943 |  | fwd/ | -/A | tatcaatgctatgctgaagaatatgaaaaa | ctccagaatcctaatcagtctgtggtctaa | 07/18/05 | 07/18/05 | 126 | Genomic | | | unknown |
>gnl|dbSNP|rs34883117|allelePos=301|totalLen=601|taxid=9606|snpclass=2|alleles='-/A'|mol=Genomic|build=126 GCCAATGTAA ATTAAATATG AGGATTTCTG TTAAAATAGA CATTTCTAAA TTTCATGTGT
CCACTTTTTG GTGATAACTA TTTTAATATT TGTCTTTTTA TTTTTAATCT TCCTTTCCAA
ATAGGTCGGG AGTTTAGTGT ACCTGAGATA ATTGCCATAG CAGTAGTTGG CGCTTTGTTA
CTGGTTGCAC TCATTTTTGG GACTGCTTCT TATCTGATTC GTGCCAGACG CAGTATGGAT
GAAGCTAACC AGCCTCTCCT CACTGATCAG TATCAATGCT ATGCTGAAGA ATATGAAAAA
N
CTCCAGAATC CTAATCAGTC TGTGGTCTAA CAAATGCCCT ACTCTCTTAT GCATTAGTAT
CACAAAACCA CCTGGTTGAA TATAATAGAT TGAGTTATTA ACTGTATTTT CTTTCACTTT
ATTACCTTCT TTCTAATACA AGCATATGTT AGAATTAAAG TTCTAGGCAT ACTTTTCAAA
GCTGGGAAGA CCCTTTCAGA ATCTTTTCAA TGGGTTTTAA TTTTCAGTTC TATTTAAAAT
GGTGAATGAC ACTAAACTCC ATGATATTTA AGGATAGTGT GAAGATCTTT GGCATGATTT
GeneView via analysis of contig annotation:
View more variation on this gene (click to hide).
| Assembly |
SNP to Chr |
Chr |
Chr position |
Contig |
Contig position |
Allele |
| Function |
mRNA |
Protein |
| mRNA to Chr |
Accession |
Position |
Allele change |
Accession |
Position |
Residue change |
on assembly: is labeled at position on chromosome .
GeneView via analysis of contig annotation: N/A.
GeneView via direct blast against RefSeq sequences (used when no gene model is available):
| Function |
Chr |
mRNA |
Protein |
| SNP to mRNA |
Accession |
Position |
Allele change |
Accession |
Position |
Residue change |
on assembly: is labeled at position on chromosome .
GeneView via direct blast against RefSeq sequences (used when no gene model is available): N/A
doesn't map to any assembly.
There is no frequency data.
| Validation status | Marker displays
Mendelian segregation | PCR results confirmed
in multiple reactions | Homozygotes detected
in individual genotype data | | UNKNOWN | UNKNOWN | UNKNOWN |
| 
