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BUILD 130
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SNP linked to Gene NR0B2(geneID:8431) Via Contig Annotation
rs# on all gene models to Batch Query
all rs# to file.

  Gene Model (mRNA alignment) information from genome sequence back to top
Total gene model (contig mRNA transcript): 1
mrna transcript protein mrna orientation Contig Contig Label List SNP
NM_021969.2 minus strand NP_068804.1 reverse NT_004610.18 reference <- currently shown

Include clinically associated in gene region cSNP has frequency double hit

gene model
(contig mRNA transcript):
Contig Label Contig mrna protein mrna orientation transcript snp count
reference NT_004610.18 NM_021969.2 NP_068804.1 reverse minus strand 2, coding

Color Legend

Region Contig
position
mRNA
pos
dbSNP rs#
cluster id
Hetero-
zygosity
Validation 3D Clinically
Associated
Function dbSNP
allele
Protein
residue
Codon
pos
Amino acid
pos
PubMed
exon_1 10064262 648 rs6659176 0.095 byClusterbyFreqwithHapMapFreq missense C Ala [A] 2 171
contig reference G Gly [G] 2 171
10064594 315 rs34082206 N.D. frame shift G Cys [C] 2 60
contig reference -/C Leu [L] 2 60
exon_1 10064773 30 start codon 1

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Revised: May 25, 2006 1:38 PM .