NCBI GenBank

Mouse To Human Homology Region Map, Chromosome X

How to use this Resource

Cross Mouse Locus Mouse Gene Human Chr. Human Gene In Situ Method RH Map Genethon Map Homology Group
0.5 DXHXF34 X DXF34S1 Xp11.21 198
1.4 Syp X SYP Xp11.23-p11.22 R,P,G X06389 68-77 198
0.8 Clc5 X CLCN5 Xp11.1 198
1.6 Tcfe3 X TFE3 Xp11.22 R,P,G SGC32925 68-82 198
1.8 Gata1 X GATA1 Xp11.23 P 198
2.6 Xkh X* XK Xp21.1-Xp11.4 R Cda0hh12 46-68 197
2.8 Cybb X* CYBB Xp21.1 P 197
3.0 Otc X* OTC Xp21.1 R,P,G WI-9177 47-56 197
3.5 DXHXS32 X* DXS32 Xp22-p11 197
3.5 DXHXS676 X* DXS676 Xp21.1-p11.3 197
5.2 Maob X* MAOB Xp11.4-p11.3 P,G 197
5.2 Maoa X* MAOA Xp11.4-p11.3 R,P SHGC-11177 68-77 197
5.3 Ndph X* NDPH Xp11.4-p11,2 R SHGC-12355 68-77 197
b 5.4 Ube1x X* UBE1 Xp11.23 P 197
b 6.2 Araf X* ARAF1 Xp11.3-p11.23 R,P SGC30176 68-82 197
6(g) Syn1 X* SYN1 Xp11.23 P 197
6.2 Timp X* TIMP1 Xp11.3-p11.23 P,G 197
6.2 Pfc X* PFC Xp11.3-p11.23 P,G 197
a 6.2 Elk1 X* ELK1 Xp11.3-p11.23 P 197
12.0 Agtr2 X AGTR2 Xq22-q23 201
12.0 Lamp2 X LAMP2 Xq24 P WI-9475 121-139 201
14.0 Ant2 X ANT2 Xq24-q25 201
S Htr1c X HTR1C Xq24 201
b 17.0 Hprt X HPRT Xq26.1 P 201
21.0 DXHXS144E X DXS144E Xq26.2 P 201
b 18(g) Cd40l X CD40L Xq26 R,P L07414 150-153 201
22.0 Cf9 X F9 Xq26.3-q27.1 R,P,G M11309 155 201
22.5 Mcf2 X MCF2 Xq26.3-q27.1 P 201
23.5 Cdr X CDR1 Xq27.1-q27.2 P 201
24.5 Fmr1 X FMR1 Xq27.3 P 201
24.5 DXHXS296 X DXS296 Xq27.3-q28 P 201
27.0 Ids X IDS Xq27.3-q28 R,P,G SHGC-11149 187 201
28.5 Gabra3 X GABRA3 Xq28 P 201
28.9 Calt X CALT Xq28 201
28.0 DXHXS1104 X DXS1104 Xq28 P 201
29.0 Bpa X CDPX2 X 201
29.0 DXHXS52 X DXS52 Xq28 P 201
29.1 F8a X F8A Xq28 R WI-12360 187-190 201
29.3 Bgn X BGN Xq28 P 201
29.5 Creat X CREAT Xq28 201
29.5 Aldgh X ALD Xq28 201
29.5 Licam X LICAM Xq28 P 201
29.5 Avpr2 X AVPR2 Xq28 P 201
29.5 Renbp X RENBP Xq28 R D10232 >190 201
29.5 Hcfc1 X HCFC1 Xq28 201
29.6 Mecp2 X MECP2 X 201
29.7 Rsvp X RCP Xq28 P 201
c 29.8 Fln1 X FLN1 Xq28 P 201
29.8 Emd X EMD Xq28 201
29.8 Gdi1 X GD1 Xq28 201
30.0 DXHXS254E X DXS254E Xq28 P 201
30.0 DXHXS253E X DXS253E Xq28 P 201
a 30.0 G6pd X G6PD Xq28 P 201
30.5 Cf8 X F8C Xq28 P,G 201
32.0 DXHXS120 X DXS120 Xq27-qter 201
32.0 Dmd X* DMD Xp21.3-p21.2 R,G WI-9121 41-46 196
32.5 Gyk X* GYK Xp21.2 196
32.8 Ahc X* AHC Xp21.3 196
34.7 Phk X* PHK Xp22 196
34.6 Zfx X* ZFX Xp22.1 P 196
34.0 Pola1 X* POLA Xp22.1-p21.3 P 196
S Msn X MSN Xq11.2q12 P 199
b 36.2 Ar X* AR Xq11.2-q12 R,P,G WI-9096 84-90 200
37.0 Ta X* EDA Xq12-q13.1 P 200
37.5 Il2rg X* IL2RG Xq13.1 R,P D11086 87-97 200
b 37.5 Gjb1 X* GJB1 Xq13.1 P 200
38.0 Ccg1 X* CCG1 Xq13.1 P,G 200
38.5 Rps4x X* RPS4X Xq13.1 P 200
39.0 Phka1 X* PHKA1 Xq13.1 P 200
41.0 DXHXS393 X* DXS393 Xq13-q24 200
42.3 Xce X* XIC Xq13.2 P 200
42.0 Xist X* XIST Xq13.2 R,P A006G16 94-97 200
44.3 Xnp X* DXS6677E Xq13.3 200
44.4 Atp7a X* ATP7A Xq13.2-q13.3 P 200
b 44.8 Pgk1 X* PGK1 Xq13.3 R,P,G D29018 94-97 200
b 51.5 Btk X* BTK Xq21.33-q22 P 200
53.0 Ags X* GLA Xq21.3-q22 R,P X05790 112-121 200
57(g) DXHXS178 X* DXS178 Xq21.33-q22 P 200
55.0 DXHXS101 X* DXS101 Xq22 P 200
b 56.0 Plp X* PLP Xq21.33-q22 P 200
60.0 Prps1 X* PRPS1 Xq21-q27 200
62.0 Col4a5 X* COL4A5 Xq22 R WI-7137 121-139 200
63.5 Fgd1 X FGDY Xp11.21 199
64.0 Smcx X DXS1272E Xp11.22-p11.21 199
65.0 DXHXS679 X DXS679 Xp11.22-p11.21 P 199
65.0 DXHXS674 X DXS674 Xp11.22-p11.21 P 199
63(g) Alas2 X ALAS2 Xp11.21 P 199
64.5 Oa1 X* OA1 Xp22.3 R SGC31598 17-21 195
64.5 Apxl X* APXL Xp22.3 195
65.0 Hyp X* HYP Xp22.2-p22.1 195
66.0 Pdha1 X* PDHA1 Xp22.1 P,G 195
70(g) Grpr X* GRPR Xp11.22-cen P 195
a 67.0 Piga X* PIGA Xp22.1 P 195
68.0 Xcat X* NHS Xp22.3-p21.1 195
a 71.5 Glra2 X* GLRA2 Xp22.1-p21.3 P 195
71.5 Phka2 X* PHKA2 Xp22.2-p22.1 P 195
72.0 Prps2 X* PRPS2 Xp22.3-p22.2 P 195
a, c 72.5 Amel X* AMELX Xp22.31-p22.1 P 195
73.5 Clc4-1 X* CLCN4 Xp22.31 195
c 73.5 Sts X* STS Xp22.32 R,P WI-14685 13-17 195

Human/Mouse Homology Mapping Methods

MethodDescription
CHigh-resolution cytogenetic methods
GGenetic linkage mapping
G*Genetic mapping, with disagreements between genetic and physical map resolved in favor of physical map
LLong-range restriction site mapping
PMultiple physical methods, including YAC and cosmid contigs
RRadiation hybrid mapping
XMultiple sources of high-resolution data

Gene Notes:

KeyDescription
aGene Bank Accession Number for Mouse EST
bGene order has been changed from that shown in the chromosome committee reports or online databases, as required by high-resolution human physical mapping data; these data also indicate a probable difference between human and mouse organization, e.g. a small inversion in one species
gMouse gene order has been changed slightly to conform with human gene order in the absence of conflicting high resolution data
yPosition has been changed from that reported in chromosome committee report or or Mouse Genome Database based on additional data or review of previous data
pDifferent sources of high resolution mapping data give conflicting positions
rDifference between position in inbred mice vs. Mus spretus
uThis is a UniGene designation, given since no gene symbol has been assigned. Note: some of these designations may be retired.

Mouse Locus Notes

The notation S in the Mouse Locus column indicates a gene that is syntenic, but for which there is not enough data to assign a precise position.

Cross Information

The cross column indicates which laboratory mapped a given cross.

a - Duke/Davis cross

b - Frederick cross

c - Jackson Lab cross

RH Notes

This field contains the marker identification used in Radiation Hybrid Mapping. These hyperlinks will connect the user to the Gene Map of the Human Genome. Subsequent hyperlinks on the marker will provide marker details and hyperlink to the actual Human Gene Map region (by selecting the interval defined by the Genethon Map loci intervals). Therefore the user can rapidly obtain information on ESTs that have

Color Key for Homology Map
Human Chr. Human Chr. Human Chr. Human Chr. Human Chr. Human Chr.
1 2 3 4 5 6
7 8 9 10 11 12
13 14 15 16 17 18
19 X

The asterisk character ('*') is used to indicate a different region of homology on the same human chromosome.

A question mark ('?') indicates that the authors are uncertain that this region is truly homologous.