Mouse To Human Homology Region Map, Chromosome 9

Mouse To Human Homology Region Map, Chromosome 9

Cross Mouse Locus Mouse Gene Human Chr. Human Gene In Situ Method RH Map Genethon Map Homology Group

b 1.0 Il1bc 11 IL1BC 11q23 116

b 1.0 Mmel 11 MMEL 11q22-q23 116

3.0 Fut4 11 FUT4 11q21 116

S Pgr 11 PGR 11q22.1-q22.3 R,G PGR 103 116

S Pde4a 19 PDE4A 19 X 166

a, b 5.0 Ldlr 19 LDLR 19p13.2 R,X.G SHGC-15376 24-35 166

b 5.0 Epor 19 EPOR 19p13.2 R,X WI-14932 31-35 166

b 5.0 Dnmt 19 DNMT 19p13.2-p13.3 X 166

6.0 Acp5 19 ACP5 19p13.2-13.3 X 166

a 7.0 Icam1 19 ICAM1 19p13.2 X,G 166

a 8.0 Gria4 11* GRIA4 11q22 119

a 13.0 Girk4 11* GIRK4 11q23-qter 119

b 15.0 Ets1 11* ETS1 11q23.3 G 119

16.0 Fli1 11* FLI1 11q24.1-q24.3 R SHGC-13607 136-143 119

22.0 Es17 11* ESA4 11q 119

b 26(g) Cbl 11* CBL2 11q23.3-qter R WI-8978 >152 119

23.0 Grik4 11 GRIK4 11q23 R SHGC-31826 102-106 117

26.0 Hist5-2ax 11* H2AX 11q23.2-q23.3 R A004Z11 118-120 118

26.0 Hmbs 11* HMBS 11q23.3 G 118

a, b 26.0 Thy1 11* THY1 11q22.3-q23 R,G stSG1489 118-120 118

26.0 Cd3d 11* CD3D 11q23.3 G 118

b 26.0 Cd3g 11* CD3G 11q23 R,G SHGC-12712 118-120 118

a 26.0 Cd3e 11* CD3E 11q23 R,G WI-9069 118-120 118

26.0 All1 11* ALL1 11q23 R MLL1 118-120 118

26.0 Il10r 11* IL10R 11 R WI-7357 117-118 118

b S Mll 11* MLL 11q23 118

a 27.0 Apoa1 11* APOA1 11q23.3 R,G stSG86 112-117 118

27.0 Apoc3 11* APOC3 11q23-qter R WI-8564 110-117 118

27.0 Apoa4 11* APOA4 11q23-qter G 118

a 28.0 Ncam 11* NCAM 11q23.1 R,G WI-9123 110-112 118

a, b 28.0 Drd2 11* DRD2 11q23.1 R,G SGC31507 110-112 118

29.0 Crya2 11* CRYA2 11q22.3-q23.1 R S45630 108-110 118

30.0 Atm 11* ATM 11q22-q23 118

a 29(g) Hexa 15 HEXA 15q23-q24 R SGC33452 71 136

a 30.0 Sin3a 15 SIN3A 15 136

31.0 Cyp19 15 CYP19 15q21 R,G SHGC-10061 32-47 136

31.0 Cyp1a1 15 CYP1A1 15q22-q24 G 136

b 31.0 Cyp1a2 15 CYP1A2 15 R SGC35304 71-72 136

b 31.0 Crabp1 15 CRABP1 15q22-qter 136

31.0 Cyp11a 15 CYP11A 15q23-q24 G 136

32.0 Acra5 15 CHRNA5 15q24 G 136

32.0 Acra5 15 ACRA4 15q24 136

32.0 Mpi1 15 MPI 15q22-qter R stSG3911 70-72 136

b 32.0 Csk 15 CSK 15q23-q25 136

32.0 Pml 15 PML 15q R SGC31521 71-72 136

36.0 Pk3 15 PKM2 15q24-q25 136

39.0 Hpl 15 LIPC 15q21-q23 G 136

40.0 Tpm1 15 TPM1 15q22 136

40.0 Tcf12 15 TCF12 15q21 136

b 42.0 Myo5a 15 MYH12 15 136

40(g) Htr1b 6 HTR1B 6q13 R SHGC-11206 91-96 64

b 42.0 Bmp5 6 BMP5 6 64

a, b 43.0 Col12a1 6 COL12A1 6 64

44.0 Gst2-2 6 GST2(?) 6 R WI-9141 73-77 64

48.0 Pgm3 6 PGM3 6q12 64

48.0 Mod1 6 ME1 6q12 64

50.0 Grf1 15* GRF1 15q24 137

S Acrb4 15* CHRNB4 15q24 137

51.0 Acra3 15* CHRNA3 15q24 137

50(g) Rbp1 3 RBP1 3q21-q22 R SHGC9745 154-156 32

a, b 56.0 Trf(g) 3 TF 3q21 P,G 32

55(g) Cp 3 CP 3q23-q25 G,P 32

57.0 Gpx 3 GSHPX1 3 32

57.0 Rbp2 3 RBP2 3p11-qter 32

61(g) Ryk 3 RYK 3q22 R stSG1549 148-156 32

S D9H3S92 3* D3S92 3p21.1 25

S D9H3S93 3* D3S93 3p21.1 25

a 58.0 Pthr 3* PTHR 3p22-p21.1 25

b 59.0 Gnat1 3* GNAT1 3p21 25

b 59.0 Gnai2 3* GNAI2 3p21.3-p21.2 P 25

60.0 Acy1 3* ACY1 3p21.1 R stSB1354 35-36 25

b 60.0 Lamb2 3* LAMB2 3p21-q21 R WI-8710 35-36 25

60.0 Apeh 3* APEH 3p21.3-p21.2 25

b 60.0 Hgfl 3* MST1 3p21.3 G 25

60.0 Dag1 3* DAG1 3p21 25

61.0 Ltf 3* LTF 3p21 R 25

b 61.0 Col7a1 3* COL7A1 3p21 25

61.0 Mylc 3* MYL3 3p21.3-p21.2 R 25

a 62.0 Tgfbr2 3* TGFBR2 3p22 25

62.0 Mlh1 3* MLH1 3p23-p22 25

66.0 Bg1 3* GLB1 3p22-p21.3 R M34423 49-55 25

70.0 Scn5a 3* SCN5A 3p21 25

a, b 71.0 Cck 3* CCK 3p22-p21.3 R stSG4228 63-67 25

b 71.0 Nktr 3* NKTR 3p23-p21 R L17326 63-67 25

71.0 Tna 3* TNA 3 R SGC32929 63-67 25

72.0 Cmkbr1 3* CMKBR1 3p21 25

72.0 Catnb 3* CATNB 3p21 25

Cross	Mouse Locus	Mouse Gene	Human Chr.	Human Gene	In Situ	Method	RH Map	Genethon Map	Homology Group
b	1.0	Il1bc	11	IL1BC	11q23				116
b	1.0	Mmel	11	MMEL	11q22-q23				116
	3.0	Fut4	11	FUT4	11q21				116
	S	Pgr	11	PGR	11q22.1-q22.3	R,G	PGR	103	116
	S	Pde4a	19	PDE4A	19	X			166
a, b	5.0	Ldlr	19	LDLR	19p13.2	R,X.G	SHGC-15376	24-35	166
b	5.0	Epor	19	EPOR	19p13.2	R,X	WI-14932	31-35	166
b	5.0	Dnmt	19	DNMT	19p13.2-p13.3	X			166
	6.0	Acp5	19	ACP5	19p13.2-13.3	X			166
a	7.0	Icam1	19	ICAM1	19p13.2	X,G			166
a	8.0	Gria4	11*	GRIA4	11q22				119
a	13.0	Girk4	11*	GIRK4	11q23-qter				119
b	15.0	Ets1	11*	ETS1	11q23.3	G			119
	16.0	Fli1	11*	FLI1	11q24.1-q24.3	R	SHGC-13607	136-143	119
	22.0	Es17	11*	ESA4	11q				119
b	26(g)	Cbl	11*	CBL2	11q23.3-qter	R	WI-8978	>152	119
	23.0	Grik4	11	GRIK4	11q23	R	SHGC-31826	102-106	117
	26.0	Hist5-2ax	11*	H2AX	11q23.2-q23.3	R	A004Z11	118-120	118
	26.0	Hmbs	11*	HMBS	11q23.3	G			118
a, b	26.0	Thy1	11*	THY1	11q22.3-q23	R,G	stSG1489	118-120	118
	26.0	Cd3d	11*	CD3D	11q23.3	G			118
b	26.0	Cd3g	11*	CD3G	11q23	R,G	SHGC-12712	118-120	118
a	26.0	Cd3e	11*	CD3E	11q23	R,G	WI-9069	118-120	118
	26.0	All1	11*	ALL1	11q23	R	MLL1	118-120	118
	26.0	Il10r	11*	IL10R	11	R	WI-7357	117-118	118
b	S	Mll	11*	MLL	11q23				118
a	27.0	Apoa1	11*	APOA1	11q23.3	R,G	stSG86	112-117	118
	27.0	Apoc3	11*	APOC3	11q23-qter	R	WI-8564	110-117	118
	27.0	Apoa4	11*	APOA4	11q23-qter	G			118
a	28.0	Ncam	11*	NCAM	11q23.1	R,G	WI-9123	110-112	118
a, b	28.0	Drd2	11*	DRD2	11q23.1	R,G	SGC31507	110-112	118
	29.0	Crya2	11*	CRYA2	11q22.3-q23.1	R	S45630	108-110	118
	30.0	Atm	11*	ATM	11q22-q23				118
a	29(g)	Hexa	15	HEXA	15q23-q24	R	SGC33452	71	136
a	30.0	Sin3a	15	SIN3A	15				136
	31.0	Cyp19	15	CYP19	15q21	R,G	SHGC-10061	32-47	136
	31.0	Cyp1a1	15	CYP1A1	15q22-q24	G			136
b	31.0	Cyp1a2	15	CYP1A2	15	R	SGC35304	71-72	136
b	31.0	Crabp1	15	CRABP1	15q22-qter				136
	31.0	Cyp11a	15	CYP11A	15q23-q24	G			136
	32.0	Acra5	15	CHRNA5	15q24	G			136
	32.0	Acra5	15	ACRA4	15q24				136
	32.0	Mpi1	15	MPI	15q22-qter	R	stSG3911	70-72	136
b	32.0	Csk	15	CSK	15q23-q25				136
	32.0	Pml	15	PML	15q	R	SGC31521	71-72	136
	36.0	Pk3	15	PKM2	15q24-q25				136
	39.0	Hpl	15	LIPC	15q21-q23	G			136
	40.0	Tpm1	15	TPM1	15q22				136
	40.0	Tcf12	15	TCF12	15q21				136
b	42.0	Myo5a	15	MYH12	15				136
	40(g)	Htr1b	6	HTR1B	6q13	R	SHGC-11206	91-96	64
b	42.0	Bmp5	6	BMP5	6				64
a, b	43.0	Col12a1	6	COL12A1	6				64
	44.0	Gst2-2	6	GST2(?)	6	R	WI-9141	73-77	64
	48.0	Pgm3	6	PGM3	6q12				64
	48.0	Mod1	6	ME1	6q12				64
	50.0	Grf1	15*	GRF1	15q24				137
	S	Acrb4	15*	CHRNB4	15q24				137
	51.0	Acra3	15*	CHRNA3	15q24				137
	50(g)	Rbp1	3	RBP1	3q21-q22	R	SHGC9745	154-156	32
a, b	56.0	Trf(g)	3	TF	3q21	P,G			32
	55(g)	Cp	3	CP	3q23-q25	G,P			32
	57.0	Gpx	3	GSHPX1	3				32
	57.0	Rbp2	3	RBP2	3p11-qter				32
	61(g)	Ryk	3	RYK	3q22	R	stSG1549	148-156	32
	S	D9H3S92	3*	D3S92	3p21.1				25
	S	D9H3S93	3*	D3S93	3p21.1				25
a	58.0	Pthr	3*	PTHR	3p22-p21.1				25
b	59.0	Gnat1	3*	GNAT1	3p21				25
b	59.0	Gnai2	3*	GNAI2	3p21.3-p21.2	P			25
	60.0	Acy1	3*	ACY1	3p21.1	R	stSB1354	35-36	25
b	60.0	Lamb2	3*	LAMB2	3p21-q21	R	WI-8710	35-36	25
	60.0	Apeh	3*	APEH	3p21.3-p21.2				25
b	60.0	Hgfl	3*	MST1	3p21.3	G			25
	60.0	Dag1	3*	DAG1	3p21				25
	61.0	Ltf	3*	LTF	3p21	R			25
b	61.0	Col7a1	3*	COL7A1	3p21				25
	61.0	Mylc	3*	MYL3	3p21.3-p21.2	R			25
a	62.0	Tgfbr2	3*	TGFBR2	3p22				25
	62.0	Mlh1	3*	MLH1	3p23-p22				25
	66.0	Bg1	3*	GLB1	3p22-p21.3	R	M34423	49-55	25
	70.0	Scn5a	3*	SCN5A	3p21				25
a, b	71.0	Cck	3*	CCK	3p22-p21.3	R	stSG4228	63-67	25
b	71.0	Nktr	3*	NKTR	3p23-p21	R	L17326	63-67	25
	71.0	Tna	3*	TNA	3	R	SGC32929	63-67	25
	72.0	Cmkbr1	3*	CMKBR1	3p21				25
	72.0	Catnb	3*	CATNB	3p21				25

Human/Mouse Homology Mapping Methods

Method	Description
C	High-resolution cytogenetic methods
G	Genetic linkage mapping
G*	Genetic mapping, with disagreements between genetic and physical map resolved in favor of physical map
L	Long-range restriction site mapping
P	Multiple physical methods, including YAC and cosmid contigs
R	Radiation hybrid mapping
X	Multiple sources of high-resolution data

Gene Notes:

Key	Description
a	Gene Bank Accession Number for Mouse EST
b	Gene order has been changed from that shown in the chromosome committee reports or online databases, as required by high-resolution human physical mapping data; these data also indicate a probable difference between human and mouse organization, e.g. a small inversion in one species
g	Mouse gene order has been changed slightly to conform with human gene order in the absence of conflicting high resolution data
y	Position has been changed from that reported in chromosome committee report or or Mouse Genome Database based on additional data or review of previous data
p	Different sources of high resolution mapping data give conflicting positions
r	Difference between position in inbred mice vs. Mus spretus
u	This is a UniGene designation, given since no gene symbol has been assigned. Note: some of these designations may be retired.

Mouse Locus Notes

The notation S in the Mouse Locus column indicates a gene that is syntenic, but for which there is not enough data to assign a precise position.

Cross Information

The cross column indicates which laboratory mapped a given cross.

a - Duke/Davis cross

b - Frederick cross

c - Jackson Lab cross

RH Notes

This field contains the marker identification used in Radiation Hybrid Mapping. These hyperlinks will connect the user to the Gene Map of the Human Genome. Subsequent hyperlinks on the marker will provide marker details and hyperlink to the actual Human Gene Map region (by selecting the interval defined by the Genethon Map loci intervals). Therefore the user can rapidly obtain information on ESTs that have

Color Key for Homology Map

Human Chr.	Human Chr.	Human Chr.	Human Chr.	Human Chr.	Human Chr.
1	2	3	4	5	6
7	8	9	10	11	12
13	14	15	16	17	18
19	X

The asterisk character ('*') is used to indicate a different region of homology on the same human chromosome.

A question mark ('?') indicates that the authors are uncertain that this region is truly homologous.