Mouse To Human Homology Region Map, Chromosome 5

Mouse To Human Homology Region Map, Chromosome 5

Cross Mouse Locus Mouse Gene Human Chr. Human Gene In Situ Method RH Map Genethon Map Homology Group

1.0 Gnai1 7 GNAI1 7q21-q22 77

1.0 Pgy1 7 PGY1 7q21-q22 P,C 77

1.0 Pgy3 7 PGY3 7q21-q22 P,G 77

1.0 Sri 7 SRI 7q21 77

4.0 Cchl2a 7 CCHL2A 7q21-q22 P 77

a, b 4.0 Hgf 7 HGF 7q21.1 P 77

8.0 Rln 7 RELN 7q22 P,R SHGC-32029 114-119 77

c 9.0 Nos3 7* NOS3 7q35-q36 R SHGC-11213 163 81

12.0 Cdk5 7* CDK5 7q36 R SGC30025 167-175 81

12.0 Dpp6 7* DPP6 7 81

14.0 Ae2 7* SLC4A2 7q35-q36 81

15.0 Htr5a 7* HTR5A 7q35-q36 81

b 15.0 En2 7* EN2 7q36 P,G 81

16.0 Shh 7* SHH 7q36 81

a, b 17.0 Il6 7 IL6 7p21-p15 P,R,G SHGC-9784 36-39 70

18.0 Tyms 18 TYMS 18p11.3 153

18.0 Lrpap1 4 LRPAP1 4p16.3 38

20.0 Gprk2l 4 GPRK2L 4p16.3 38

b 20.0 D5H4S43 4 D4S43 4p16.3 38

b 20.0 Fgfr3 4 FGFR3 4p16.3 R X84939 0 38

20.0 Adra2c 4 ADRA2C 4p16.3-p15 R,G SHGC-13378 6-12 38

20.0 Add1 4 ADD1 4p16.3 38

21.0 Hdh 4 HD 4p16.3 38

b 21.0 Msx1 4 MSX1 4p16.3-p16.1 G 38

22.0 D5H4S115 4 D4S115 4p16.3 38

23.0 D5H4S62 4 D4S62 4p16.2-p16.1 38

b 23.0 Drd5 4 DRD5 4p15.3-p15.1 R 38

28.0 Cd38 4 CD38 4 R SGC31590 24-32 38

a 30.0 Qdpr 4 QDPR 4p15.3 38

33.0 D5H4S76 4 D4S76 4p16.2-p15.1 38

33.0 D5H4S80 4 D4S80 4p16.2-p15.1 38

c 34.0 Cckar 4 CCKAR 4 R SHGC12838 38-43 38

38.0 Pgm1 4 PGM2 4p14-q12 38

39.0 Pep7 4 PEPS 4p11-q12 38

39.0 Recc1 4 RFC1 4p13-p14 38

a 40.0 W65100(a) 4 22148(u) 4 R D25250 50-56 38

40.0 Gabra2 4 GABRA2 4p12-p13 R WI-7294 61-62 38

40.0 Gabrb1 4 GABRB1 4p12-p13 G 38

40.0 Txk 4 TXK 4p12 38

a, b 41.0 Cncg 4 CNCG 4p13-p14 R 38

b 41.0 Tec 4 TEC 4p12 R SHGC-9639 60-62 38

41.0 Cenpc 4 CENPC 4q12-q13.3 38

b, c 42.0 Flk1 4 KDR 4q12 38

a, b, c 42.0 Kit 4 KIT 4q12 R,G 38

a, b, c 42.0 Pdgfra 4 PDGFRA 4q11-q12 G* 38

S Ugt2b5 4 UGT2B 4q13 38

c 44.0 Gnrhr 4 GNRHR 4q13.1-q21.1 R L03380 71-77 38

44.0 Ste 4 STE 4q13.1-q21.1 38

a 45.0 Csnb 4 CSN2 4p16.3-q21 R 38

46.0 Ambn 4 AMBN 4q 38

49.0 Amen 4 AMEN 4q 38

a 50.0 Afp 4 AFP 4q11-q13 R SHGC-10695 77-81 38

b, c 50.0 Alb1 4 ALB 4q11-q13 R,G A004G47 77-90 38

50.0 Gc 4 GC 4q12-q13 R,G 38

51.0 Areg 4 AREG 4q13-q21 R D4S3138 77-81 38

51.0 Btc 4 BTC 4q13-q21 38

S Igj 4 IGJ 4q21 R WI-18564 77-90 38

a 51.0 Mgsa 4 GRO1 4q21 G* 38

b 55.0 Bmp3(g) 4 BMP3 4p14-q21 38

b 55.0 Fgf5(g) 4 FGF5 4q21 R M23534 77-90 38

56.0 Dmp1 4 DMP1 4q21 38

56.0 Ibps 4 IBPS 4q21-25 38

56.0 Spp1(g) 4 SPP1 4q11-q21 R,G 38

a 57.0 Pdeb 4* PDE6B 4p16.3 37

57.0 Dagk4 4* DAGK4 4p16.3 37

57.0 Idua 4* IDUA 4p16.3 37

b 56.0 Gfi1 1 GFI1 1p22 3

a 56.0 AA124718(a) 1 1649(u) 1 R WI-9122 129-132 3

a 56.0 AA155193(a) 1 25505(u) 1 R 25505 131 3

59.0 Crybb4 22 CRYBB4 22q11.2-q12.1 X 189

59.0 Crybb1 22 CRYBB1 22q11.2-q12.1 189

60.0 Crybb3 22 CRYBB3 22q11.2-q12.1 X 189

60.0 Crybb2 22 CRYBB2 22q11.2-q12.1 R,X,G stCRYB2A 9-16 189

b 60.0 Adrbk2 22 ADRBK2 22q11 189

65.0 Acads 12 ACADS 12q22-qter 125

65.0 Tcf1 12 TCF1 12q24.3 125

65.0 Dao1 12 DAO 12q24.3 125

S Cenpc 12 CENPC 12 125

70.0 Nos1 12 NOS1 12q24.2-q24.3 R SGC31491 126-133 125

b 72.0 Eln 7* ELN 7q11.23 75

72.0 Gus 7* GUSB 7q22 P,R WI-9137 77-79 75

72.0 Phkg 7* PHKG1 7p12-q21 75

b S Asl 7* ASL 7q21.3-q22.1 P 75

76.0 Ncf1 7* NCF1 7q11.23 P 75

76.0 Gnb2 7* GNB2 7q21.3-q22.1 75

78.0 Lmk1 7* LMK1 7q11.23 75

b, c 79.0 Zp3 7* ZP3 7 P 75

79.0 Ocm 7* OCM 7p13-p11 P 78

a, b 80.0 Epo 7* EPO 7q21.3-q22.1 P,C 78

80.0 Pcolce 7* PCOLCE 7q21.3-q22 78

80.0 Azgp1 7* AZGP1 7q22.1 P 78

80.0 Cutl1 7* CUTL1 7q22.1 P 78

80.0 Mor1 7* MDH2 7p13-q22 78

80.0 Ache 7* ACHE 7q22 C 78

82.0 Cyp3a11 7* CYP3A 7q21.3-q22.1 78

85.0 D5Kyo2 7* PLANH1 7q21.3-q22 C,G 78

a, b 84.0 Pdgfa 7* PDGFA 7p22 R,X SHGC-10715 <1 68

84.0 Prkar1b 7* PRKAR1B 7pter-p22 68

85.0 Pms2 7* PMSL2 7p22 R,X WI-16837 7-10 68

b 85.0 Flt1 13 FLT1 13q12 R 126

b 85.0 Flt3 13 FLT3 13q12 126

88.0 Atrc1 13 ATRC1 13q12.3 G 126

Cross	Mouse Locus	Mouse Gene	Human Chr.	Human Gene	In Situ	Method	RH Map	Genethon Map	Homology Group
	1.0	Gnai1	7	GNAI1	7q21-q22				77
	1.0	Pgy1	7	PGY1	7q21-q22	P,C			77
	1.0	Pgy3	7	PGY3	7q21-q22	P,G			77
	1.0	Sri	7	SRI	7q21				77
	4.0	Cchl2a	7	CCHL2A	7q21-q22	P			77
a, b	4.0	Hgf	7	HGF	7q21.1	P			77
	8.0	Rln	7	RELN	7q22	P,R	SHGC-32029	114-119	77
c	9.0	Nos3	7*	NOS3	7q35-q36	R	SHGC-11213	163	81
	12.0	Cdk5	7*	CDK5	7q36	R	SGC30025	167-175	81
	12.0	Dpp6	7*	DPP6	7				81
	14.0	Ae2	7*	SLC4A2	7q35-q36				81
	15.0	Htr5a	7*	HTR5A	7q35-q36				81
b	15.0	En2	7*	EN2	7q36	P,G			81
	16.0	Shh	7*	SHH	7q36				81
a, b	17.0	Il6	7	IL6	7p21-p15	P,R,G	SHGC-9784	36-39	70
	18.0	Tyms	18	TYMS	18p11.3				153
	18.0	Lrpap1	4	LRPAP1	4p16.3				38
	20.0	Gprk2l	4	GPRK2L	4p16.3				38
b	20.0	D5H4S43	4	D4S43	4p16.3				38
b	20.0	Fgfr3	4	FGFR3	4p16.3	R	X84939	0	38
	20.0	Adra2c	4	ADRA2C	4p16.3-p15	R,G	SHGC-13378	6-12	38
	20.0	Add1	4	ADD1	4p16.3				38
	21.0	Hdh	4	HD	4p16.3				38
b	21.0	Msx1	4	MSX1	4p16.3-p16.1	G			38
	22.0	D5H4S115	4	D4S115	4p16.3				38
	23.0	D5H4S62	4	D4S62	4p16.2-p16.1				38
b	23.0	Drd5	4	DRD5	4p15.3-p15.1	R			38
	28.0	Cd38	4	CD38	4	R	SGC31590	24-32	38
a	30.0	Qdpr	4	QDPR	4p15.3				38
	33.0	D5H4S76	4	D4S76	4p16.2-p15.1				38
	33.0	D5H4S80	4	D4S80	4p16.2-p15.1				38
c	34.0	Cckar	4	CCKAR	4	R	SHGC12838	38-43	38
	38.0	Pgm1	4	PGM2	4p14-q12				38
	39.0	Pep7	4	PEPS	4p11-q12				38
	39.0	Recc1	4	RFC1	4p13-p14				38
a	40.0	W65100(a)	4	22148(u)	4	R	D25250	50-56	38
	40.0	Gabra2	4	GABRA2	4p12-p13	R	WI-7294	61-62	38
	40.0	Gabrb1	4	GABRB1	4p12-p13	G			38
	40.0	Txk	4	TXK	4p12				38
a, b	41.0	Cncg	4	CNCG	4p13-p14	R			38
b	41.0	Tec	4	TEC	4p12	R	SHGC-9639	60-62	38
	41.0	Cenpc	4	CENPC	4q12-q13.3				38
b, c	42.0	Flk1	4	KDR	4q12				38
a, b, c	42.0	Kit	4	KIT	4q12	R,G			38
a, b, c	42.0	Pdgfra	4	PDGFRA	4q11-q12	G*			38
	S	Ugt2b5	4	UGT2B	4q13				38
c	44.0	Gnrhr	4	GNRHR	4q13.1-q21.1	R	L03380	71-77	38
	44.0	Ste	4	STE	4q13.1-q21.1				38
a	45.0	Csnb	4	CSN2	4p16.3-q21	R			38
	46.0	Ambn	4	AMBN	4q				38
	49.0	Amen	4	AMEN	4q				38
a	50.0	Afp	4	AFP	4q11-q13	R	SHGC-10695	77-81	38
b, c	50.0	Alb1	4	ALB	4q11-q13	R,G	A004G47	77-90	38
	50.0	Gc	4	GC	4q12-q13	R,G			38
	51.0	Areg	4	AREG	4q13-q21	R	D4S3138	77-81	38
	51.0	Btc	4	BTC	4q13-q21				38
	S	Igj	4	IGJ	4q21	R	WI-18564	77-90	38
a	51.0	Mgsa	4	GRO1	4q21	G*			38
b	55.0	Bmp3(g)	4	BMP3	4p14-q21				38
b	55.0	Fgf5(g)	4	FGF5	4q21	R	M23534	77-90	38
	56.0	Dmp1	4	DMP1	4q21				38
	56.0	Ibps	4	IBPS	4q21-25				38
	56.0	Spp1(g)	4	SPP1	4q11-q21	R,G			38
a	57.0	Pdeb	4*	PDE6B	4p16.3				37
	57.0	Dagk4	4*	DAGK4	4p16.3				37
	57.0	Idua	4*	IDUA	4p16.3				37
b	56.0	Gfi1	1	GFI1	1p22				3
a	56.0	AA124718(a)	1	1649(u)	1	R	WI-9122	129-132	3
a	56.0	AA155193(a)	1	25505(u)	1	R	25505	131	3
	59.0	Crybb4	22	CRYBB4	22q11.2-q12.1	X			189
	59.0	Crybb1	22	CRYBB1	22q11.2-q12.1				189
	60.0	Crybb3	22	CRYBB3	22q11.2-q12.1	X			189
	60.0	Crybb2	22	CRYBB2	22q11.2-q12.1	R,X,G	stCRYB2A	9-16	189
b	60.0	Adrbk2	22	ADRBK2	22q11				189
	65.0	Acads	12	ACADS	12q22-qter				125
	65.0	Tcf1	12	TCF1	12q24.3				125
	65.0	Dao1	12	DAO	12q24.3				125
	S	Cenpc	12	CENPC	12				125
	70.0	Nos1	12	NOS1	12q24.2-q24.3	R	SGC31491	126-133	125
b	72.0	Eln	7*	ELN	7q11.23				75
	72.0	Gus	7*	GUSB	7q22	P,R	WI-9137	77-79	75
	72.0	Phkg	7*	PHKG1	7p12-q21				75
b	S	Asl	7*	ASL	7q21.3-q22.1	P			75
	76.0	Ncf1	7*	NCF1	7q11.23	P			75
	76.0	Gnb2	7*	GNB2	7q21.3-q22.1				75
	78.0	Lmk1	7*	LMK1	7q11.23				75
b, c	79.0	Zp3	7*	ZP3	7	P			75
	79.0	Ocm	7*	OCM	7p13-p11	P			78
a, b	80.0	Epo	7*	EPO	7q21.3-q22.1	P,C			78
	80.0	Pcolce	7*	PCOLCE	7q21.3-q22				78
	80.0	Azgp1	7*	AZGP1	7q22.1	P			78
	80.0	Cutl1	7*	CUTL1	7q22.1	P			78
	80.0	Mor1	7*	MDH2	7p13-q22				78
	80.0	Ache	7*	ACHE	7q22	C			78
	82.0	Cyp3a11	7*	CYP3A	7q21.3-q22.1				78
	85.0	D5Kyo2	7*	PLANH1	7q21.3-q22	C,G			78
a, b	84.0	Pdgfa	7*	PDGFA	7p22	R,X	SHGC-10715	<1	68
	84.0	Prkar1b	7*	PRKAR1B	7pter-p22				68
	85.0	Pms2	7*	PMSL2	7p22	R,X	WI-16837	7-10	68
b	85.0	Flt1	13	FLT1	13q12	R			126
b	85.0	Flt3	13	FLT3	13q12				126
	88.0	Atrc1	13	ATRC1	13q12.3	G			126

Human/Mouse Homology Mapping Methods

Method	Description
C	High-resolution cytogenetic methods
G	Genetic linkage mapping
G*	Genetic mapping, with disagreements between genetic and physical map resolved in favor of physical map
L	Long-range restriction site mapping
P	Multiple physical methods, including YAC and cosmid contigs
R	Radiation hybrid mapping
X	Multiple sources of high-resolution data

Gene Notes:

Key	Description
a	Gene Bank Accession Number for Mouse EST
b	Gene order has been changed from that shown in the chromosome committee reports or online databases, as required by high-resolution human physical mapping data; these data also indicate a probable difference between human and mouse organization, e.g. a small inversion in one species
g	Mouse gene order has been changed slightly to conform with human gene order in the absence of conflicting high resolution data
y	Position has been changed from that reported in chromosome committee report or or Mouse Genome Database based on additional data or review of previous data
p	Different sources of high resolution mapping data give conflicting positions
r	Difference between position in inbred mice vs. Mus spretus
u	This is a UniGene designation, given since no gene symbol has been assigned. Note: some of these designations may be retired.

Mouse Locus Notes

The notation S in the Mouse Locus column indicates a gene that is syntenic, but for which there is not enough data to assign a precise position.

Cross Information

The cross column indicates which laboratory mapped a given cross.

a - Duke/Davis cross

b - Frederick cross

c - Jackson Lab cross

RH Notes

This field contains the marker identification used in Radiation Hybrid Mapping. These hyperlinks will connect the user to the Gene Map of the Human Genome. Subsequent hyperlinks on the marker will provide marker details and hyperlink to the actual Human Gene Map region (by selecting the interval defined by the Genethon Map loci intervals). Therefore the user can rapidly obtain information on ESTs that have

Color Key for Homology Map

Human Chr.	Human Chr.	Human Chr.	Human Chr.	Human Chr.	Human Chr.
1	2	3	4	5	6
7	8	9	10	11	12
13	14	15	16	17	18
19	X

The asterisk character ('*') is used to indicate a different region of homology on the same human chromosome.

A question mark ('?') indicates that the authors are uncertain that this region is truly homologous.